RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 MYO10Q9HD67 2058 aa24.33■■□□□ 1.48
GTF2F1-204ENST00000594965 DOCK6Q96HP0 2047 aa24.32■■□□□ 1.48
GTF2F1-204ENST00000594965 LACTBL1A8MY62 500 aa24.32■■□□□ 1.48
GTF2F1-204ENST00000594965 ADAM12O43184 909 aa24.32■■□□□ 1.48
GTF2F1-204ENST00000594965 DCXO43602 365 aa24.32■■□□□ 1.48
GTF2F1-204ENST00000594965 TKTP29401 623 aaKnown RBP24.32■■□□□ 1.48
GTF2F1-204ENST00000594965 RPL9P32969 192 aaKnown RBP24.32■■□□□ 1.48
GTF2F1-204ENST00000594965 CREMQ03060 361 aa24.32■■□□□ 1.48
GTF2F1-204ENST00000594965 KYAT1Q16773 422 aa24.32■■□□□ 1.48
GTF2F1-204ENST00000594965 HERC4Q5GLZ8 1057 aaPredicted RBP24.32■■□□□ 1.48
GTF2F1-204ENST00000594965 ATAT1Q5SQI0 421 aa24.32■■□□□ 1.48
GTF2F1-204ENST00000594965 PANK4Q9NVE7 773 aa24.32■■□□□ 1.48
GTF2F1-204ENST00000594965 PAPLNO95428 1278 aa24.31■■□□□ 1.48
GTF2F1-204ENST00000594965 ALADP13716 330 aa24.31■■□□□ 1.48
GTF2F1-204ENST00000594965 SP100P23497 879 aaPredicted RBP24.31■■□□□ 1.48
GTF2F1-204ENST00000594965 ME1P48163 572 aa24.31■■□□□ 1.48
GTF2F1-204ENST00000594965 RESP18Q5W5W9 173 aa24.31■■□□□ 1.48
GTF2F1-204ENST00000594965 CMASQ8NFW8 434 aaPredicted RBP24.31■■□□□ 1.48
GTF2F1-204ENST00000594965 HDAC7Q8WUI4 952 aa24.31■■□□□ 1.48
GTF2F1-204ENST00000594965 CUEDC2Q9H467 287 aa24.31■■□□□ 1.48
GTF2F1-204ENST00000594965 RPF1Q9H9Y2 349 aaKnown RBP24.31■■□□□ 1.48
GTF2F1-204ENST00000594965 RFPL2O75678 378 aa24.3■■□□□ 1.48
GTF2F1-204ENST00000594965 GCNT3O95395 438 aa24.3■■□□□ 1.48
GTF2F1-204ENST00000594965 ADSSP30520 456 aa24.3■■□□□ 1.48
GTF2F1-204ENST00000594965 PPP2R3AQ06190 1150 aa24.3■■□□□ 1.48
GTF2F1-204ENST00000594965 L1TD1Q5T7N2 865 aaKnown RBP24.3■■□□□ 1.48
GTF2F1-204ENST00000594965 RSPO2Q6UXX9 243 aaPredicted RBP24.3■■□□□ 1.48
GTF2F1-204ENST00000594965 C15orf39Q6ZRI6 1047 aa24.3■■□□□ 1.48
GTF2F1-204ENST00000594965 IQUBQ8NA54 791 aa24.3■■□□□ 1.48
GTF2F1-204ENST00000594965 KIF12Q96FN5 646 aa24.3■■□□□ 1.48
GTF2F1-204ENST00000594965 TRIM9Q9C026 710 aa24.3■■□□□ 1.48
GTF2F1-204ENST00000594965 MTRRQ9UBK8 725 aa24.3■■□□□ 1.48
GTF2F1-204ENST00000594965 CCDC195A0A1B0GUA6 201 aa24.29■■□□□ 1.48
GTF2F1-204ENST00000594965 FAM86C2PA6NEL3 165 aa24.29■■□□□ 1.48
GTF2F1-204ENST00000594965 SPDYE4A6NLX3 237 aa24.29■■□□□ 1.48
GTF2F1-204ENST00000594965 C2CD4DB7Z1M9 353 aa24.29■■□□□ 1.48
GTF2F1-204ENST00000594965 POLR2DO15514 142 aaKnown RBP24.29■■□□□ 1.48
GTF2F1-204ENST00000594965 TRAPPC3O43617 180 aa24.29■■□□□ 1.48
GTF2F1-204ENST00000594965 GPR37L1O60883 481 aa24.29■■□□□ 1.48
GTF2F1-204ENST00000594965 LRPAP1P30533 357 aa24.29■■□□□ 1.48
GTF2F1-204ENST00000594965 ACOT2P49753 483 aa24.29■■□□□ 1.48
GTF2F1-204ENST00000594965 ADALQ6DHV7 355 aa24.29■■□□□ 1.48
GTF2F1-204ENST00000594965 SLFN12LQ6IEE8 588 aa24.29■■□□□ 1.48
GTF2F1-204ENST00000594965 PDXDC1Q6P996 788 aa24.29■■□□□ 1.48
GTF2F1-204ENST00000594965 KREMEN2Q8NCW0 462 aa24.29■■□□□ 1.48
GTF2F1-204ENST00000594965 ZNF707Q96C28 371 aaPredicted RBP24.29■■□□□ 1.48
GTF2F1-204ENST00000594965 LRFN3Q9BTN0 628 aa24.29■■□□□ 1.48
GTF2F1-204ENST00000594965 PLEKHA4Q9H4M7 779 aa24.29■■□□□ 1.48
GTF2F1-204ENST00000594965 DPP7Q9UHL4 492 aa24.29■■□□□ 1.48
GTF2F1-204ENST00000594965 FBXW11Q9UKB1 542 aa24.29■■□□□ 1.48
GTF2F1-204ENST00000594965 UBQLN1Q9UMX0 589 aaKnown RBP24.29■■□□□ 1.48
GTF2F1-204ENST00000594965 CYP3A5P20815 502 aa24.28■■□□□ 1.48
GTF2F1-204ENST00000594965 GUCY2FP51841 1108 aa24.28■■□□□ 1.48
GTF2F1-204ENST00000594965 CNNM4Q6P4Q7 775 aa24.28■■□□□ 1.48
GTF2F1-204ENST00000594965 CRELD2Q6UXH1 353 aaPredicted RBP24.28■■□□□ 1.48
GTF2F1-204ENST00000594965 CCDC65Q8IXS2 484 aa24.28■■□□□ 1.48
GTF2F1-204ENST00000594965 GLIS3Q8NEA6 775 aa24.28■■□□□ 1.48
GTF2F1-204ENST00000594965 HPS3Q969F9 1004 aa24.28■■□□□ 1.48
GTF2F1-204ENST00000594965 ACCSQ96QU6 501 aa24.28■■□□□ 1.48
GTF2F1-204ENST00000594965 RHOBTB2Q9BYZ6 727 aa24.28■■□□□ 1.48
GTF2F1-204ENST00000594965 LRRC27Q9C0I9 530 aa24.28■■□□□ 1.48
GTF2F1-204ENST00000594965 AGO2Q9UKV8 859 aaKnown RBP24.28■■□□□ 1.48
GTF2F1-204ENST00000594965 NR2E1Q9Y466 385 aa24.28■■□□□ 1.48
GTF2F1-204ENST00000594965 PCDHB13Q9Y5F0 798 aa24.28■■□□□ 1.48
GTF2F1-204ENST00000594965 BACE2Q9Y5Z0 518 aa24.28■■□□□ 1.48
GTF2F1-204ENST00000594965 SCN1AP35498 2009 aa24.28■■□□□ 1.48
GTF2F1-204ENST00000594965 PRPF6O94906 941 aaKnown RBP24.27■■□□□ 1.48
GTF2F1-204ENST00000594965 RAB33AQ14088 237 aa24.27■■□□□ 1.48
GTF2F1-204ENST00000594965 JADE1Q6IE81 842 aa24.27■■□□□ 1.48
GTF2F1-204ENST00000594965 ZSWIM2Q8NEG5 633 aa24.27■■□□□ 1.48
GTF2F1-204ENST00000594965 LEO1Q8WVC0 666 aaPredicted RBP24.27■■□□□ 1.48
GTF2F1-204ENST00000594965 SUSD3Q96L08 255 aa24.27■■□□□ 1.48
GTF2F1-204ENST00000594965 TSPAN18Q96SJ8 248 aa24.27■■□□□ 1.48
GTF2F1-204ENST00000594965 C7orf25Q9BPX7 421 aa24.27■■□□□ 1.48
GTF2F1-204ENST00000594965 TSHZ2Q9NRE2 1034 aa24.27■■□□□ 1.48
GTF2F1-204ENST00000594965 FAM13BQ9NYF5 915 aa24.27■■□□□ 1.48
GTF2F1-204ENST00000594965 DOCK8Q8NF50 2099 aa24.26■■□□□ 1.47
GTF2F1-204ENST00000594965 TSC2P49815 1807 aa24.26■■□□□ 1.47
GTF2F1-204ENST00000594965 SYN3O14994 580 aa24.26■■□□□ 1.47
GTF2F1-204ENST00000594965 TBC1D4O60343 1298 aa24.26■■□□□ 1.47
GTF2F1-204ENST00000594965 NFICP08651 508 aa24.26■■□□□ 1.47
GTF2F1-204ENST00000594965 CASP1P29466 404 aa24.26■■□□□ 1.47
GTF2F1-204ENST00000594965 OR1D2P34982 312 aa24.26■■□□□ 1.47
GTF2F1-204ENST00000594965 ALCAMQ13740 583 aa24.26■■□□□ 1.47
GTF2F1-204ENST00000594965 MRPL58Q14197 206 aaKnown RBP24.26■■□□□ 1.47
GTF2F1-204ENST00000594965 TMEM31Q5JXX7 168 aa24.26■■□□□ 1.47
GTF2F1-204ENST00000594965 VARS2Q5ST30 1063 aaKnown RBP24.26■■□□□ 1.47
GTF2F1-204ENST00000594965 SPATA1Q5VX52 437 aa24.26■■□□□ 1.47
GTF2F1-204ENST00000594965 ANKS3Q6ZW76 656 aa24.26■■□□□ 1.47
GTF2F1-204ENST00000594965 CD302Q8IX05 232 aa24.26■■□□□ 1.47
GTF2F1-204ENST00000594965 POMGNT1Q8WZA1 660 aa24.26■■□□□ 1.47
GTF2F1-204ENST00000594965 FAM212AQ96EL1 285 aa24.26■■□□□ 1.47
GTF2F1-204ENST00000594965 EXOC7Q9UPT5 735 aa24.26■■□□□ 1.47
GTF2F1-204ENST00000594965 NUB1Q9Y5A7 615 aa24.26■■□□□ 1.47
GTF2F1-204ENST00000594965 CDY1Q9Y6F8 540 aa24.26■■□□□ 1.47
GTF2F1-204ENST00000594965 NOTCH4Q99466 2003 aa24.25■■□□□ 1.47
GTF2F1-204ENST00000594965 PPEF2O14830 753 aa24.25■■□□□ 1.47
GTF2F1-204ENST00000594965 ZMYND10O75800 440 aa24.25■■□□□ 1.47
GTF2F1-204ENST00000594965 MCM4P33991 863 aa24.25■■□□□ 1.47
GTF2F1-204ENST00000594965 AMPD3Q01432 767 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms