RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 HVCN1Q96D96 273 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 IFT43Q96FT9 208 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 GCNAQ96QF7 691 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 GTSE1Q9NYZ3 720 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 ZFP69BQ9UJL9 534 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 KCNN4O15554 427 aa13.19□□□□□ -0.3
TNFAIP3-206ENST00000612899 PHF2O75151 1096 aa13.19□□□□□ -0.3
TNFAIP3-206ENST00000612899 P3H1Q32P28 736 aa13.19□□□□□ -0.3
TNFAIP3-206ENST00000612899 MFSD14CQ5VZR4 134 aa13.19□□□□□ -0.3
TNFAIP3-206ENST00000612899 BTBD8Q5XKL5 378 aa13.19□□□□□ -0.3
TNFAIP3-206ENST00000612899 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.19□□□□□ -0.3
TNFAIP3-206ENST00000612899 NAGPAQ9UK23 515 aa13.19□□□□□ -0.3
TNFAIP3-206ENST00000612899 SPECC1L-ADORA2AF8WAN1 911 aa13.19□□□□□ -0.3
TNFAIP3-206ENST00000612899 APOL1O14791 398 aa13.19□□□□□ -0.3
TNFAIP3-206ENST00000612899 ICAM1P05362 532 aa13.19□□□□□ -0.3
TNFAIP3-206ENST00000612899 CPB1P15086 417 aa13.19□□□□□ -0.3
TNFAIP3-206ENST00000612899 CYP2B6P20813 491 aa13.19□□□□□ -0.3
TNFAIP3-206ENST00000612899 BYSLQ13895 437 aaKnown RBP13.19□□□□□ -0.3
TNFAIP3-206ENST00000612899 ATF7IP2Q5U623 682 aa13.19□□□□□ -0.3
TNFAIP3-206ENST00000612899 SCFD2Q8WU76 684 aa13.19□□□□□ -0.3
TNFAIP3-206ENST00000612899 SCG3Q8WXD2 468 aaKnown RBP13.19□□□□□ -0.3
TNFAIP3-206ENST00000612899 RAB6BQ9NRW1 208 aa13.19□□□□□ -0.3
TNFAIP3-206ENST00000612899 WDR35Q9P2L0 1181 aa13.19□□□□□ -0.3
TNFAIP3-206ENST00000612899 KPNA7A9QM74 516 aa13.19□□□□□ -0.3
TNFAIP3-206ENST00000612899 AP5Z1O43299 807 aa13.19□□□□□ -0.3
TNFAIP3-206ENST00000612899 DIAPH2O60879 1101 aa13.19□□□□□ -0.3
TNFAIP3-206ENST00000612899 EZH2Q15910 746 aaKnown RBP13.19□□□□□ -0.3
TNFAIP3-206ENST00000612899 EFCAB12Q6NXP0 572 aa13.19□□□□□ -0.3
TNFAIP3-206ENST00000612899 DEFB132Q7Z7B7 95 aa13.19□□□□□ -0.3
TNFAIP3-206ENST00000612899 RCOR2Q8IZ40 523 aa13.19□□□□□ -0.3
TNFAIP3-206ENST00000612899 PRPF31Q8WWY3 499 aaKnown RBP13.19□□□□□ -0.3
TNFAIP3-206ENST00000612899 MAGEB2O15479 319 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 HAUS5O94927 633 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 GH1P01241 217 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 SKIP12755 728 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 ARFIP2P53365 341 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 PRAMEP78395 509 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 CDK17Q00537 523 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 KYAT1Q16773 422 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 KIF19Q2TAC6 998 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 TRIM65Q6PJ69 517 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 KDELC2Q7Z4H8 507 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 JAMLQ86YT9 394 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 SPDYE1Q8NFV5 336 aaPredicted RBP13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 URGCPQ8TCY9 931 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 BTBD6Q96KE9 485 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 SERPINI1Q99574 410 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 SMYD3Q9H7B4 428 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 ETNK1Q9HBU6 452 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 SARS2Q9NP81 518 aaKnown RBP13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 COL3A1P02461 1466 aaPredicted RBP13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 FOXN3O00409 490 aaPredicted RBP13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 NSUN2Q08J23 767 aaKnown RBP eCLIP13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 SNAPC2Q13487 334 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 STAT4Q14765 748 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 GPAT2Q6NUI2 795 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 SLC30A10Q6XR72 485 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 RNF135Q8IUD6 432 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 CBWD2Q8IUF1 395 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 ZFATQ9P243 1243 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 PAIP2BQ9ULR5 123 aaKnown RBP13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 TRIM66O15016 1216 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 ZFXP17010 805 aaPredicted RBP13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 GTF2H1P32780 548 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 RFC5P40937 340 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 MDM2Q00987 491 aaPredicted RBP13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 LONRF1Q17RB8 773 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 ITPRIPL1Q6GPH6 555 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 KCTD17Q8N5Z5 321 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 LACRTQ9GZZ8 138 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 SEMA6BQ9H3T3 888 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 HPCAL4Q9UM19 191 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 TBX20Q9UMR3 447 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 SLC8A2Q9UPR5 921 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 SREBF1P36956 1147 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 PPARGP37231 505 aaPredicted RBP13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 RECQLP46063 649 aaPredicted RBP13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 CAPRIN2Q6IMN6 1127 aaKnown RBP13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 NOP9Q86U38 636 aaKnown RBP13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 USP38Q8NB14 1042 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 IL17RBQ9NRM6 502 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 FGFR1OP2Q9NVK5 253 aa13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.18□□□□□ -0.3
TNFAIP3-206ENST00000612899 APOEP02649 317 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 PDE1CQ14123 709 aaPredicted RBP13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 SMTNL2Q2TAL5 461 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 APPL2Q8NEU8 664 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 PGBD4Q96DM1 585 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 CBWD1Q9BRT8 395 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 SP110Q9HB58 689 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 GGT7Q9UJ14 662 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 DBR1Q9UK59 544 aaKnown RBP13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 MAP3K7O43318 606 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 CDH16O75309 829 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 CRYMQ14894 314 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 KYNUQ16719 465 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 C2CD6Q53TS8 623 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 IER5Q5VY09 327 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 XRRA1Q6P2D8 792 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms