RNA–Protein interactions for RNA: ENST00000556513.5

HNRNPC-225, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-225ENST00000556513 UBASH3AP57075 661 aa11.29□□□□□ -0.6
HNRNPC-225ENST00000556513 SMAD4Q13485 552 aaKnown RBP11.29□□□□□ -0.6
HNRNPC-225ENST00000556513 PTPN14Q15678 1187 aa11.29□□□□□ -0.6
HNRNPC-225ENST00000556513 FILIP1LQ4L180 1135 aa11.29□□□□□ -0.6
HNRNPC-225ENST00000556513 SEZ6Q53EL9 994 aa11.29□□□□□ -0.6
HNRNPC-225ENST00000556513 MPZL3Q6UWV2 235 aa11.29□□□□□ -0.6
HNRNPC-225ENST00000556513 ZPBP2Q6X784 338 aa11.29□□□□□ -0.6
HNRNPC-225ENST00000556513 SV2BQ7L1I2 683 aa11.29□□□□□ -0.6
HNRNPC-225ENST00000556513 HAUS6Q7Z4H7 955 aa11.29□□□□□ -0.6
HNRNPC-225ENST00000556513 PDILTQ8N807 584 aa11.29□□□□□ -0.6
HNRNPC-225ENST00000556513 SMRP1Q8NCR6 262 aa11.29□□□□□ -0.6
HNRNPC-225ENST00000556513 DHX58Q96C10 678 aa11.29□□□□□ -0.6
HNRNPC-225ENST00000556513 B3GALT6Q96L58 329 aa11.29□□□□□ -0.6
HNRNPC-225ENST00000556513 COLEC11Q9BWP8 271 aa11.29□□□□□ -0.6
HNRNPC-225ENST00000556513 PARVGQ9HBI0 331 aa11.29□□□□□ -0.6
HNRNPC-225ENST00000556513 PTPRHQ9HD43 1115 aa11.29□□□□□ -0.6
HNRNPC-225ENST00000556513 SEL1LQ9UBV2 794 aa11.29□□□□□ -0.6
HNRNPC-225ENST00000556513 RWDD2AQ9UIY3 292 aa11.29□□□□□ -0.6
HNRNPC-225ENST00000556513 FAM50BQ9Y247 325 aa11.29□□□□□ -0.6
HNRNPC-225ENST00000556513 HCFC2Q9Y5Z7 792 aa11.29□□□□□ -0.6
HNRNPC-225ENST00000556513 PVALEFA0A1B0GWK0 134 aa11.28□□□□□ -0.6
HNRNPC-225ENST00000556513 GOLGA6L9A6NEM1 432 aa11.28□□□□□ -0.6
HNRNPC-225ENST00000556513 TADA2AO75478 443 aa11.28□□□□□ -0.6
HNRNPC-225ENST00000556513 RHOBTB3O94955 611 aa11.28□□□□□ -0.6
HNRNPC-225ENST00000556513 SERPINC1P01008 464 aa11.28□□□□□ -0.6
HNRNPC-225ENST00000556513 SRGAP2BP0DMP2 458 aa11.28□□□□□ -0.6
HNRNPC-225ENST00000556513 PROZP22891 400 aa11.28□□□□□ -0.6
HNRNPC-225ENST00000556513 NMT1P30419 496 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-225ENST00000556513 GRM5P41594 1212 aa11.28□□□□□ -0.6
HNRNPC-225ENST00000556513 COASYQ13057 564 aa11.28□□□□□ -0.6
HNRNPC-225ENST00000556513 PSMD2Q13200 908 aa11.28□□□□□ -0.6
HNRNPC-225ENST00000556513 TUSC3Q13454 348 aa11.28□□□□□ -0.6
HNRNPC-225ENST00000556513 CUL4BQ13620 913 aa11.28□□□□□ -0.6
HNRNPC-225ENST00000556513 KCNC3Q14003 757 aa11.28□□□□□ -0.6
HNRNPC-225ENST00000556513 HSP90AA2PQ14568 343 aaPredicted RBP11.28□□□□□ -0.6
HNRNPC-225ENST00000556513 SMAD2Q15796 467 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-225ENST00000556513 ANKRD54Q6NXT1 300 aa11.28□□□□□ -0.6
HNRNPC-225ENST00000556513 KHSRPQ92945 711 aaKnown RBP eCLIP11.28□□□□□ -0.62e-7■■■□□ 17.4
HNRNPC-225ENST00000556513 DNAJC19Q96DA6 116 aa11.28□□□□□ -0.6
HNRNPC-225ENST00000556513 DHTKD1Q96HY7 919 aaPredicted RBP11.28□□□□□ -0.6
HNRNPC-225ENST00000556513 FIZ1Q96SL8 496 aa11.28□□□□□ -0.6
HNRNPC-225ENST00000556513 C7orf25Q9BPX7 421 aa11.28□□□□□ -0.6
HNRNPC-225ENST00000556513 CCDC94Q9BW85 323 aaPredicted RBP11.28□□□□□ -0.6
HNRNPC-225ENST00000556513 GPR62Q9BZJ7 368 aa11.28□□□□□ -0.6
HNRNPC-225ENST00000556513 GOLGA2P5Q9HBQ8 144 aa11.28□□□□□ -0.6
HNRNPC-225ENST00000556513 MRPL17Q9NRX2 175 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-225ENST00000556513 ADAM28Q9UKQ2 775 aa11.28□□□□□ -0.6
HNRNPC-225ENST00000556513 USP15Q9Y4E8 981 aaPredicted RBP11.28□□□□□ -0.6
HNRNPC-225ENST00000556513 PAXBP1Q9Y5B6 917 aa11.28□□□□□ -0.6
HNRNPC-225ENST00000556513 MYO10Q9HD67 2058 aa11.28□□□□□ -0.6
HNRNPC-225ENST00000556513 FRMD3A2A2Y4 597 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 MYMKA6NI61 221 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 ABLIM1O14639 778 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 TOM1L1O75674 476 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 KIF4AO95239 1232 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 PIGRP01833 764 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 URODP06132 367 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 CNPP09543 421 aaKnown RBP11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 MCF2P10911 925 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 EPCAMP16422 314 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 GAP43P17677 238 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 CDK11BP21127 795 aaKnown RBP11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 BMP6P22004 513 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 KLRC2P26717 231 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 GLUD2P49448 558 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 YARSP54577 528 aaKnown RBP11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 NAB2Q15742 525 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 CDKAL1Q5VV42 579 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 KIAA1841Q6NSI8 718 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 FUT10Q6P4F1 479 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 SYCE2Q6PIF2 218 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 VSTM4Q8IW00 320 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 GJD3Q8N144 294 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 DDX12PQ92771 950 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 HVCN1Q96D96 273 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 PPP1R10Q96QC0 940 aaKnown RBP11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 HERC2P3Q9BVR0 1158 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 EMILIN2Q9BXX0 1053 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 XPO4Q9C0E2 1151 aaKnown RBP11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 HSD3B7Q9H2F3 369 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 OLFML3Q9NRN5 406 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 TOPORSQ9NS56 1045 aaPredicted RBP11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 IFNKQ9P0W0 207 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 STK39Q9UEW8 545 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 CDH22Q9UJ99 828 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 TBX20Q9UMR3 447 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 NFE2L3Q9Y4A8 694 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 IRAK3Q9Y616 596 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 DOCK6Q96HP0 2047 aa11.27□□□□□ -0.6
HNRNPC-225ENST00000556513 ITIH6Q6UXX5 1313 aa11.27□□□□□ -0.61
HNRNPC-225ENST00000556513 SMIM28A0A1B0GU29 152 aa11.26□□□□□ -0.61
HNRNPC-225ENST00000556513 BICDL2A1A5D9 508 aa11.26□□□□□ -0.61
HNRNPC-225ENST00000556513 BIN1O00499 593 aa11.26□□□□□ -0.61
HNRNPC-225ENST00000556513 HNRNPDLO14979 420 aaKnown RBP11.26□□□□□ -0.61
HNRNPC-225ENST00000556513 CLDN3O15551 220 aa11.26□□□□□ -0.61
HNRNPC-225ENST00000556513 RPN1P04843 607 aaKnown RBP11.26□□□□□ -0.61
HNRNPC-225ENST00000556513 MYBP10242 640 aa11.26□□□□□ -0.61
HNRNPC-225ENST00000556513 LIG4P49917 911 aa11.26□□□□□ -0.61
HNRNPC-225ENST00000556513 GTF2BQ00403 316 aa11.26□□□□□ -0.61
HNRNPC-225ENST00000556513 ZP2Q05996 745 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms