RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 GCLMP48507 274 aa11.52□□□□□ -0.57
SMAD4-214ENST00000592186 FMO5P49326 533 aa11.52□□□□□ -0.57
SMAD4-214ENST00000592186 ALDH7A1P49419 539 aaKnown RBP11.52□□□□□ -0.57
SMAD4-214ENST00000592186 BIRC3Q13489 604 aa11.52□□□□□ -0.57
SMAD4-214ENST00000592186 TRPC3Q13507 836 aa11.52□□□□□ -0.57
SMAD4-214ENST00000592186 SGSM1Q2NKQ1 1148 aa11.52□□□□□ -0.57
SMAD4-214ENST00000592186 ZACNQ401N2 412 aa11.52□□□□□ -0.57
SMAD4-214ENST00000592186 C9orf50Q5SZB4 431 aa11.52□□□□□ -0.57
SMAD4-214ENST00000592186 C1orf220Q5T0J3 134 aa11.52□□□□□ -0.57
SMAD4-214ENST00000592186 DCLRE1AQ6PJP8 1040 aa11.52□□□□□ -0.57
SMAD4-214ENST00000592186 C15orf39Q6ZRI6 1047 aa11.52□□□□□ -0.57
SMAD4-214ENST00000592186 SV2AQ7L0J3 742 aa11.52□□□□□ -0.57
SMAD4-214ENST00000592186 TRAPPC11Q7Z392 1133 aa11.52□□□□□ -0.57
SMAD4-214ENST00000592186 CCDC150Q8NCX0 1101 aa11.52□□□□□ -0.57
SMAD4-214ENST00000592186 PLEKHO2Q8TD55 490 aa11.52□□□□□ -0.57
SMAD4-214ENST00000592186 ZNF516Q92618 1163 aa11.52□□□□□ -0.57
SMAD4-214ENST00000592186 TAF4BQ92750 862 aa11.52□□□□□ -0.57
SMAD4-214ENST00000592186 AAASQ9NRG9 546 aa11.52□□□□□ -0.57
SMAD4-214ENST00000592186 COQ4Q9Y3A0 265 aa11.52□□□□□ -0.57
SMAD4-214ENST00000592186 A0A1W2PPC1 479 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 LGALS16A8MUM7 142 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 PES1O00541 588 aaKnown RBP11.51□□□□□ -0.57
SMAD4-214ENST00000592186 TRIM49P0CI25 452 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 TRIM49CP0CI26 452 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 ATICP31939 592 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 MXI1P50539 228 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 AFF1P51825 1210 aaKnown RBP11.51□□□□□ -0.57
SMAD4-214ENST00000592186 COPB1P53618 953 aaKnown RBP11.51□□□□□ -0.57
SMAD4-214ENST00000592186 WNT7BP56706 349 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 UBASH3AP57075 661 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 FANCCQ00597 558 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 PPP3CAQ08209 521 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 DSC1Q08554 894 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 MYO1EQ12965 1108 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 NAB2Q15742 525 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 MIIPQ5JXC2 388 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 GLRA4Q5JXX5 417 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 FAM117BQ6P1L5 589 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 EFCAB13Q8IY85 973 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 TDHQ8IZJ6 230 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 FIBCD1Q8N539 461 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 LRRC52Q8N7C0 313 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 FBXL13Q8NEE6 735 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 OR5B17Q8NGF7 314 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 C18orf25Q96B23 403 aaPredicted RBP11.51□□□□□ -0.57
SMAD4-214ENST00000592186 FAXDC2Q96IV6 333 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 COLEC11Q9BWP8 271 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 IMPG2Q9BZV3 1241 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 MTMR12Q9C0I1 747 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 ZMYND15Q9H091 742 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 VPS16Q9H269 839 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 RC3H2Q9HBD1 1191 aaKnown RBP11.51□□□□□ -0.57
SMAD4-214ENST00000592186 RAB20Q9NX57 234 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 TAB2Q9NYJ8 693 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 STK39Q9UEW8 545 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 RWDD3Q9Y3V2 267 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 PCDHA11Q9Y5I1 949 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 TTC3P53804 2025 aa11.51□□□□□ -0.57
SMAD4-214ENST00000592186 TET1Q8NFU7 2136 aa11.5□□□□□ -0.57
SMAD4-214ENST00000592186 A0A1B0GTH6 734 aa11.5□□□□□ -0.57
SMAD4-214ENST00000592186 ANO9A1A5B4 782 aa11.5□□□□□ -0.57
SMAD4-214ENST00000592186 ARHGEF37A1IGU5 675 aa11.5□□□□□ -0.57
SMAD4-214ENST00000592186 GOLGA6L3A6NEY3 463 aa11.5□□□□□ -0.57
SMAD4-214ENST00000592186 PIRO00625 290 aa11.5□□□□□ -0.57
SMAD4-214ENST00000592186 TRAPPC3O43617 180 aa11.5□□□□□ -0.57
SMAD4-214ENST00000592186 ZC3H11AO75152 810 aaKnown RBP eCLIP11.5□□□□□ -0.57
SMAD4-214ENST00000592186 LAG3P18627 525 aa11.5□□□□□ -0.57
SMAD4-214ENST00000592186 MYL7Q01449 175 aa11.5□□□□□ -0.57
SMAD4-214ENST00000592186 UBXN1Q04323 297 aa11.5□□□□□ -0.57
SMAD4-214ENST00000592186 NCOA4Q13772 614 aa11.5□□□□□ -0.57
SMAD4-214ENST00000592186 NR1I3Q14994 352 aa11.5□□□□□ -0.57
SMAD4-214ENST00000592186 RAB30Q15771 203 aa11.5□□□□□ -0.57
SMAD4-214ENST00000592186 UPP1Q16831 310 aa11.5□□□□□ -0.57
SMAD4-214ENST00000592186 WDR44Q5JSH3 913 aa11.5□□□□□ -0.57
SMAD4-214ENST00000592186 TDRD10Q5VZ19 366 aaKnown RBP11.5□□□□□ -0.57
SMAD4-214ENST00000592186 C9orf57Q5W0N0 161 aa11.5□□□□□ -0.57
SMAD4-214ENST00000592186 SMYD5Q6GMV2 418 aa11.5□□□□□ -0.57
SMAD4-214ENST00000592186 SARM1Q6SZW1 724 aa11.5□□□□□ -0.57
SMAD4-214ENST00000592186 GBP6Q6ZN66 633 aa11.5□□□□□ -0.57
SMAD4-214ENST00000592186 APTXQ7Z2E3 356 aaKnown RBP11.5□□□□□ -0.57
SMAD4-214ENST00000592186 ZNF280BQ86YH2 543 aa11.5□□□□□ -0.57
SMAD4-214ENST00000592186 COLGALT2Q8IYK4 626 aa11.5□□□□□ -0.57
SMAD4-214ENST00000592186 C1orf127Q8N9H9 656 aa11.5□□□□□ -0.57
SMAD4-214ENST00000592186 SP7Q8TDD2 431 aaPredicted RBP11.5□□□□□ -0.57
SMAD4-214ENST00000592186 FAM81BQ96LP2 452 aa11.5□□□□□ -0.57
SMAD4-214ENST00000592186 ZNF560Q96MR9 790 aa11.5□□□□□ -0.57
SMAD4-214ENST00000592186 CXCL16Q9H2A7 254 aa11.5□□□□□ -0.57
SMAD4-214ENST00000592186 NRDE2Q9H7Z3 1164 aa11.5□□□□□ -0.57
SMAD4-214ENST00000592186 PLAGL2Q9UPG8 496 aa11.5□□□□□ -0.57
SMAD4-214ENST00000592186 AGAP1Q9UPQ3 857 aa11.5□□□□□ -0.57
SMAD4-214ENST00000592186 FAN1Q9Y2M0 1017 aa11.5□□□□□ -0.57
SMAD4-214ENST00000592186 PCDHB12Q9Y5F1 795 aa11.5□□□□□ -0.57
SMAD4-214ENST00000592186 PTPRJQ12913 1337 aa11.49□□□□□ -0.57
SMAD4-214ENST00000592186 DDHD2O94830 711 aa11.49□□□□□ -0.57
SMAD4-214ENST00000592186 STAU1O95793 577 aaKnown RBP11.49□□□□□ -0.57
SMAD4-214ENST00000592186 ITGB3P05106 788 aa11.49□□□□□ -0.57
SMAD4-214ENST00000592186 GALTP07902 379 aa11.49□□□□□ -0.57
SMAD4-214ENST00000592186 KRT19P08727 400 aa11.49□□□□□ -0.57
SMAD4-214ENST00000592186 FAM163BP0C2L3 166 aa11.49□□□□□ -0.57
SMAD4-214ENST00000592186 P4HA1P13674 534 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms