RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 CCDC85BQ15834 202 aaPredicted RBP12.95□□□□□ -0.34
RABGGTA-218ENST00000560777 ANKRD40Q6AI12 368 aa12.95□□□□□ -0.34
RABGGTA-218ENST00000560777 PDE12Q6L8Q7 609 aaKnown RBP12.95□□□□□ -0.34
RABGGTA-218ENST00000560777 FUT10Q6P4F1 479 aa12.95□□□□□ -0.34
RABGGTA-218ENST00000560777 TMC7Q7Z402 723 aa12.95□□□□□ -0.34
RABGGTA-218ENST00000560777 NT5DC4Q86YG4 428 aa12.95□□□□□ -0.34
RABGGTA-218ENST00000560777 MRPL43Q8N983 215 aaKnown RBP12.95□□□□□ -0.34
RABGGTA-218ENST00000560777 TRIML1Q8N9V2 468 aa12.95□□□□□ -0.34
RABGGTA-218ENST00000560777 DHTKD1Q96HY7 919 aaPredicted RBP12.95□□□□□ -0.34
RABGGTA-218ENST00000560777 TCF25Q9BQ70 676 aa12.95□□□□□ -0.34
RABGGTA-218ENST00000560777 ZBP1Q9H171 429 aa12.95□□□□□ -0.34
RABGGTA-218ENST00000560777 NGRNQ9NPE2 291 aaKnown RBP12.95□□□□□ -0.34
RABGGTA-218ENST00000560777 CHST7Q9NS84 486 aa12.95□□□□□ -0.34
RABGGTA-218ENST00000560777 ANK1P16157 1881 aa12.95□□□□□ -0.34
RABGGTA-218ENST00000560777 PDCD11Q14690 1871 aaKnown RBP12.95□□□□□ -0.34
RABGGTA-218ENST00000560777 REV3LO60673 3130 aa12.94□□□□□ -0.34
RABGGTA-218ENST00000560777 HIDE1A8MVS5 230 aa12.94□□□□□ -0.34
RABGGTA-218ENST00000560777 XPOTO43592 962 aaKnown RBP12.94□□□□□ -0.34
RABGGTA-218ENST00000560777 LILRB3O75022 631 aa12.94□□□□□ -0.34
RABGGTA-218ENST00000560777 CXCL14O95715 111 aa12.94□□□□□ -0.34
RABGGTA-218ENST00000560777 MBD3O95983 291 aa12.94□□□□□ -0.34
RABGGTA-218ENST00000560777 SOD2P04179 222 aa12.94□□□□□ -0.34
RABGGTA-218ENST00000560777 CTSAP10619 480 aa12.94□□□□□ -0.34
RABGGTA-218ENST00000560777 NR2F2P24468 414 aa12.94□□□□□ -0.34
RABGGTA-218ENST00000560777 CYP24A1Q07973 514 aa12.94□□□□□ -0.34
RABGGTA-218ENST00000560777 ADAM9Q13443 819 aa12.94□□□□□ -0.34
RABGGTA-218ENST00000560777 PSMD6Q15008 389 aa12.94□□□□□ -0.34
RABGGTA-218ENST00000560777 SURF1Q15526 300 aa12.94□□□□□ -0.34
RABGGTA-218ENST00000560777 EDRF1Q3B7T1 1238 aa12.94□□□□□ -0.34
RABGGTA-218ENST00000560777 TCEAL5Q5H9L2 206 aa12.94□□□□□ -0.34
RABGGTA-218ENST00000560777 KIAA0319Q5VV43 1072 aa12.94□□□□□ -0.34
RABGGTA-218ENST00000560777 SCARA3Q6AZY7 606 aa12.94□□□□□ -0.34
RABGGTA-218ENST00000560777 ADGRD2Q7Z7M1 963 aa12.94□□□□□ -0.34
RABGGTA-218ENST00000560777 MICALL1Q8N3F8 863 aa12.94□□□□□ -0.34
RABGGTA-218ENST00000560777 BEST2Q8NFU1 509 aa12.94□□□□□ -0.34
RABGGTA-218ENST00000560777 MAFAQ8NHW3 353 aaPredicted RBP12.94□□□□□ -0.34
RABGGTA-218ENST00000560777 PPM1EQ8WY54 764 aa12.94□□□□□ -0.34
RABGGTA-218ENST00000560777 FAM84AQ96KN4 292 aa12.94□□□□□ -0.34
RABGGTA-218ENST00000560777 POP1Q99575 1024 aaKnown RBP12.94□□□□□ -0.34
RABGGTA-218ENST00000560777 GZF1Q9H116 711 aaPredicted RBP12.94□□□□□ -0.34
RABGGTA-218ENST00000560777 NSUN3Q9H649 340 aaKnown RBP12.94□□□□□ -0.34
RABGGTA-218ENST00000560777 DPP3Q9NY33 737 aa12.94□□□□□ -0.34
RABGGTA-218ENST00000560777 STK39Q9UEW8 545 aa12.94□□□□□ -0.34
RABGGTA-218ENST00000560777 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.94□□□□□ -0.34
RABGGTA-218ENST00000560777 EYSQ5T1H1 3165 aa12.94□□□□□ -0.34
RABGGTA-218ENST00000560777 COL6A3P12111 3177 aa12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 PTPRJQ12913 1337 aa12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 ANO9A1A5B4 782 aa12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 TRIM49BA6NDI0 452 aa12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 C2orf71A6NGG8 1288 aa12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 PIRO00625 290 aa12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 PSMA7O14818 248 aa12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 PPEF2O14830 753 aa12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 AKAP3O75969 853 aa12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 CCNE1P24864 410 aa12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 RPL13P26373 211 aaKnown RBP12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 PPP1R2P41236 205 aa12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 BRCC3P46736 316 aa12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 TFAMQ00059 246 aaKnown RBP12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 STIM1Q13586 685 aa12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 SMC1AQ14683 1233 aaKnown RBP12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 USP41Q3LFD5 358 aa12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 TIGD5Q53EQ6 642 aa12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 PLPP4Q5VZY2 271 aa12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 C9orf57Q5W0N0 161 aa12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 CEP135Q66GS9 1140 aa12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 LMBRD2Q68DH5 695 aaPredicted RBP12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 OR5B17Q8NGF7 314 aa12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 CXorf38Q8TB03 319 aa12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 PLEKHO2Q8TD55 490 aa12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 CACTINQ8WUQ7 758 aaKnown RBP12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 AUTS2Q8WXX7 1259 aa12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 CCDC127Q96BQ5 260 aa12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 EEF2KMTQ96G04 330 aa12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 B3GALT6Q96L58 329 aa12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 HERC2P3Q9BVR0 1158 aa12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 ENTPD7Q9NQZ7 604 aa12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 INTS13Q9NVM9 706 aa12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 FRMD4BQ9Y2L6 1034 aa12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 IRAK3Q9Y616 596 aa12.93□□□□□ -0.34
RABGGTA-218ENST00000560777 SF3B1O75533 1304 aaKnown RBP eCLIP12.92□□□□□ -0.34
RABGGTA-218ENST00000560777 ATG2AQ2TAZ0 1938 aa12.92□□□□□ -0.34
RABGGTA-218ENST00000560777 I3L4J1 428 aa12.92□□□□□ -0.34
RABGGTA-218ENST00000560777 PER2O15055 1255 aa12.92□□□□□ -0.34
RABGGTA-218ENST00000560777 MAPK13O15264 365 aa12.92□□□□□ -0.34
RABGGTA-218ENST00000560777 DLATP10515 647 aaKnown RBP12.92□□□□□ -0.34
RABGGTA-218ENST00000560777 GTF2F1P35269 517 aaKnown RBP eCLIP12.92□□□□□ -0.34
RABGGTA-218ENST00000560777 CLDN10P78369 228 aa12.92□□□□□ -0.34
RABGGTA-218ENST00000560777 FKBP3Q00688 224 aaKnown RBP12.92□□□□□ -0.34
RABGGTA-218ENST00000560777 DSG1Q02413 1049 aa12.92□□□□□ -0.34
RABGGTA-218ENST00000560777 LRRC63Q05C16 580 aa12.92□□□□□ -0.34
RABGGTA-218ENST00000560777 HYAL1Q12794 435 aa12.92□□□□□ -0.34
RABGGTA-218ENST00000560777 BMS1Q14692 1282 aaKnown RBP12.92□□□□□ -0.34
RABGGTA-218ENST00000560777 PTPN14Q15678 1187 aa12.92□□□□□ -0.34
RABGGTA-218ENST00000560777 DUOXA2Q1HG44 320 aa12.92□□□□□ -0.34
RABGGTA-218ENST00000560777 FAM171A1Q5VUB5 890 aa12.92□□□□□ -0.34
RABGGTA-218ENST00000560777 KLHL10Q6JEL2 608 aa12.92□□□□□ -0.34
RABGGTA-218ENST00000560777 RBM43Q6ZSC3 357 aaKnown RBP12.92□□□□□ -0.34
RABGGTA-218ENST00000560777 RBM23Q86U06 439 aaKnown RBP12.92□□□□□ -0.34
RABGGTA-218ENST00000560777 WDR49Q8IV35 697 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms