RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 DNAJB2P25686 324 aa18.34■□□□□ 0.53
PTPN21-208ENST00000556564 NIF3L1Q9GZT8 377 aa18.34■□□□□ 0.53
PTPN21-208ENST00000556564 CASTOR2A6NHX0 329 aa18.34■□□□□ 0.53
PTPN21-208ENST00000556564 ADCY3O60266 1144 aa18.34■□□□□ 0.53
PTPN21-208ENST00000556564 PNPLA4P41247 253 aa18.34■□□□□ 0.53
PTPN21-208ENST00000556564 KPNA2P52292 529 aaKnown RBP18.34■□□□□ 0.53
PTPN21-208ENST00000556564 EDRF1Q3B7T1 1238 aa18.34■□□□□ 0.53
PTPN21-208ENST00000556564 CCDC144BQ3MJ40 725 aa18.34■□□□□ 0.53
PTPN21-208ENST00000556564 GPAT2Q6NUI2 795 aa18.34■□□□□ 0.53
PTPN21-208ENST00000556564 USP33Q8TEY7 942 aa18.34■□□□□ 0.53
PTPN21-208ENST00000556564 ARHGAP42A6NI28 874 aa18.34■□□□□ 0.53
PTPN21-208ENST00000556564 ARL4CP56559 192 aa18.34■□□□□ 0.53
PTPN21-208ENST00000556564 CYP4A22Q5TCH4 519 aa18.34■□□□□ 0.53
PTPN21-208ENST00000556564 TAS2R42Q7RTR8 314 aa18.34■□□□□ 0.53
PTPN21-208ENST00000556564 CDKL3Q8IVW4 592 aaPredicted RBP18.34■□□□□ 0.53
PTPN21-208ENST00000556564 C1orf54Q8WWF1 131 aa18.34■□□□□ 0.53
PTPN21-208ENST00000556564 EVI5O60447 810 aa18.34■□□□□ 0.53
PTPN21-208ENST00000556564 HSD17B4P51659 736 aa18.34■□□□□ 0.53
PTPN21-208ENST00000556564 IL9RQ01113 521 aa18.34■□□□□ 0.53
PTPN21-208ENST00000556564 RAD51Q06609 339 aa18.34■□□□□ 0.53
PTPN21-208ENST00000556564 ARHGAP15Q53QZ3 475 aa18.34■□□□□ 0.53
PTPN21-208ENST00000556564 SYCP2LQ5T4T6 812 aa18.34■□□□□ 0.53
PTPN21-208ENST00000556564 TDRD10Q5VZ19 366 aaKnown RBP18.34■□□□□ 0.53
PTPN21-208ENST00000556564 OLA1Q9NTK5 396 aaKnown RBP18.34■□□□□ 0.53
PTPN21-208ENST00000556564 PARP4Q9UKK3 1724 aaKnown RBP18.34■□□□□ 0.53
PTPN21-208ENST00000556564 PI4K2BG5E9Z4 385 aa18.34■□□□□ 0.53
PTPN21-208ENST00000556564 CASP4P49662 377 aa18.34■□□□□ 0.53
PTPN21-208ENST00000556564 TOB1P50616 345 aaPredicted RBP18.34■□□□□ 0.53
PTPN21-208ENST00000556564 IL31Q6EBC2 164 aa18.34■□□□□ 0.53
PTPN21-208ENST00000556564 KLC3Q6P597 504 aa18.34■□□□□ 0.53
PTPN21-208ENST00000556564 RFFLQ8WZ73 363 aa18.34■□□□□ 0.53
PTPN21-208ENST00000556564 NFU1Q9UMS0 254 aa18.34■□□□□ 0.53
PTPN21-208ENST00000556564 TBKBP1A7MCY6 615 aa18.33■□□□□ 0.53
PTPN21-208ENST00000556564 SMIM22K7EJ46 135 aa18.33■□□□□ 0.53
PTPN21-208ENST00000556564 SP3Q02447 781 aa18.33■□□□□ 0.53
PTPN21-208ENST00000556564 RBBP5Q15291 538 aaKnown RBP18.33■□□□□ 0.53
PTPN21-208ENST00000556564 BHMTQ93088 406 aa18.33■□□□□ 0.53
PTPN21-208ENST00000556564 RANBP17Q9H2T7 1088 aaKnown RBP18.33■□□□□ 0.53
PTPN21-208ENST00000556564 RAP1GAPP47736 663 aa18.33■□□□□ 0.53
PTPN21-208ENST00000556564 DRP2Q13474 957 aa18.33■□□□□ 0.53
PTPN21-208ENST00000556564 A1CFQ9NQ94 594 aaKnown RBP18.33■□□□□ 0.53
PTPN21-208ENST00000556564 ANKRD26Q9UPS8 1709 aa18.33■□□□□ 0.52
PTPN21-208ENST00000556564 FAM200BP0CF97 657 aa18.33■□□□□ 0.52
PTPN21-208ENST00000556564 PSEN2P49810 448 aa18.33■□□□□ 0.52
PTPN21-208ENST00000556564 SLC26A2P50443 739 aa18.33■□□□□ 0.52
PTPN21-208ENST00000556564 DEUP1Q05D60 604 aa18.33■□□□□ 0.52
PTPN21-208ENST00000556564 GPS1Q13098 491 aa18.33■□□□□ 0.52
PTPN21-208ENST00000556564 DCAF6Q58WW2 860 aa18.33■□□□□ 0.52
PTPN21-208ENST00000556564 KCTD17Q8N5Z5 321 aa18.33■□□□□ 0.52
PTPN21-208ENST00000556564 PPFIBP2Q8ND30 876 aa18.33■□□□□ 0.52
PTPN21-208ENST00000556564 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.33■□□□□ 0.52
PTPN21-208ENST00000556564 EHD2Q9NZN4 543 aa18.33■□□□□ 0.52
PTPN21-208ENST00000556564 NALCNQ8IZF0 1738 aa18.33■□□□□ 0.52
PTPN21-208ENST00000556564 H7C4K7 107 aa18.33■□□□□ 0.52
PTPN21-208ENST00000556564 OGTO15294 1046 aa18.33■□□□□ 0.52
PTPN21-208ENST00000556564 POMCP01189 267 aa18.33■□□□□ 0.52
PTPN21-208ENST00000556564 RASSF3Q86WH2 238 aa18.33■□□□□ 0.52
PTPN21-208ENST00000556564 PURBQ96QR8 312 aaKnown RBP18.33■□□□□ 0.52
PTPN21-208ENST00000556564 FAM86B1E9PN63 330 aa18.32■□□□□ 0.52
PTPN21-208ENST00000556564 FAM86B2P0C5J1 330 aa18.32■□□□□ 0.52
PTPN21-208ENST00000556564 GHRP10912 638 aa18.32■□□□□ 0.52
PTPN21-208ENST00000556564 INHBEP58166 350 aa18.32■□□□□ 0.52
PTPN21-208ENST00000556564 GIT2Q14161 759 aa18.32■□□□□ 0.52
PTPN21-208ENST00000556564 ITPRIPL1Q6GPH6 555 aa18.32■□□□□ 0.52
PTPN21-208ENST00000556564 ARHGAP24Q8N264 748 aa18.32■□□□□ 0.52
PTPN21-208ENST00000556564 TMEM150BA6NC51 233 aa18.32■□□□□ 0.52
PTPN21-208ENST00000556564 CYB561D2O14569 222 aa18.32■□□□□ 0.52
PTPN21-208ENST00000556564 AGPAT5Q9NUQ2 364 aa18.32■□□□□ 0.52
PTPN21-208ENST00000556564 INTS9Q9NV88 658 aaKnown RBP18.32■□□□□ 0.52
PTPN21-208ENST00000556564 STK38LQ9Y2H1 464 aa18.32■□□□□ 0.52
PTPN21-208ENST00000556564 RGPD8O14715 1765 aaPredicted RBP18.32■□□□□ 0.52
PTPN21-208ENST00000556564 CRY2Q49AN0 593 aa18.32■□□□□ 0.52
PTPN21-208ENST00000556564 HDAC6Q9UBN7 1215 aa18.32■□□□□ 0.52
PTPN21-208ENST00000556564 NFAT5O94916 1531 aa18.32■□□□□ 0.52
PTPN21-208ENST00000556564 ATMINO43313 823 aaPredicted RBP18.32■□□□□ 0.52
PTPN21-208ENST00000556564 HOXA2O43364 376 aa18.32■□□□□ 0.52
PTPN21-208ENST00000556564 ZFXP17010 805 aaPredicted RBP18.32■□□□□ 0.52
PTPN21-208ENST00000556564 PAPOLAP51003 745 aaKnown RBP18.32■□□□□ 0.52
PTPN21-208ENST00000556564 CBWD2Q8IUF1 395 aa18.32■□□□□ 0.52
PTPN21-208ENST00000556564 SLC35G2Q8TBE7 412 aa18.32■□□□□ 0.52
PTPN21-208ENST00000556564 SNTG2Q9NY99 539 aa18.32■□□□□ 0.52
PTPN21-208ENST00000556564 SALL3Q9BXA9 1300 aa18.32■□□□□ 0.52
PTPN21-208ENST00000556564 PPP1R12AO14974 1030 aaPredicted RBP18.32■□□□□ 0.52
PTPN21-208ENST00000556564 ANO4Q32M45 955 aa18.32■□□□□ 0.52
PTPN21-208ENST00000556564 PID1Q7Z2X4 250 aa18.32■□□□□ 0.52
PTPN21-208ENST00000556564 ATP8B4Q8TF62 1192 aa18.32■□□□□ 0.52
PTPN21-208ENST00000556564 POP1Q99575 1024 aaKnown RBP18.32■□□□□ 0.52
PTPN21-208ENST00000556564 CAPS2Q9BXY5 557 aa18.32■□□□□ 0.52
PTPN21-208ENST00000556564 METTL5Q9NRN9 209 aaKnown RBP18.32■□□□□ 0.52
PTPN21-208ENST00000556564 PODXLO00592 558 aa18.31■□□□□ 0.52
PTPN21-208ENST00000556564 NCAM1P13591 858 aa18.31■□□□□ 0.52
PTPN21-208ENST00000556564 TREML2Q5T2D2 321 aa18.31■□□□□ 0.52
PTPN21-208ENST00000556564 TMTC4Q5T4D3 741 aa18.31■□□□□ 0.52
PTPN21-208ENST00000556564 RIOX2Q8IUF8 465 aa18.31■□□□□ 0.52
PTPN21-208ENST00000556564 C4orf19Q8IY42 314 aa18.31■□□□□ 0.52
PTPN21-208ENST00000556564 TMEM117Q9H0C3 514 aa18.31■□□□□ 0.52
PTPN21-208ENST00000556564 TMEM88BA6NKF7 163 aa18.31■□□□□ 0.52
PTPN21-208ENST00000556564 TGFB3P10600 412 aa18.31■□□□□ 0.52
PTPN21-208ENST00000556564 KCNB2Q92953 911 aa18.31■□□□□ 0.52
PTPN21-208ENST00000556564 WNK4Q96J92 1243 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms