RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 C17orf53Q8N3J3 647 aaPredicted RBP5.43□□□□□ -1.54
SYCP1-209ENST00000613524 CAGE1Q8TC20 777 aa5.43□□□□□ -1.54
SYCP1-209ENST00000613524 WNT2BQ93097 391 aa5.43□□□□□ -1.54
SYCP1-209ENST00000613524 MTMR9Q96QG7 549 aa5.43□□□□□ -1.54
SYCP1-209ENST00000613524 GCOM2Q9BZD3 368 aaPredicted RBP5.43□□□□□ -1.54
SYCP1-209ENST00000613524 CXCL16Q9H2A7 254 aa5.43□□□□□ -1.54
SYCP1-209ENST00000613524 PCIF1Q9H4Z3 704 aa5.43□□□□□ -1.54
SYCP1-209ENST00000613524 PCDHB7Q9Y5E2 793 aa5.43□□□□□ -1.54
SYCP1-209ENST00000613524 EMSYQ7Z589 1322 aa5.43□□□□□ -1.54
SYCP1-209ENST00000613524 DNAH14Q0VDD8 3507 aa5.43□□□□□ -1.54
SYCP1-209ENST00000613524 TCF20Q9UGU0 1960 aaKnown RBP5.43□□□□□ -1.54
SYCP1-209ENST00000613524 RBBP6Q7Z6E9 1792 aaKnown RBP5.43□□□□□ -1.54
SYCP1-209ENST00000613524 NID2Q14112 1375 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 GON4LQ3T8J9 2241 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 GOLGA8IPA6NC78 632 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 CASTOR2A6NHX0 329 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 GOLGA8JA6NMD2 632 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 AMHP03971 560 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 NMT1P30419 496 aaKnown RBP5.42□□□□□ -1.54
SYCP1-209ENST00000613524 ASIC1P78348 528 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 CAPSQ13938 189 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 NOLC1Q14978 699 aaKnown RBP eCLIP5.42□□□□□ -1.54
SYCP1-209ENST00000613524 ZNF484Q5JVG2 852 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 ALKBH2Q6NS38 261 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 GK5Q6ZS86 529 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 ZNF438Q7Z4V0 828 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 RTN4RL1Q86UN2 441 aaPredicted RBP5.42□□□□□ -1.54
SYCP1-209ENST00000613524 GLIS3Q8NEA6 775 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 LRRC15Q8TF66 581 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 VWCEQ96DN2 955 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 FAM167AQ96KS9 214 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 CITED4Q96RK1 184 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 GAD1Q99259 594 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 CDX2Q99626 313 aaPredicted RBP5.42□□□□□ -1.54
SYCP1-209ENST00000613524 TARS2Q9BW92 718 aaKnown RBP5.42□□□□□ -1.54
SYCP1-209ENST00000613524 SLC6A16Q9GZN6 736 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 CHRDQ9H2X0 955 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 NXF3Q9H4D5 531 aaKnown RBP5.42□□□□□ -1.54
SYCP1-209ENST00000613524 GOLGA2P5Q9HBQ8 144 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 XPNPEP1Q9NQW7 623 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.42□□□□□ -1.54
SYCP1-209ENST00000613524 PCDHA2Q9Y5H9 948 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 ZNF236Q9UL36 1845 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 CYP3A7-CYP3A51PA0A087WV96 503 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 A0A087X0B3 334 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 CCDC189A1A4V9 331 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 K7ENM7 598 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 TBCAO75347 108 aaKnown RBP5.42□□□□□ -1.54
SYCP1-209ENST00000613524 PTMAP06454 111 aaKnown RBP5.42□□□□□ -1.54
SYCP1-209ENST00000613524 GLRA2P23416 452 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 CYP3A7P24462 503 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 MLH1P40692 756 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 PLA2G4AP47712 749 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 OR1G1P47890 313 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 GUCY2FP51841 1108 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 PTPN5P54829 565 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 PPP2R5CQ13362 524 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 BIRC2Q13490 618 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 PLEKHG4Q58EX7 1191 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 HSP90AA4PQ58FG1 418 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 YOD1Q5VVQ6 348 aaPredicted RBP5.42□□□□□ -1.54
SYCP1-209ENST00000613524 PLPP4Q5VZY2 271 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 LMBRD2Q68DH5 695 aaPredicted RBP5.42□□□□□ -1.54
SYCP1-209ENST00000613524 C6orf15Q6UXA7 325 aaPredicted RBP5.42□□□□□ -1.54
SYCP1-209ENST00000613524 SAMD3Q8N6K7 520 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 USP38Q8NB14 1042 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 LINC01599Q8WXQ3 324 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 IFT74Q96LB3 600 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 NECAB3Q96P71 396 aaPredicted RBP5.42□□□□□ -1.54
SYCP1-209ENST00000613524 NACC1Q96RE7 527 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 MMTAG2Q9BU76 263 aaKnown RBP5.42□□□□□ -1.54
SYCP1-209ENST00000613524 KCNF1Q9H3M0 494 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 TMX1Q9H3N1 280 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 KMT5AQ9NQR1 393 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 USP34Q70CQ2 3546 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 IGSF9BQ9UPX0 1349 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 LETM1O95202 739 aaPredicted RBP5.42□□□□□ -1.54
SYCP1-209ENST00000613524 TRIM71Q2Q1W2 868 aaKnown RBP5.42□□□□□ -1.54
SYCP1-209ENST00000613524 HERC4Q5GLZ8 1057 aaPredicted RBP5.42□□□□□ -1.54
SYCP1-209ENST00000613524 EEF1DP3Q658K8 133 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 MCTP2Q6DN12 878 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 CNKSR3Q6P9H4 555 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 TSHZ1Q6ZSZ6 1077 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 NIPA1Q7RTP0 329 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 TMEM192Q8IY95 271 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 SMYD4Q8IYR2 804 aaPredicted RBP5.42□□□□□ -1.54
SYCP1-209ENST00000613524 SYCP3Q8IZU3 236 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 FSIP1Q8NA03 581 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 SLC17A8Q8NDX2 589 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 ZNF396Q96N95 335 aaPredicted RBP5.42□□□□□ -1.54
SYCP1-209ENST00000613524 PNMA5Q96PV4 448 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 HSD17B14Q9BPX1 270 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 TYW1Q9NV66 732 aaKnown RBP5.42□□□□□ -1.54
SYCP1-209ENST00000613524 PCDHB5Q9Y5E4 795 aa5.42□□□□□ -1.54
SYCP1-209ENST00000613524 K7ERI5 159 aa5.41□□□□□ -1.54
SYCP1-209ENST00000613524 GCNT3O95395 438 aa5.41□□□□□ -1.54
SYCP1-209ENST00000613524 SCGB1D2O95969 90 aa5.41□□□□□ -1.54
SYCP1-209ENST00000613524 MYCLP1P12525 358 aaPredicted RBP5.41□□□□□ -1.54
SYCP1-209ENST00000613524 IGFBP6P24592 240 aaPredicted RBP5.41□□□□□ -1.54
SYCP1-209ENST00000613524 SCNN1GP51170 649 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms