RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 E4F1Q66K89 784 aaPredicted RBP8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 SLC27A1Q6PCB7 646 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 GJB7Q6PEY0 223 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 TRIM65Q6PJ69 517 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 SLC39A5Q6ZMH5 540 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 PPFIBP1Q86W92 1011 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 NEK11Q8NG66 645 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 OR5B17Q8NGF7 314 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 CPLX3Q8WVH0 158 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 PCMTD1Q96MG8 357 aaPredicted RBP8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 ADPGKQ9BRR6 497 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 NUP58Q9BVL2 599 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 INTS2Q9H0H0 1204 aaKnown RBP8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 CXCL16Q9H2A7 254 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 TMX1Q9H3N1 280 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 NXF3Q9H4D5 531 aaKnown RBP8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 RPF1Q9H9Y2 349 aaKnown RBP8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 PLCB1Q9NQ66 1216 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 ST3GAL5Q9UNP4 418 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 NOD1Q9Y239 953 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 COQ4Q9Y3A0 265 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 HES2Q9Y543 173 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 FHOD1Q9Y613 1164 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 MICAL3Q7RTP6 2002 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 TDRD15B5MCY1 1934 aaKnown RBP8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 TNRC18O15417 2968 aaPredicted RBP8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 LACTBL1A8MY62 500 aa8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 STX10O60499 249 aa8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 NFICP08651 508 aa8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 KRT9P35527 623 aa8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 GGCXP38435 758 aa8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 POU5F1Q01860 360 aaKnown RBP8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 HSP90AA2PQ14568 343 aaPredicted RBP8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 DSC3Q14574 896 aa8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 GPNMBQ14956 572 aa8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 TRIM60Q495X7 471 aa8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 KLHDC7AQ5VTJ3 777 aa8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 KRT39Q6A163 491 aa8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 PDXDC1Q6P996 788 aa8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 ARHGEF19Q8IW93 802 aa8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 SMG8Q8ND04 991 aaKnown RBP8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 TAS1R2Q8TE23 839 aa8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 ELMO3Q96BJ8 720 aa8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 TRIM44Q96DX7 344 aaPredicted RBP8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 CCDC51Q96ER9 411 aa8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 SNX27Q96L92 541 aa8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 PANX2Q96RD6 677 aa8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 FNBP1Q96RU3 617 aa8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 DNAJC7Q99615 494 aa8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 NAA15Q9BXJ9 866 aaKnown RBP8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 SEZ6LQ9BYH1 1024 aa8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 MTMR12Q9C0I1 747 aa8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 NLRC4Q9NPP4 1024 aa8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 ABHD10Q9NUJ1 306 aa8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 SNTG2Q9NY99 539 aa8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 CEP72Q9P209 647 aa8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 PYCARDQ9ULZ3 195 aa8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 UMODL1Q5DID0 1318 aa8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 MROH7Q68CQ1 1323 aa8.75□□□□□ -1.01
DEPDC4-207ENST00000549249 LRRC53A6NM62 1247 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 H0YGN5 161 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 PQBP1O60828 265 aaKnown RBP8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 RECQL4O94761 1208 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 IL18RAPO95256 599 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 HLA-DRAP01903 254 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 UCHL3P15374 230 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 TNNI1P19237 187 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 POLR2FP61218 127 aaKnown RBP8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 ZBED6P86452 979 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 NFX1Q12986 1120 aaKnown RBP8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 SURF1Q15526 300 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 KYAT1Q16773 422 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 C1orf53Q5VUE5 145 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 JADE1Q6IE81 842 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 IQCEQ6IPM2 695 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 PHLDB3Q6NSJ2 640 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 WDR59Q6PJI9 974 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 LRRC8DQ7L1W4 858 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 ANKRD33Q7Z3H0 272 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 USP37Q86T82 979 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 WDR49Q8IV35 697 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 CNGA4Q8IV77 575 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 ANKLE1Q8NAG6 615 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 EHBP1Q8NDI1 1231 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 CXorf38Q8TB03 319 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 CAGE1Q8TC20 777 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 IQCDQ96DY2 449 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 ACAP3Q96P50 834 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 PI4K2AQ9BTU6 479 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 CCDC94Q9BW85 323 aaPredicted RBP8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 APOL6Q9BWW8 343 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 EDEM3Q9BZQ6 932 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 GPR88Q9GZN0 384 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 FBXL5Q9UKA1 691 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 PADI3Q9ULW8 664 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 ZKSCAN5Q9Y2L8 839 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 LUC7L2Q9Y383 392 aaKnown RBP8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 IPPQ9Y573 584 aa8.74□□□□□ -1.01
DEPDC4-207ENST00000549249 SQORQ9Y6N5 450 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms