RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 CCDC127Q96BQ5 260 aa21.19■□□□□ 0.98
CIRBP-220ENST00000588917 ANKRD36BP1Q96IX9 119 aa21.19■□□□□ 0.98
CIRBP-220ENST00000588917 C11orf84Q9BUA3 381 aaPredicted RBP21.19■□□□□ 0.98
CIRBP-220ENST00000588917 CXCL16Q9H2A7 254 aa21.19■□□□□ 0.98
CIRBP-220ENST00000588917 DNAJB4Q9UDY4 337 aa21.19■□□□□ 0.98
CIRBP-220ENST00000588917 PUF60Q9UHX1 559 aaKnown RBP21.19■□□□□ 0.98
CIRBP-220ENST00000588917 R3HCC1Q9Y3T6 440 aaKnown RBP21.19■□□□□ 0.98
CIRBP-220ENST00000588917 FNDC1Q4ZHG4 1894 aaPredicted RBP21.18■□□□□ 0.98
CIRBP-220ENST00000588917 SYCE3A1L190 88 aa21.18■□□□□ 0.98
CIRBP-220ENST00000588917 STX10O60499 249 aa21.18■□□□□ 0.98
CIRBP-220ENST00000588917 CAVIN2O95810 425 aa21.18■□□□□ 0.98
CIRBP-220ENST00000588917 TNNC2P02585 160 aa21.18■□□□□ 0.98
CIRBP-220ENST00000588917 TFAMQ00059 246 aaKnown RBP21.18■□□□□ 0.98
CIRBP-220ENST00000588917 SPAG1Q07617 926 aa21.18■□□□□ 0.98
CIRBP-220ENST00000588917 ZSCAN23Q3MJ62 389 aa21.18■□□□□ 0.98
CIRBP-220ENST00000588917 FRMD5Q7Z6J6 570 aa21.18■□□□□ 0.98
CIRBP-220ENST00000588917 FBXO22Q8NEZ5 403 aa21.18■□□□□ 0.98
CIRBP-220ENST00000588917 ENOX1Q8TC92 643 aaKnown RBP21.18■□□□□ 0.98
CIRBP-220ENST00000588917 ATXN2LQ8WWM7 1075 aaKnown RBP21.18■□□□□ 0.98
CIRBP-220ENST00000588917 C17orf80Q9BSJ5 609 aa21.18■□□□□ 0.98
CIRBP-220ENST00000588917 PRDM6Q9NQX0 595 aa21.18■□□□□ 0.98
CIRBP-220ENST00000588917 INTS13Q9NVM9 706 aa21.18■□□□□ 0.98
CIRBP-220ENST00000588917 DPP3Q9NY33 737 aa21.18■□□□□ 0.98
CIRBP-220ENST00000588917 TADA2AO75478 443 aa21.17■□□□□ 0.98
CIRBP-220ENST00000588917 TMEM191BP0C7N4 346 aa21.17■□□□□ 0.98
CIRBP-220ENST00000588917 LINC00271P0C7V0 271 aa21.17■□□□□ 0.98
CIRBP-220ENST00000588917 DLATP10515 647 aaKnown RBP21.17■□□□□ 0.98
CIRBP-220ENST00000588917 LRPAP1P30533 357 aa21.17■□□□□ 0.98
CIRBP-220ENST00000588917 SLC11A1P49279 550 aa21.17■□□□□ 0.98
CIRBP-220ENST00000588917 VAMP7P51809 220 aa21.17■□□□□ 0.98
CIRBP-220ENST00000588917 MCCD1P59942 119 aaPredicted RBP21.17■□□□□ 0.98
CIRBP-220ENST00000588917 CLDN10P78369 228 aa21.17■□□□□ 0.98
CIRBP-220ENST00000588917 PLCB3Q01970 1234 aa21.17■□□□□ 0.98
CIRBP-220ENST00000588917 SLC39A11Q8N1S5 342 aa21.17■□□□□ 0.98
CIRBP-220ENST00000588917 C18orf25Q96B23 403 aaPredicted RBP21.17■□□□□ 0.98
CIRBP-220ENST00000588917 TMEM169Q96HH4 297 aa21.17■□□□□ 0.98
CIRBP-220ENST00000588917 CGRRF1Q99675 332 aa21.17■□□□□ 0.98
CIRBP-220ENST00000588917 ARMCX3Q9UH62 379 aaPredicted RBP21.17■□□□□ 0.98
CIRBP-220ENST00000588917 MYO9BQ13459 2157 aa21.17■□□□□ 0.98
CIRBP-220ENST00000588917 CASTOR2A6NHX0 329 aa21.16■□□□□ 0.98
CIRBP-220ENST00000588917 H3BNC9 293 aa21.16■□□□□ 0.98
CIRBP-220ENST00000588917 TRAPPC3O43617 180 aa21.16■□□□□ 0.98
CIRBP-220ENST00000588917 NFICP08651 508 aa21.16■□□□□ 0.98
CIRBP-220ENST00000588917 UBE3AQ05086 875 aa21.16■□□□□ 0.98
CIRBP-220ENST00000588917 BFSP1Q12934 665 aa21.16■□□□□ 0.98
CIRBP-220ENST00000588917 BMS1Q14692 1282 aaKnown RBP21.16■□□□□ 0.98
CIRBP-220ENST00000588917 CCDC85BQ15834 202 aaPredicted RBP21.16■□□□□ 0.98
CIRBP-220ENST00000588917 UPP1Q16831 310 aa21.16■□□□□ 0.98
CIRBP-220ENST00000588917 CCDC40Q4G0X9 1142 aa21.16■□□□□ 0.98
CIRBP-220ENST00000588917 FAM114A1Q8IWE2 563 aa21.16■□□□□ 0.98
CIRBP-220ENST00000588917 ARNTL2Q8WYA1 636 aa21.16■□□□□ 0.98
CIRBP-220ENST00000588917 EEF2KMTQ96G04 330 aa21.16■□□□□ 0.98
CIRBP-220ENST00000588917 IGSF21Q96ID5 467 aa21.16■□□□□ 0.98
CIRBP-220ENST00000588917 THEGQ9P2T0 379 aa21.16■□□□□ 0.98
CIRBP-220ENST00000588917 ITGA11Q9UKX5 1188 aa21.16■□□□□ 0.98
CIRBP-220ENST00000588917 LZTS1Q9Y250 596 aa21.16■□□□□ 0.98
CIRBP-220ENST00000588917 TMEM189-UBE2V1I3L0A0 370 aa21.15■□□□□ 0.98
CIRBP-220ENST00000588917 FGF18O76093 207 aa21.15■□□□□ 0.98
CIRBP-220ENST00000588917 ARHGEF15O94989 841 aa21.15■□□□□ 0.98
CIRBP-220ENST00000588917 GTF2H1P32780 548 aa21.15■□□□□ 0.98
CIRBP-220ENST00000588917 CLCNKBP51801 687 aa21.15■□□□□ 0.98
CIRBP-220ENST00000588917 SOX4Q06945 474 aaPredicted RBP21.15■□□□□ 0.98
CIRBP-220ENST00000588917 ELAVL2Q12926 359 aaKnown RBP21.15■□□□□ 0.98
CIRBP-220ENST00000588917 EFCAB13Q8IY85 973 aa21.15■□□□□ 0.98
CIRBP-220ENST00000588917 KLHL23Q8NBE8 558 aa21.15■□□□□ 0.98
CIRBP-220ENST00000588917 BORCS6Q96GS4 357 aa21.15■□□□□ 0.98
CIRBP-220ENST00000588917 BPIFA3Q9BQP9 254 aa21.15■□□□□ 0.98
CIRBP-220ENST00000588917 DNAJC25Q9H1X3 360 aa21.15■□□□□ 0.98
CIRBP-220ENST00000588917 THAP9Q9H5L6 903 aa21.15■□□□□ 0.98
CIRBP-220ENST00000588917 HCSTQ9UBK5 93 aa21.15■□□□□ 0.98
CIRBP-220ENST00000588917 MTUS1Q9ULD2 1270 aa21.15■□□□□ 0.98
CIRBP-220ENST00000588917 PRG3Q9Y2Y8 225 aaPredicted RBP21.15■□□□□ 0.98
CIRBP-220ENST00000588917 CHD7Q9P2D1 2997 aa21.14■□□□□ 0.97
CIRBP-220ENST00000588917 NT5C1B-RDH14C9J2C7 533 aa21.14■□□□□ 0.97
CIRBP-220ENST00000588917 PODXLO00592 558 aa21.14■□□□□ 0.97
CIRBP-220ENST00000588917 B3GAT3O94766 335 aa21.14■□□□□ 0.97
CIRBP-220ENST00000588917 PNPLA4P41247 253 aa21.14■□□□□ 0.97
CIRBP-220ENST00000588917 MARSP56192 900 aaKnown RBP21.14■□□□□ 0.97
CIRBP-220ENST00000588917 RBP5P82980 135 aa21.14■□□□□ 0.97
CIRBP-220ENST00000588917 GPM6BQ13491 265 aa21.14■□□□□ 0.97
CIRBP-220ENST00000588917 ANO6Q4KMQ2 910 aa21.14■□□□□ 0.97
CIRBP-220ENST00000588917 ASB2Q96Q27 587 aa21.14■□□□□ 0.97
CIRBP-220ENST00000588917 POP1Q99575 1024 aaKnown RBP21.14■□□□□ 0.97
CIRBP-220ENST00000588917 ANP32EQ9BTT0 268 aa21.14■□□□□ 0.97
CIRBP-220ENST00000588917 FUCA2Q9BTY2 467 aa21.14■□□□□ 0.97
CIRBP-220ENST00000588917 LMAN2LQ9H0V9 348 aa21.14■□□□□ 0.97
CIRBP-220ENST00000588917 TUBGCP4Q9UGJ1 667 aa21.14■□□□□ 0.97
CIRBP-220ENST00000588917 ADAM28Q9UKQ2 775 aa21.14■□□□□ 0.97
CIRBP-220ENST00000588917 ANO9A1A5B4 782 aa21.13■□□□□ 0.97
CIRBP-220ENST00000588917 LRRIQ3A6PVS8 624 aaPredicted RBP21.13■□□□□ 0.97
CIRBP-220ENST00000588917 SMTNL1A8MU46 457 aa21.13■□□□□ 0.97
CIRBP-220ENST00000588917 TNFRSF10AO00220 468 aa21.13■□□□□ 0.97
CIRBP-220ENST00000588917 PIRO00625 290 aa21.13■□□□□ 0.97
CIRBP-220ENST00000588917 B4GALT3O60512 393 aa21.13■□□□□ 0.97
CIRBP-220ENST00000588917 PRKCSHP14314 528 aaPredicted RBP21.13■□□□□ 0.97
CIRBP-220ENST00000588917 WNT7BP56706 349 aa21.13■□□□□ 0.97
CIRBP-220ENST00000588917 MRPS5P82675 430 aaKnown RBP21.13■□□□□ 0.97
CIRBP-220ENST00000588917 C9orf57Q5W0N0 161 aa21.13■□□□□ 0.97
CIRBP-220ENST00000588917 TRAPPC11Q7Z392 1133 aa21.13■□□□□ 0.97
CIRBP-220ENST00000588917 DDX53Q86TM3 631 aaKnown RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms