RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 EXOC7Q9UPT5 735 aa18.11■□□□□ 0.49
SREBF1-219ENST00000580540 PCDHB13Q9Y5F0 798 aa18.11■□□□□ 0.49
SREBF1-219ENST00000580540 CCDC195A0A1B0GUA6 201 aa18.1■□□□□ 0.49
SREBF1-219ENST00000580540 TTC26A0AVF1 554 aa18.1■□□□□ 0.49
SREBF1-219ENST00000580540 POLR2DO15514 142 aaKnown RBP18.1■□□□□ 0.49
SREBF1-219ENST00000580540 RFPL2O75678 378 aa18.1■□□□□ 0.49
SREBF1-219ENST00000580540 FGFR3P22607 806 aa18.1■□□□□ 0.49
SREBF1-219ENST00000580540 ACOT2P49753 483 aa18.1■□□□□ 0.49
SREBF1-219ENST00000580540 AMPD3Q01432 767 aa18.1■□□□□ 0.49
SREBF1-219ENST00000580540 KCNA1Q09470 495 aa18.1■□□□□ 0.49
SREBF1-219ENST00000580540 BECN1Q14457 450 aa18.1■□□□□ 0.49
SREBF1-219ENST00000580540 E2F4Q16254 413 aa18.1■□□□□ 0.49
SREBF1-219ENST00000580540 PDXDC1Q6P996 788 aa18.1■□□□□ 0.49
SREBF1-219ENST00000580540 GPR149Q86SP6 731 aa18.1■□□□□ 0.49
SREBF1-219ENST00000580540 KREMEN2Q8NCW0 462 aa18.1■□□□□ 0.49
SREBF1-219ENST00000580540 POMGNT1Q8WZA1 660 aa18.1■□□□□ 0.49
SREBF1-219ENST00000580540 HVCN1Q96D96 273 aa18.1■□□□□ 0.49
SREBF1-219ENST00000580540 CHAMP1Q96JM3 812 aa18.1■□□□□ 0.49
SREBF1-219ENST00000580540 CLSTN3Q9BQT9 956 aa18.1■□□□□ 0.49
SREBF1-219ENST00000580540 TNMDQ9H2S6 317 aa18.1■□□□□ 0.49
SREBF1-219ENST00000580540 CUEDC2Q9H467 287 aa18.1■□□□□ 0.49
SREBF1-219ENST00000580540 RCOR1Q9UKL0 485 aa18.1■□□□□ 0.49
SREBF1-219ENST00000580540 AGO2Q9UKV8 859 aaKnown RBP18.1■□□□□ 0.49
SREBF1-219ENST00000580540 ZDHHC9Q9Y397 364 aa18.1■□□□□ 0.49
SREBF1-219ENST00000580540 NR2E1Q9Y466 385 aa18.1■□□□□ 0.49
SREBF1-219ENST00000580540 ADAM12O43184 909 aa18.09■□□□□ 0.49
SREBF1-219ENST00000580540 MCM4P33991 863 aa18.09■□□□□ 0.49
SREBF1-219ENST00000580540 OR1D2P34982 312 aa18.09■□□□□ 0.49
SREBF1-219ENST00000580540 GUCY2FP51841 1108 aa18.09■□□□□ 0.49
SREBF1-219ENST00000580540 ASIC1P78348 528 aa18.09■□□□□ 0.49
SREBF1-219ENST00000580540 TMEM31Q5JXX7 168 aa18.09■□□□□ 0.49
SREBF1-219ENST00000580540 L1TD1Q5T7N2 865 aaKnown RBP18.09■□□□□ 0.49
SREBF1-219ENST00000580540 PLEKHA4Q9H4M7 779 aa18.09■□□□□ 0.49
SREBF1-219ENST00000580540 PIDD1Q9HB75 910 aa18.09■□□□□ 0.49
SREBF1-219ENST00000580540 UBQLN1Q9UMX0 589 aaKnown RBP18.09■□□□□ 0.49
SREBF1-219ENST00000580540 PLXNA3P51805 1871 aa18.09■□□□□ 0.49
SREBF1-219ENST00000580540 XPOTO43592 962 aaKnown RBP18.08■□□□□ 0.48
SREBF1-219ENST00000580540 FAM189A1O60320 539 aa18.08■□□□□ 0.48
SREBF1-219ENST00000580540 PPP1R37O75864 691 aa18.08■□□□□ 0.48
SREBF1-219ENST00000580540 PRPF6O94906 941 aaKnown RBP18.08■□□□□ 0.48
SREBF1-219ENST00000580540 CASP5P51878 434 aa18.08■□□□□ 0.48
SREBF1-219ENST00000580540 POSTNQ15063 836 aa18.08■□□□□ 0.48
SREBF1-219ENST00000580540 RESP18Q5W5W9 173 aa18.08■□□□□ 0.48
SREBF1-219ENST00000580540 LILRA6Q6PI73 481 aa18.08■□□□□ 0.48
SREBF1-219ENST00000580540 NOC3LQ8WTT2 800 aaKnown RBP18.08■□□□□ 0.48
SREBF1-219ENST00000580540 SMG7Q92540 1137 aaKnown RBP18.08■□□□□ 0.48
SREBF1-219ENST00000580540 HPS3Q969F9 1004 aa18.08■□□□□ 0.48
SREBF1-219ENST00000580540 SPATA32Q96LK8 384 aa18.08■□□□□ 0.48
SREBF1-219ENST00000580540 STRA6Q9BX79 667 aa18.08■□□□□ 0.48
SREBF1-219ENST00000580540 FGFBP2Q9BYJ0 223 aa18.08■□□□□ 0.48
SREBF1-219ENST00000580540 TRIM9Q9C026 710 aa18.08■□□□□ 0.48
SREBF1-219ENST00000580540 OLFML3Q9NRN5 406 aa18.08■□□□□ 0.48
SREBF1-219ENST00000580540 KBTBD4Q9NVX7 518 aa18.08■□□□□ 0.48
SREBF1-219ENST00000580540 CPSF3Q9UKF6 684 aaKnown RBP18.08■□□□□ 0.48
SREBF1-219ENST00000580540 CDY1Q9Y6F8 540 aa18.08■□□□□ 0.48
SREBF1-219ENST00000580540 FRMD3A2A2Y4 597 aa18.07■□□□□ 0.48
SREBF1-219ENST00000580540 C2CD4DB7Z1M9 353 aa18.07■□□□□ 0.48
SREBF1-219ENST00000580540 AFMP43652 599 aa18.07■□□□□ 0.48
SREBF1-219ENST00000580540 ARPP19P56211 112 aa18.07■□□□□ 0.48
SREBF1-219ENST00000580540 KRT85P78386 507 aa18.07■□□□□ 0.48
SREBF1-219ENST00000580540 LIN9Q5TKA1 542 aa18.07■□□□□ 0.48
SREBF1-219ENST00000580540 JADE1Q6IE81 842 aa18.07■□□□□ 0.48
SREBF1-219ENST00000580540 CCDC149Q6ZUS6 474 aa18.07■□□□□ 0.48
SREBF1-219ENST00000580540 ANKS3Q6ZW76 656 aa18.07■□□□□ 0.48
SREBF1-219ENST00000580540 TDRD5Q8NAT2 981 aaKnown RBP18.07■□□□□ 0.48
SREBF1-219ENST00000580540 HDAC7Q8WUI4 952 aa18.07■□□□□ 0.48
SREBF1-219ENST00000580540 LRFN3Q9BTN0 628 aa18.07■□□□□ 0.48
SREBF1-219ENST00000580540 BLZF1Q9H2G9 400 aa18.07■□□□□ 0.48
SREBF1-219ENST00000580540 MTRRQ9UBK8 725 aa18.07■□□□□ 0.48
SREBF1-219ENST00000580540 KCNH3Q9ULD8 1083 aa18.07■□□□□ 0.48
SREBF1-219ENST00000580540 VWA8A3KMH1 1905 aa18.06■□□□□ 0.48
SREBF1-219ENST00000580540 NFICP08651 508 aa18.06■□□□□ 0.48
SREBF1-219ENST00000580540 CASP1P29466 404 aa18.06■□□□□ 0.48
SREBF1-219ENST00000580540 ADSSP30520 456 aa18.06■□□□□ 0.48
SREBF1-219ENST00000580540 ALCAMQ13740 583 aa18.06■□□□□ 0.48
SREBF1-219ENST00000580540 TMEM132DQ14C87 1099 aa18.06■□□□□ 0.48
SREBF1-219ENST00000580540 ZBTB6Q15916 424 aa18.06■□□□□ 0.48
SREBF1-219ENST00000580540 VARS2Q5ST30 1063 aaKnown RBP18.06■□□□□ 0.48
SREBF1-219ENST00000580540 RSPO2Q6UXX9 243 aaPredicted RBP18.06■□□□□ 0.48
SREBF1-219ENST00000580540 C15orf39Q6ZRI6 1047 aa18.06■□□□□ 0.48
SREBF1-219ENST00000580540 STXBP4Q6ZWJ1 553 aa18.06■□□□□ 0.48
SREBF1-219ENST00000580540 CD302Q8IX05 232 aa18.06■□□□□ 0.48
SREBF1-219ENST00000580540 CEP57L1Q8IYX8 460 aa18.06■□□□□ 0.48
SREBF1-219ENST00000580540 BEST2Q8NFU1 509 aa18.06■□□□□ 0.48
SREBF1-219ENST00000580540 CMASQ8NFW8 434 aaPredicted RBP18.06■□□□□ 0.48
SREBF1-219ENST00000580540 LEO1Q8WVC0 666 aaPredicted RBP18.06■□□□□ 0.48
SREBF1-219ENST00000580540 ATP6V1DQ9Y5K8 247 aa18.06■□□□□ 0.48
SREBF1-219ENST00000580540 STYXL1Q9Y6J8 313 aa18.06■□□□□ 0.48
SREBF1-219ENST00000580540 SYN3O14994 580 aa18.05■□□□□ 0.48
SREBF1-219ENST00000580540 ZMYND10O75800 440 aa18.05■□□□□ 0.48
SREBF1-219ENST00000580540 C1RP00736 705 aa18.05■□□□□ 0.48
SREBF1-219ENST00000580540 CYP3A5P20815 502 aa18.05■□□□□ 0.48
SREBF1-219ENST00000580540 LRPAP1P30533 357 aa18.05■□□□□ 0.48
SREBF1-219ENST00000580540 RAB33AQ14088 237 aa18.05■□□□□ 0.48
SREBF1-219ENST00000580540 PPM1LQ5SGD2 360 aa18.05■□□□□ 0.48
SREBF1-219ENST00000580540 GLIS3Q8NEA6 775 aa18.05■□□□□ 0.48
SREBF1-219ENST00000580540 ACSF2Q96CM8 615 aaPredicted RBP18.05■□□□□ 0.48
SREBF1-219ENST00000580540 SAAL1Q96ER3 474 aa18.05■□□□□ 0.48
SREBF1-219ENST00000580540 SUSD3Q96L08 255 aa18.05■□□□□ 0.48
SREBF1-219ENST00000580540 C7orf25Q9BPX7 421 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms