RNA–Protein interactions for RNA: ENST00000586588.5

DNMT1-207, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 3,094 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-207ENST00000586588 PPP2R5CQ13362 524 aa13.91□□□□□ -0.18
DNMT1-207ENST00000586588 TBC1D9BQ66K14 1250 aa13.91□□□□□ -0.18
DNMT1-207ENST00000586588 RINLQ6ZS11 566 aa13.91□□□□□ -0.18
DNMT1-207ENST00000586588 NET1Q7Z628 596 aaPredicted RBP13.91□□□□□ -0.18
DNMT1-207ENST00000586588 GPBP1Q86WP2 473 aa13.91□□□□□ -0.18
DNMT1-207ENST00000586588 ALDH16A1Q8IZ83 802 aa13.91□□□□□ -0.18
DNMT1-207ENST00000586588 BBOF1Q8ND07 529 aa13.91□□□□□ -0.18
DNMT1-207ENST00000586588 ZNF384Q8TF68 577 aa13.91□□□□□ -0.18
DNMT1-207ENST00000586588 GRK7Q8WTQ7 553 aa13.91□□□□□ -0.18
DNMT1-207ENST00000586588 NDE1Q9NXR1 346 aa13.91□□□□□ -0.18
DNMT1-207ENST00000586588 EDIL3O43854 480 aa13.91□□□□□ -0.18
DNMT1-207ENST00000586588 CYP2D6P10635 497 aa13.91□□□□□ -0.18
DNMT1-207ENST00000586588 SERPINB3P29508 390 aa13.91□□□□□ -0.18
DNMT1-207ENST00000586588 CETN2P41208 172 aa13.91□□□□□ -0.18
DNMT1-207ENST00000586588 GPC5P78333 572 aa13.91□□□□□ -0.18
DNMT1-207ENST00000586588 KIF22Q14807 665 aa13.91□□□□□ -0.18
DNMT1-207ENST00000586588 ADGRG6Q86SQ4 1221 aa13.91□□□□□ -0.18
DNMT1-207ENST00000586588 LARGE2Q8N3Y3 721 aa13.91□□□□□ -0.18
DNMT1-207ENST00000586588 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.91□□□□□ -0.18
DNMT1-207ENST00000586588 LINC00116Q8NCU8 138 aa13.91□□□□□ -0.18
DNMT1-207ENST00000586588 HAUS1Q96CS2 278 aa13.91□□□□□ -0.18
DNMT1-207ENST00000586588 AGBL1Q96MI9 1066 aa13.91□□□□□ -0.18
DNMT1-207ENST00000586588 OSBPL8Q9BZF1 889 aa13.91□□□□□ -0.18
DNMT1-207ENST00000586588 FOXP3Q9BZS1 431 aa13.91□□□□□ -0.18
DNMT1-207ENST00000586588 GPR88Q9GZN0 384 aa13.91□□□□□ -0.18
DNMT1-207ENST00000586588 PCDH18Q9HCL0 1135 aa13.91□□□□□ -0.18
DNMT1-207ENST00000586588 SSU72Q9NP77 194 aaKnown RBP13.91□□□□□ -0.18
DNMT1-207ENST00000586588 NHSQ6T4R5 1651 aa13.91□□□□□ -0.18
DNMT1-207ENST00000586588 hCG_1984214I3L0E3 225 aa13.9□□□□□ -0.18
DNMT1-207ENST00000586588 ATF2P15336 505 aa13.9□□□□□ -0.18
DNMT1-207ENST00000586588 RPA3P35244 121 aaPredicted RBP13.9□□□□□ -0.18
DNMT1-207ENST00000586588 PGM1P36871 562 aa13.9□□□□□ -0.18
DNMT1-207ENST00000586588 RPL26P61254 145 aaKnown RBP13.9□□□□□ -0.18
DNMT1-207ENST00000586588 TRMT5Q32P41 509 aaKnown RBP13.9□□□□□ -0.18
DNMT1-207ENST00000586588 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.9□□□□□ -0.18
DNMT1-207ENST00000586588 RBM26Q5T8P6 1007 aaKnown RBP13.9□□□□□ -0.18
DNMT1-207ENST00000586588 CCDC62Q6P9F0 684 aa13.9□□□□□ -0.18
DNMT1-207ENST00000586588 ZNF554Q86TJ5 538 aa13.9□□□□□ -0.18
DNMT1-207ENST00000586588 ZNF713Q8N859 430 aaPredicted RBP13.9□□□□□ -0.18
DNMT1-207ENST00000586588 SYT2Q8N9I0 419 aaPredicted RBP13.9□□□□□ -0.18
DNMT1-207ENST00000586588 CLMNQ96JQ2 1002 aa13.9□□□□□ -0.18
DNMT1-207ENST00000586588 PLVAPQ9BX97 442 aa13.9□□□□□ -0.18
DNMT1-207ENST00000586588 GPAMQ9HCL2 828 aa13.9□□□□□ -0.18
DNMT1-207ENST00000586588 HEY2Q9UBP5 337 aa13.9□□□□□ -0.18
DNMT1-207ENST00000586588 KIAA1551Q9HCM1 1747 aa13.9□□□□□ -0.18
DNMT1-207ENST00000586588 TYROBPO43914 113 aa13.9□□□□□ -0.18
DNMT1-207ENST00000586588 ESRRAP11474 423 aaPredicted RBP13.9□□□□□ -0.18
DNMT1-207ENST00000586588 AMPD1P23109 780 aa13.9□□□□□ -0.18
DNMT1-207ENST00000586588 RASA2Q15283 850 aa13.9□□□□□ -0.18
DNMT1-207ENST00000586588 SLC1A5Q15758 541 aa13.9□□□□□ -0.18
DNMT1-207ENST00000586588 SGO2Q562F6 1265 aa13.9□□□□□ -0.18
DNMT1-207ENST00000586588 CFAP157Q5JU67 520 aa13.9□□□□□ -0.18
DNMT1-207ENST00000586588 SKA1Q96BD8 255 aa13.9□□□□□ -0.18
DNMT1-207ENST00000586588 CFAP57Q96MR6 1250 aa13.9□□□□□ -0.18
DNMT1-207ENST00000586588 PHACTR1Q9C0D0 580 aa13.9□□□□□ -0.18
DNMT1-207ENST00000586588 KIAA1586Q9HCI6 787 aa13.9□□□□□ -0.18
DNMT1-207ENST00000586588 MTO1Q9Y2Z2 717 aaKnown RBP13.9□□□□□ -0.18
DNMT1-207ENST00000586588 ZNF831Q5JPB2 1677 aa13.9□□□□□ -0.18
DNMT1-207ENST00000586588 E9PMD0 336 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 AP1G1O43747 822 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 STRNO43815 780 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 NR3C1P04150 777 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 CA4P22748 312 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 CBX3Q13185 183 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 C6orf163Q5TEZ5 329 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 PALB2Q86YC2 1186 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 GJD4Q96KN9 370 aaPredicted RBP13.89□□□□□ -0.19
DNMT1-207ENST00000586588 AGPAT1Q99943 283 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 PPCSQ9HAB8 311 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 TIMMDC1Q9NPL8 285 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 DNAJC17Q9NVM6 304 aaKnown RBP13.89□□□□□ -0.19
DNMT1-207ENST00000586588 TMEM260Q9NX78 707 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 SH3GLB1Q9Y371 365 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 NPHP3-ACAD11A0A0J9YXS1 232 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 OPHN1O60890 802 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 GCAP28676 217 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 HOXD13P35453 343 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 CASP5P51878 434 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 MED21Q13503 144 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 MESDQ14696 234 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 BMT2Q1RMZ1 405 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 B3GNT6Q6ZMB0 384 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 SMYD1Q8NB12 490 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 TRIM55Q9BYV6 548 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 PAIP2BQ9ULR5 123 aaKnown RBP13.89□□□□□ -0.19
DNMT1-207ENST00000586588 EXOC1LA0A1B0GW35 172 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 TMEM110-MUSTN1A8MSY1 372 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 CAMTA2O94983 1202 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 FTLP02792 175 aaPredicted RBP13.89□□□□□ -0.19
DNMT1-207ENST00000586588 IDO1P14902 403 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 GRIA2P42262 883 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 ACTR3P61158 418 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 PHEXP78562 749 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 XIAPP98170 497 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 TMEM62Q0P6H9 643 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 ASPHQ12797 758 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 MPP3Q13368 585 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 CYLC2Q14093 348 aaPredicted RBP13.89□□□□□ -0.19
DNMT1-207ENST00000586588 TMCO4Q5TGY1 634 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 TMPRSS6Q8IU80 811 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms