RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 PODXLO00592 558 aa20.72■□□□□ 0.91
DDX39A-214ENST00000590556 SLC16A3O15427 465 aaKnown RBP20.72■□□□□ 0.91
DDX39A-214ENST00000590556 ITGB1P05556 798 aa20.72■□□□□ 0.91
DDX39A-214ENST00000590556 KRT13P13646 458 aa20.72■□□□□ 0.91
DDX39A-214ENST00000590556 TNNI1P19237 187 aa20.72■□□□□ 0.91
DDX39A-214ENST00000590556 CLCNKBP51801 687 aa20.72■□□□□ 0.91
DDX39A-214ENST00000590556 PLCB3Q01970 1234 aa20.72■□□□□ 0.91
DDX39A-214ENST00000590556 UPP1Q16831 310 aa20.72■□□□□ 0.91
DDX39A-214ENST00000590556 LMBRD2Q68DH5 695 aaPredicted RBP20.72■□□□□ 0.91
DDX39A-214ENST00000590556 DCLRE1AQ6PJP8 1040 aa20.72■□□□□ 0.91
DDX39A-214ENST00000590556 INTS8Q75QN2 995 aaKnown RBP20.72■□□□□ 0.91
DDX39A-214ENST00000590556 TMEM173Q86WV6 379 aaPredicted RBP20.72■□□□□ 0.91
DDX39A-214ENST00000590556 WDR49Q8IV35 697 aa20.72■□□□□ 0.91
DDX39A-214ENST00000590556 BCL7CQ8WUZ0 217 aaPredicted RBP20.72■□□□□ 0.91
DDX39A-214ENST00000590556 CGRRF1Q99675 332 aa20.72■□□□□ 0.91
DDX39A-214ENST00000590556 PRDM12Q9H4Q4 367 aa20.72■□□□□ 0.91
DDX39A-214ENST00000590556 ALG13Q9NP73 1137 aaKnown RBP20.72■□□□□ 0.91
DDX39A-214ENST00000590556 INTS13Q9NVM9 706 aa20.72■□□□□ 0.91
DDX39A-214ENST00000590556 DPP3Q9NY33 737 aa20.72■□□□□ 0.91
DDX39A-214ENST00000590556 SYCE3A1L190 88 aa20.71■□□□□ 0.91
DDX39A-214ENST00000590556 RFXAPO00287 272 aa20.71■□□□□ 0.91
DDX39A-214ENST00000590556 TADA2AO75478 443 aa20.71■□□□□ 0.91
DDX39A-214ENST00000590556 FGFR1OPO95684 399 aaKnown RBP20.71■□□□□ 0.91
DDX39A-214ENST00000590556 TNNC2P02585 160 aa20.71■□□□□ 0.91
DDX39A-214ENST00000590556 TMEM191BP0C7N4 346 aa20.71■□□□□ 0.91
DDX39A-214ENST00000590556 LRPAP1P30533 357 aa20.71■□□□□ 0.91
DDX39A-214ENST00000590556 DUOXA2Q1HG44 320 aa20.71■□□□□ 0.91
DDX39A-214ENST00000590556 Q7L0L9 218 aa20.71■□□□□ 0.91
DDX39A-214ENST00000590556 FILIP1Q7Z7B0 1213 aa20.71■□□□□ 0.91
DDX39A-214ENST00000590556 USP37Q86T82 979 aa20.71■□□□□ 0.91
DDX39A-214ENST00000590556 TMEM130Q8N3G9 435 aa20.71■□□□□ 0.91
DDX39A-214ENST00000590556 SPPL3Q8TCT6 385 aa20.71■□□□□ 0.91
DDX39A-214ENST00000590556 PLEKHO2Q8TD55 490 aa20.71■□□□□ 0.91
DDX39A-214ENST00000590556 TMC2Q8TDI7 906 aa20.71■□□□□ 0.91
DDX39A-214ENST00000590556 PARD3BQ8TEW8 1205 aa20.71■□□□□ 0.91
DDX39A-214ENST00000590556 GDPD5Q8WTR4 605 aa20.71■□□□□ 0.91
DDX39A-214ENST00000590556 ANKRD36BP1Q96IX9 119 aa20.71■□□□□ 0.91
DDX39A-214ENST00000590556 MED15Q96RN5 788 aa20.71■□□□□ 0.91
DDX39A-214ENST00000590556 POP1Q99575 1024 aaKnown RBP20.71■□□□□ 0.91
DDX39A-214ENST00000590556 SRRTQ9BXP5 876 aaKnown RBP20.71■□□□□ 0.91
DDX39A-214ENST00000590556 MARCH5Q9NX47 278 aa20.71■□□□□ 0.91
DDX39A-214ENST00000590556 PUF60Q9UHX1 559 aaKnown RBP20.71■□□□□ 0.91
DDX39A-214ENST00000590556 F8W810 466 aa20.7■□□□□ 0.9
DDX39A-214ENST00000590556 GRM6O15303 877 aa20.7■□□□□ 0.9
DDX39A-214ENST00000590556 B3GAT3O94766 335 aa20.7■□□□□ 0.9
DDX39A-214ENST00000590556 KIF4AO95239 1232 aa20.7■□□□□ 0.9
DDX39A-214ENST00000590556 VAMP7P51809 220 aa20.7■□□□□ 0.9
DDX39A-214ENST00000590556 TPD52L1Q16890 204 aaPredicted RBP20.7■□□□□ 0.9
DDX39A-214ENST00000590556 DEFB123Q8N688 67 aa20.7■□□□□ 0.9
DDX39A-214ENST00000590556 OR5B17Q8NGF7 314 aa20.7■□□□□ 0.9
DDX39A-214ENST00000590556 FAM84AQ96KN4 292 aa20.7■□□□□ 0.9
DDX39A-214ENST00000590556 MTMR12Q9C0I1 747 aa20.7■□□□□ 0.9
DDX39A-214ENST00000590556 GZF1Q9H116 711 aaPredicted RBP20.7■□□□□ 0.9
DDX39A-214ENST00000590556 ADAM28Q9UKQ2 775 aa20.7■□□□□ 0.9
DDX39A-214ENST00000590556 PTPRJQ12913 1337 aa20.7■□□□□ 0.9
DDX39A-214ENST00000590556 CHD7Q9P2D1 2997 aa20.7■□□□□ 0.9
DDX39A-214ENST00000590556 PLXNA4Q9HCM2 1894 aa20.69■□□□□ 0.9
DDX39A-214ENST00000590556 LRRIQ3A6PVS8 624 aaPredicted RBP20.69■□□□□ 0.9
DDX39A-214ENST00000590556 TMEM189-UBE2V1I3L0A0 370 aa20.69■□□□□ 0.9
DDX39A-214ENST00000590556 CCDC192P0DO97 292 aa20.69■□□□□ 0.9
DDX39A-214ENST00000590556 DLG4P78352 724 aa20.69■□□□□ 0.9
DDX39A-214ENST00000590556 UBE3AQ05086 875 aa20.69■□□□□ 0.9
DDX39A-214ENST00000590556 ENPEPQ07075 957 aa20.69■□□□□ 0.9
DDX39A-214ENST00000590556 ZSCAN23Q3MJ62 389 aa20.69■□□□□ 0.9
DDX39A-214ENST00000590556 CCDC40Q4G0X9 1142 aa20.69■□□□□ 0.9
DDX39A-214ENST00000590556 C9orf57Q5W0N0 161 aa20.69■□□□□ 0.9
DDX39A-214ENST00000590556 C11orf57Q6ZUT1 292 aaPredicted RBP20.69■□□□□ 0.9
DDX39A-214ENST00000590556 DDX53Q86TM3 631 aaKnown RBP20.69■□□□□ 0.9
DDX39A-214ENST00000590556 HASPINQ8TF76 798 aa20.69■□□□□ 0.9
DDX39A-214ENST00000590556 POF1BQ8WVV4 589 aa20.69■□□□□ 0.9
DDX39A-214ENST00000590556 BORCS6Q96GS4 357 aa20.69■□□□□ 0.9
DDX39A-214ENST00000590556 DNAJC25Q9H1X3 360 aa20.69■□□□□ 0.9
DDX39A-214ENST00000590556 ARMCX3Q9UH62 379 aaPredicted RBP20.69■□□□□ 0.9
DDX39A-214ENST00000590556 LZTS1Q9Y250 596 aa20.69■□□□□ 0.9
DDX39A-214ENST00000590556 GNA14O95837 355 aa20.68■□□□□ 0.9
DDX39A-214ENST00000590556 AP3M2P53677 418 aa20.68■□□□□ 0.9
DDX39A-214ENST00000590556 CLDN10P78369 228 aa20.68■□□□□ 0.9
DDX39A-214ENST00000590556 BFSP1Q12934 665 aa20.68■□□□□ 0.9
DDX39A-214ENST00000590556 FRMD5Q7Z6J6 570 aa20.68■□□□□ 0.9
DDX39A-214ENST00000590556 C1orf127Q8N9H9 656 aa20.68■□□□□ 0.9
DDX39A-214ENST00000590556 ZNF516Q92618 1163 aa20.68■□□□□ 0.9
DDX39A-214ENST00000590556 METTL14Q9HCE5 456 aaKnown RBP20.68■□□□□ 0.9
DDX39A-214ENST00000590556 STK39Q9UEW8 545 aa20.68■□□□□ 0.9
DDX39A-214ENST00000590556 ITGA11Q9UKX5 1188 aa20.68■□□□□ 0.9
DDX39A-214ENST00000590556 R3HCC1Q9Y3T6 440 aaKnown RBP20.68■□□□□ 0.9
DDX39A-214ENST00000590556 NUB1Q9Y5A7 615 aa20.68■□□□□ 0.9
DDX39A-214ENST00000590556 COL4A4P53420 1690 aaPredicted RBP20.67■□□□□ 0.9
DDX39A-214ENST00000590556 ANO9A1A5B4 782 aa20.67■□□□□ 0.9
DDX39A-214ENST00000590556 PIRO00625 290 aa20.67■□□□□ 0.9
DDX39A-214ENST00000590556 PPEF2O14830 753 aa20.67■□□□□ 0.9
DDX39A-214ENST00000590556 IKBKBO14920 756 aa20.67■□□□□ 0.9
DDX39A-214ENST00000590556 LPXNO60711 386 aa20.67■□□□□ 0.9
DDX39A-214ENST00000590556 ITGB3P05106 788 aa20.67■□□□□ 0.9
DDX39A-214ENST00000590556 TRIM49P0CI25 452 aa20.67■□□□□ 0.9
DDX39A-214ENST00000590556 TRIM49CP0CI26 452 aa20.67■□□□□ 0.9
DDX39A-214ENST00000590556 IGFBP6P24592 240 aaPredicted RBP20.67■□□□□ 0.9
DDX39A-214ENST00000590556 DNAJB1P25685 340 aa20.67■□□□□ 0.9
DDX39A-214ENST00000590556 PTPROQ16827 1216 aa20.67■□□□□ 0.9
DDX39A-214ENST00000590556 ANO6Q4KMQ2 910 aa20.67■□□□□ 0.9
DDX39A-214ENST00000590556 FUT10Q6P4F1 479 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms