RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 PHIPQ8WWQ0 1821 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 LOC285556D6RIA3 1793 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 ESYT2A0FGR8 921 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 PODXLO00592 558 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 ABLIM1O14639 778 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 TMEM253P0C7T8 217 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 RARGP13631 454 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 CCNB1P14635 433 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 ABCB4P21439 1286 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 RPL21P46778 160 aaKnown RBP5.55□□□□□ -1.52
PROM1-220ENST00000540805 CLK2P49760 499 aaKnown RBP5.55□□□□□ -1.52
PROM1-220ENST00000540805 ROR2Q01974 943 aaKnown RBP5.55□□□□□ -1.52
PROM1-220ENST00000540805 DEUP1Q05D60 604 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 LRRC23Q53EV4 343 aaPredicted RBP5.55□□□□□ -1.52
PROM1-220ENST00000540805 TNFAIP8L3Q5GJ75 292 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 SCYL2Q6P3W7 929 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 HHIPL2Q6UWX4 724 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 OTUD6AQ7L8S5 288 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 APBB1IPQ7Z5R6 666 aaPredicted RBP5.55□□□□□ -1.52
PROM1-220ENST00000540805 ANKRD23Q86SG2 305 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 FITM2Q8N6M3 262 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 SCFD1Q8WVM8 642 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 ARHGEF2Q92974 986 aaKnown RBP5.55□□□□□ -1.52
PROM1-220ENST00000540805 P2RX7Q99572 595 aaKnown RBP5.55□□□□□ -1.52
PROM1-220ENST00000540805 MAK16Q9BXY0 300 aaKnown RBP5.55□□□□□ -1.52
PROM1-220ENST00000540805 IQCGQ9H095 443 aaKnown RBP5.55□□□□□ -1.52
PROM1-220ENST00000540805 ETNK1Q9HBU6 452 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 MTMR4Q9NYA4 1195 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 LARSQ9P2J5 1176 aaKnown RBP5.55□□□□□ -1.52
PROM1-220ENST00000540805 SEPT9Q9UHD8 586 aaPredicted RBP5.55□□□□□ -1.52
PROM1-220ENST00000540805 PPP1R9AQ9ULJ8 1098 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 KIAA1024Q9UPX6 916 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 SYNGAP1Q96PV0 1343 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 RLFQ13129 1914 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.55□□□□□ -1.52
PROM1-220ENST00000540805 E7ENQ6 273 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 ECE2O60344 883 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 SRGAP2CP0DJJ0 459 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 AKR1B1P15121 316 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 LMNB1P20700 586 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 STAT1P42224 750 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 PTGIRP43119 386 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 CRKP46108 304 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 RAD23BP54727 409 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 ARHGEF6Q15052 776 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 ECM1Q16610 540 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 UBE2SQ16763 222 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 TSNAXIP1Q2TAA8 658 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 MTERF2Q49AM1 385 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 ODR4Q5SWX8 454 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 RNF43Q68DV7 783 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 DPY19L2P1Q6NXN4 242 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 ZBTB8OSQ8IWT0 167 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 DNAJC5GQ8N7S2 189 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 C7orf31Q8N865 590 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 GDAP1Q8TB36 358 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 LNX1Q8TBB1 728 aaPredicted RBP5.55□□□□□ -1.52
PROM1-220ENST00000540805 CKAP2Q8WWK9 683 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 C18orf8Q96DM3 657 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 TSNARE1Q96NA8 513 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 TMEM237Q96Q45 408 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 TGS1Q96RS0 853 aaKnown RBP5.55□□□□□ -1.52
PROM1-220ENST00000540805 GMLQ99445 158 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 RNPEPL1Q9HAU8 725 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 GCNT4Q9P109 453 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 CTTNBP2NLQ9P2B4 639 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 WDR35Q9P2L0 1181 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 CNTNAP1P78357 1384 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 MYO3BQ8WXR4 1341 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 PITPNM2Q9BZ72 1349 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 DDTLA6NHG4 134 aaPredicted RBP5.55□□□□□ -1.52
PROM1-220ENST00000540805 ZBBXA8MT70 800 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 E9PMD0 336 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 hCG_1984214I3L0E3 225 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 HNRNPDLO14979 420 aaKnown RBP5.55□□□□□ -1.52
PROM1-220ENST00000540805 HNRNPRO43390 633 aaKnown RBP5.55□□□□□ -1.52
PROM1-220ENST00000540805 CALUO43852 315 aaPredicted RBP5.55□□□□□ -1.52
PROM1-220ENST00000540805 BNIP3LO60238 219 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 UNC5CO95185 931 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 TTLL1O95922 423 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 PLA2G4BP0C869 781 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 STX2P32856 288 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 JAM2P57087 298 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 PPATQ06203 517 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 CCDC15Q0P6D6 951 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 EPHA7Q15375 998 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 LONRF1Q17RB8 773 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 P3H1Q32P28 736 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 SEL1L2Q5TEA6 688 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 TATDN1Q6P1N9 297 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 AGGF1Q8N302 714 aaeCLIP5.55□□□□□ -1.52
PROM1-220ENST00000540805 PPM1KQ8N3J5 372 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 GALNT15Q8N3T1 639 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 ZNF713Q8N859 430 aaPredicted RBP5.55□□□□□ -1.52
PROM1-220ENST00000540805 DNAJC1Q96KC8 554 aaKnown RBP5.55□□□□□ -1.52
PROM1-220ENST00000540805 RMDN2Q96LZ7 410 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 GPBP1L1Q9HC44 474 aaPredicted RBP5.55□□□□□ -1.52
PROM1-220ENST00000540805 DDX25Q9UHL0 483 aaKnown RBP5.55□□□□□ -1.52
PROM1-220ENST00000540805 AJAP1Q9UKB5 411 aaPredicted RBP5.55□□□□□ -1.52
PROM1-220ENST00000540805 PCDHA2Q9Y5H9 948 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms