RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 DKC1O60832 514 aaKnown RBP eCLIP12.31□□□□□ -0.44
C11orf54-214ENST00000540113 VNN1O95497 513 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 PIK3CAP42336 1068 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 IFT88Q13099 833 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 XKR3Q5GH77 459 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 DENND2CQ68D51 928 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 MIS18BP1Q6P0N0 1132 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 PRUNE1Q86TP1 453 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 MCOLN2Q8IZK6 566 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 KAT2BQ92831 832 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 SELENOSQ9BQE4 189 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 PABPC3Q9H361 631 aaKnown RBP12.31□□□□□ -0.44
C11orf54-214ENST00000540113 A0A087WUV0 522 aaPredicted RBP12.3□□□□□ -0.44
C11orf54-214ENST00000540113 GMNCA6NCL1 334 aa12.3□□□□□ -0.44
C11orf54-214ENST00000540113 UNGP13051 313 aaPredicted RBP12.3□□□□□ -0.44
C11orf54-214ENST00000540113 GARTP22102 1010 aa12.3□□□□□ -0.44
C11orf54-214ENST00000540113 ICAM3P32942 547 aa12.3□□□□□ -0.44
C11orf54-214ENST00000540113 PPP1R7Q15435 360 aa12.3□□□□□ -0.44
C11orf54-214ENST00000540113 TTC31Q49AM3 519 aaPredicted RBP12.3□□□□□ -0.44
C11orf54-214ENST00000540113 FBXW10Q5XX13 1052 aa12.3□□□□□ -0.44
C11orf54-214ENST00000540113 CRELD2Q6UXH1 353 aaPredicted RBP12.3□□□□□ -0.44
C11orf54-214ENST00000540113 ARFGAP2Q8N6H7 521 aa12.3□□□□□ -0.44
C11orf54-214ENST00000540113 PPM1EQ8WY54 764 aa12.3□□□□□ -0.44
C11orf54-214ENST00000540113 FNBP1Q96RU3 617 aa12.3□□□□□ -0.44
C11orf54-214ENST00000540113 CEP89Q96ST8 783 aa12.3□□□□□ -0.44
C11orf54-214ENST00000540113 C11orf70Q9BRQ4 267 aa12.3□□□□□ -0.44
C11orf54-214ENST00000540113 SYT17Q9BSW7 474 aa12.3□□□□□ -0.44
C11orf54-214ENST00000540113 DDX23Q9BUQ8 820 aaKnown RBP12.3□□□□□ -0.44
C11orf54-214ENST00000540113 TARS2Q9BW92 718 aaKnown RBP12.3□□□□□ -0.44
C11orf54-214ENST00000540113 R3HDMLQ9H3Y0 253 aa12.3□□□□□ -0.44
C11orf54-214ENST00000540113 APOBEC3GQ9HC16 384 aaKnown RBP12.3□□□□□ -0.44
C11orf54-214ENST00000540113 USTQ9Y2C2 406 aa12.3□□□□□ -0.44
C11orf54-214ENST00000540113 R3HDM2Q9Y2K5 976 aaKnown RBP12.3□□□□□ -0.44
C11orf54-214ENST00000540113 SBF1O95248 1867 aa12.3□□□□□ -0.44
C11orf54-214ENST00000540113 A6NNZ2 444 aa12.3□□□□□ -0.44
C11orf54-214ENST00000540113 ATG7O95352 703 aa12.3□□□□□ -0.44
C11orf54-214ENST00000540113 FAM107AO95990 144 aa12.3□□□□□ -0.44
C11orf54-214ENST00000540113 KRT17Q04695 432 aa12.3□□□□□ -0.44
C11orf54-214ENST00000540113 STXBP2Q15833 593 aa12.3□□□□□ -0.44
C11orf54-214ENST00000540113 PPP2R5EQ16537 467 aa12.3□□□□□ -0.44
C11orf54-214ENST00000540113 TUBB8Q3ZCM7 444 aa12.3□□□□□ -0.44
C11orf54-214ENST00000540113 SGO2Q562F6 1265 aa12.3□□□□□ -0.44
C11orf54-214ENST00000540113 BRDTQ58F21 947 aaPredicted RBP12.3□□□□□ -0.44
C11orf54-214ENST00000540113 LBX2Q6XYB7 198 aa12.3□□□□□ -0.44
C11orf54-214ENST00000540113 EEPD1Q7L9B9 569 aa12.3□□□□□ -0.44
C11orf54-214ENST00000540113 CHST13Q8NET6 341 aa12.3□□□□□ -0.44
C11orf54-214ENST00000540113 OR5B17Q8NGF7 314 aa12.3□□□□□ -0.44
C11orf54-214ENST00000540113 KLHL11Q9NVR0 708 aa12.3□□□□□ -0.44
C11orf54-214ENST00000540113 UVRAGQ9P2Y5 699 aa12.3□□□□□ -0.44
C11orf54-214ENST00000540113 AGO2Q9UKV8 859 aaKnown RBP12.3□□□□□ -0.44
C11orf54-214ENST00000540113 MTUS1Q9ULD2 1270 aa12.3□□□□□ -0.44
C11orf54-214ENST00000540113 MAFBQ9Y5Q3 323 aaPredicted RBP12.3□□□□□ -0.44
C11orf54-214ENST00000540113 TRAPPC3O43617 180 aa12.29□□□□□ -0.44
C11orf54-214ENST00000540113 EXTL3O43909 919 aa12.29□□□□□ -0.44
C11orf54-214ENST00000540113 GLRA2P23416 452 aa12.29□□□□□ -0.44
C11orf54-214ENST00000540113 CHKAP35790 457 aa12.29□□□□□ -0.44
C11orf54-214ENST00000540113 SSR1P43307 286 aaKnown RBP12.29□□□□□ -0.44
C11orf54-214ENST00000540113 ALDH5A1P51649 535 aaPredicted RBP12.29□□□□□ -0.44
C11orf54-214ENST00000540113 DRP2Q13474 957 aa12.29□□□□□ -0.44
C11orf54-214ENST00000540113 TMEM270Q6UE05 265 aa12.29□□□□□ -0.44
C11orf54-214ENST00000540113 C15orf39Q6ZRI6 1047 aa12.29□□□□□ -0.44
C11orf54-214ENST00000540113 B4GALNT4Q76KP1 1039 aa12.29□□□□□ -0.44
C11orf54-214ENST00000540113 CCDC50Q8IVM0 306 aa12.29□□□□□ -0.44
C11orf54-214ENST00000540113 TLCD1Q96CP7 247 aa12.29□□□□□ -0.44
C11orf54-214ENST00000540113 ZNF668Q96K58 619 aaPredicted RBP12.29□□□□□ -0.44
C11orf54-214ENST00000540113 PCYT2Q99447 389 aa12.29□□□□□ -0.44
C11orf54-214ENST00000540113 CCDC113Q9H0I3 377 aa12.29□□□□□ -0.44
C11orf54-214ENST00000540113 ZNF302Q9NR11 478 aa12.29□□□□□ -0.44
C11orf54-214ENST00000540113 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.29□□□□□ -0.44
C11orf54-214ENST00000540113 FBXO40Q9UH90 709 aa12.29□□□□□ -0.44
C11orf54-214ENST00000540113 DDX20Q9UHI6 824 aaKnown RBP12.29□□□□□ -0.44
C11orf54-214ENST00000540113 SOWAHBA6NEL2 793 aa12.29□□□□□ -0.44
C11orf54-214ENST00000540113 ECEL1O95672 775 aa12.29□□□□□ -0.44
C11orf54-214ENST00000540113 C4BPAP04003 597 aaKnown RBP12.29□□□□□ -0.44
C11orf54-214ENST00000540113 OATP04181 439 aa12.29□□□□□ -0.44
C11orf54-214ENST00000540113 UBA1P22314 1058 aaKnown RBP12.29□□□□□ -0.44
C11orf54-214ENST00000540113 GTF2H1P32780 548 aa12.29□□□□□ -0.44
C11orf54-214ENST00000540113 GCNT1Q02742 428 aa12.29□□□□□ -0.44
C11orf54-214ENST00000540113 STRN3Q13033 797 aa12.29□□□□□ -0.44
C11orf54-214ENST00000540113 WDR44Q5JSH3 913 aa12.29□□□□□ -0.44
C11orf54-214ENST00000540113 ANKS1BQ7Z6G8 1248 aa12.29□□□□□ -0.44
C11orf54-214ENST00000540113 ANKRD35Q8N283 1001 aa12.29□□□□□ -0.44
C11orf54-214ENST00000540113 OTUD6BQ8N6M0 293 aa12.29□□□□□ -0.44
C11orf54-214ENST00000540113 DNERQ8NFT8 737 aa12.29□□□□□ -0.44
C11orf54-214ENST00000540113 MAF1Q9H063 256 aa12.29□□□□□ -0.44
C11orf54-214ENST00000540113 DHX33Q9H6R0 707 aaKnown RBP12.29□□□□□ -0.44
C11orf54-214ENST00000540113 PCDHB4Q9Y5E5 795 aa12.29□□□□□ -0.44
C11orf54-214ENST00000540113 CAPN7Q9Y6W3 813 aa12.29□□□□□ -0.44
C11orf54-214ENST00000540113 IGKV6D-21A0A0A0MT36 114 aa12.28□□□□□ -0.44
C11orf54-214ENST00000540113 GSTTP1A0A1W2PQM5 241 aa12.28□□□□□ -0.44
C11orf54-214ENST00000540113 ADM5C9JUS6 153 aa12.28□□□□□ -0.44
C11orf54-214ENST00000540113 PODXLO00592 558 aa12.28□□□□□ -0.44
C11orf54-214ENST00000540113 TP73O15350 636 aa12.28□□□□□ -0.44
C11orf54-214ENST00000540113 MEFVO15553 781 aaPredicted RBP12.28□□□□□ -0.44
C11orf54-214ENST00000540113 RIPK2O43353 540 aa12.28□□□□□ -0.44
C11orf54-214ENST00000540113 ATP2C2O75185 946 aa12.28□□□□□ -0.44
C11orf54-214ENST00000540113 KIAA0754O94854 1291 aa12.28□□□□□ -0.44
C11orf54-214ENST00000540113 ACSL3O95573 720 aa12.28□□□□□ -0.44
C11orf54-214ENST00000540113 CHN1P15882 459 aa12.28□□□□□ -0.44
C11orf54-214ENST00000540113 HSPA6P17066 643 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms