RNA–Protein interactions for RNA: ENST00000598923.1

SNRPA-205, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-205ENST00000598923 MTMR3Q13615 1198 aa20.25■□□□□ 0.83
SNRPA-205ENST00000598923 XKR4Q5GH76 650 aa20.25■□□□□ 0.83
SNRPA-205ENST00000598923 ZBTB41Q5SVQ8 909 aa20.25■□□□□ 0.83
SNRPA-205ENST00000598923 SLC39A4Q6P5W5 647 aa20.25■□□□□ 0.83
SNRPA-205ENST00000598923 C15orf39Q6ZRI6 1047 aa20.25■□□□□ 0.83
SNRPA-205ENST00000598923 CEP57Q86XR8 500 aa20.25■□□□□ 0.83
SNRPA-205ENST00000598923 PLCD3Q8N3E9 789 aa20.25■□□□□ 0.83
SNRPA-205ENST00000598923 TDRD5Q8NAT2 981 aaKnown RBP20.25■□□□□ 0.83
SNRPA-205ENST00000598923 FAM212AQ96EL1 285 aa20.25■□□□□ 0.83
SNRPA-205ENST00000598923 ACCSQ96QU6 501 aa20.25■□□□□ 0.83
SNRPA-205ENST00000598923 TRIM9Q9C026 710 aa20.25■□□□□ 0.83
SNRPA-205ENST00000598923 BLZF1Q9H2G9 400 aa20.25■□□□□ 0.83
SNRPA-205ENST00000598923 PCDHB13Q9Y5F0 798 aa20.25■□□□□ 0.83
SNRPA-205ENST00000598923 MEFVO15553 781 aaPredicted RBP20.24■□□□□ 0.83
SNRPA-205ENST00000598923 B3GAT3O94766 335 aa20.24■□□□□ 0.83
SNRPA-205ENST00000598923 ADH1AP07327 375 aa20.24■□□□□ 0.83
SNRPA-205ENST00000598923 IGFBP6P24592 240 aaPredicted RBP20.24■□□□□ 0.83
SNRPA-205ENST00000598923 CASP1P29466 404 aa20.24■□□□□ 0.83
SNRPA-205ENST00000598923 CASP5P51878 434 aa20.24■□□□□ 0.83
SNRPA-205ENST00000598923 VCPP55072 806 aaKnown RBP20.24■□□□□ 0.83
SNRPA-205ENST00000598923 NUCB2P80303 420 aa20.24■□□□□ 0.83
SNRPA-205ENST00000598923 SOX4Q06945 474 aaPredicted RBP20.24■□□□□ 0.83
SNRPA-205ENST00000598923 KCNA1Q09470 495 aa20.24■□□□□ 0.83
SNRPA-205ENST00000598923 USP41Q3LFD5 358 aa20.24■□□□□ 0.83
SNRPA-205ENST00000598923 ADALQ6DHV7 355 aa20.24■□□□□ 0.83
SNRPA-205ENST00000598923 DCLRE1AQ6PJP8 1040 aa20.24■□□□□ 0.83
SNRPA-205ENST00000598923 CEP57L1Q8IYX8 460 aa20.24■□□□□ 0.83
SNRPA-205ENST00000598923 SYCP3Q8IZU3 236 aa20.24■□□□□ 0.83
SNRPA-205ENST00000598923 CMASQ8NFW8 434 aaPredicted RBP20.24■□□□□ 0.83
SNRPA-205ENST00000598923 RIN2Q8WYP3 895 aaPredicted RBP20.24■□□□□ 0.83
SNRPA-205ENST00000598923 HPS3Q969F9 1004 aa20.24■□□□□ 0.83
SNRPA-205ENST00000598923 C18orf25Q96B23 403 aaPredicted RBP20.24■□□□□ 0.83
SNRPA-205ENST00000598923 PRRX2Q99811 253 aa20.24■□□□□ 0.83
SNRPA-205ENST00000598923 RPF1Q9H9Y2 349 aaKnown RBP20.24■□□□□ 0.83
SNRPA-205ENST00000598923 GDPD2Q9HCC8 539 aa20.24■□□□□ 0.83
SNRPA-205ENST00000598923 SLC38A7Q9NVC3 462 aa20.24■□□□□ 0.83
SNRPA-205ENST00000598923 CNTN3Q9P232 1028 aa20.24■□□□□ 0.83
SNRPA-205ENST00000598923 LIMD1Q9UGP4 676 aa20.24■□□□□ 0.83
SNRPA-205ENST00000598923 SERTAD1Q9UHV2 236 aa20.24■□□□□ 0.83
SNRPA-205ENST00000598923 EXOC7Q9UPT5 735 aa20.24■□□□□ 0.83
SNRPA-205ENST00000598923 A0A0B4J269 797 aa20.23■□□□□ 0.83
SNRPA-205ENST00000598923 FRMD3A2A2Y4 597 aa20.23■□□□□ 0.83
SNRPA-205ENST00000598923 OGTO15294 1046 aa20.23■□□□□ 0.83
SNRPA-205ENST00000598923 PRPF6O94906 941 aaKnown RBP20.23■□□□□ 0.83
SNRPA-205ENST00000598923 PAPLNO95428 1278 aa20.23■□□□□ 0.83
SNRPA-205ENST00000598923 C1RP00736 705 aa20.23■□□□□ 0.83
SNRPA-205ENST00000598923 ASGR2P07307 311 aa20.23■□□□□ 0.83
SNRPA-205ENST00000598923 KCNE1P15382 129 aa20.23■□□□□ 0.83
SNRPA-205ENST00000598923 AVPR2P30518 371 aa20.23■□□□□ 0.83
SNRPA-205ENST00000598923 KYAT1Q16773 422 aa20.23■□□□□ 0.83
SNRPA-205ENST00000598923 L1TD1Q5T7N2 865 aaKnown RBP20.23■□□□□ 0.83
SNRPA-205ENST00000598923 FAM171A1Q5VUB5 890 aa20.23■□□□□ 0.83
SNRPA-205ENST00000598923 GPR65Q8IYL9 337 aa20.23■□□□□ 0.83
SNRPA-205ENST00000598923 POMGNT1Q8WZA1 660 aa20.23■□□□□ 0.83
SNRPA-205ENST00000598923 HVCN1Q96D96 273 aa20.23■□□□□ 0.83
SNRPA-205ENST00000598923 UROC1Q96N76 676 aa20.23■□□□□ 0.83
SNRPA-205ENST00000598923 C7orf25Q9BPX7 421 aa20.23■□□□□ 0.83
SNRPA-205ENST00000598923 FGFBP2Q9BYJ0 223 aa20.23■□□□□ 0.83
SNRPA-205ENST00000598923 RHOBTB2Q9BYZ6 727 aa20.23■□□□□ 0.83
SNRPA-205ENST00000598923 SCAND2PQ9GZW5 306 aaPredicted RBP20.23■□□□□ 0.83
SNRPA-205ENST00000598923 SMOC2Q9H3U7 446 aa20.23■□□□□ 0.83
SNRPA-205ENST00000598923 MAN1C1Q9NR34 630 aa20.23■□□□□ 0.83
SNRPA-205ENST00000598923 OLFML3Q9NRN5 406 aa20.23■□□□□ 0.83
SNRPA-205ENST00000598923 SF3B1O75533 1304 aaKnown RBP eCLIP20.23■□□□□ 0.83
SNRPA-205ENST00000598923 SPDYE4A6NLX3 237 aa20.22■□□□□ 0.83
SNRPA-205ENST00000598923 LACTBL1A8MY62 500 aa20.22■□□□□ 0.83
SNRPA-205ENST00000598923 PPP1R37O75864 691 aa20.22■□□□□ 0.83
SNRPA-205ENST00000598923 PDGFBP01127 241 aaPredicted RBP20.22■□□□□ 0.83
SNRPA-205ENST00000598923 PFKFB1P16118 471 aa20.22■□□□□ 0.83
SNRPA-205ENST00000598923 CMA1P23946 247 aa20.22■□□□□ 0.83
SNRPA-205ENST00000598923 ACOT2P49753 483 aa20.22■□□□□ 0.83
SNRPA-205ENST00000598923 MRE11P49959 708 aa20.22■□□□□ 0.83
SNRPA-205ENST00000598923 PPP2R3AQ06190 1150 aa20.22■□□□□ 0.83
SNRPA-205ENST00000598923 SLFN12LQ6IEE8 588 aa20.22■□□□□ 0.83
SNRPA-205ENST00000598923 GLYCTKQ8IVS8 523 aa20.22■□□□□ 0.83
SNRPA-205ENST00000598923 GRAMD1CQ8IYS0 662 aa20.22■□□□□ 0.83
SNRPA-205ENST00000598923 KIF12Q96FN5 646 aa20.22■□□□□ 0.83
SNRPA-205ENST00000598923 DDX27Q96GQ7 796 aaKnown RBP20.22■□□□□ 0.83
SNRPA-205ENST00000598923 PYM1Q9BRP8 204 aaKnown RBP20.22■□□□□ 0.83
SNRPA-205ENST00000598923 STRA6Q9BX79 667 aa20.22■□□□□ 0.83
SNRPA-205ENST00000598923 MAGEF1Q9HAY2 307 aa20.22■□□□□ 0.83
SNRPA-205ENST00000598923 DOCK8Q8NF50 2099 aa20.22■□□□□ 0.83
SNRPA-205ENST00000598923 VWA8A3KMH1 1905 aa20.21■□□□□ 0.83
SNRPA-205ENST00000598923 PODXLO00592 558 aa20.21■□□□□ 0.83
SNRPA-205ENST00000598923 GLUD1P00367 558 aa20.21■□□□□ 0.83
SNRPA-205ENST00000598923 RPL17P18621 184 aaKnown RBP20.21■□□□□ 0.83
SNRPA-205ENST00000598923 BRCC3P46736 316 aa20.21■□□□□ 0.83
SNRPA-205ENST00000598923 PTPN5P54829 565 aa20.21■□□□□ 0.83
SNRPA-205ENST00000598923 TCF15Q12870 199 aa20.21■□□□□ 0.83
SNRPA-205ENST00000598923 ENOX2Q16206 610 aaKnown RBP20.21■□□□□ 0.83
SNRPA-205ENST00000598923 UPP1Q16831 310 aa20.21■□□□□ 0.83
SNRPA-205ENST00000598923 PRSS55Q6UWB4 352 aaPredicted RBP20.21■□□□□ 0.83
SNRPA-205ENST00000598923 CYP26C1Q6V0L0 522 aa20.21■□□□□ 0.83
SNRPA-205ENST00000598923 CCDC149Q6ZUS6 474 aa20.21■□□□□ 0.83
SNRPA-205ENST00000598923 OTOP3Q7RTS5 596 aa20.21■□□□□ 0.83
SNRPA-205ENST00000598923 GLIS3Q8NEA6 775 aa20.21■□□□□ 0.83
SNRPA-205ENST00000598923 HDAC7Q8WUI4 952 aa20.21■□□□□ 0.83
SNRPA-205ENST00000598923 ACSF2Q96CM8 615 aaPredicted RBP20.21■□□□□ 0.83
SNRPA-205ENST00000598923 TTPALQ9BTX7 342 aa20.21■□□□□ 0.83
SNRPA-205ENST00000598923 PLEKHA5Q9HAU0 1116 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms