RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 MCAMP43121 646 aa7.16□□□□□ -1.26
CCDC7-209ENST00000539197 GPR3P46089 330 aa7.16□□□□□ -1.26
CCDC7-209ENST00000539197 CACNA2D1P54289 1103 aa7.16□□□□□ -1.26
CCDC7-209ENST00000539197 NOMO3P69849 1222 aa7.16□□□□□ -1.26
CCDC7-209ENST00000539197 NHLH1Q02575 133 aa7.16□□□□□ -1.26
CCDC7-209ENST00000539197 NOMO2Q5JPE7 1267 aa7.16□□□□□ -1.26
CCDC7-209ENST00000539197 NPM2Q86SE8 214 aaKnown RBP7.16□□□□□ -1.26
CCDC7-209ENST00000539197 ZGPATQ8N5A5 531 aaKnown RBP7.16□□□□□ -1.26
CCDC7-209ENST00000539197 ACTRT2Q8TDY3 377 aa7.16□□□□□ -1.26
CCDC7-209ENST00000539197 ZNF384Q8TF68 577 aa7.16□□□□□ -1.26
CCDC7-209ENST00000539197 PTCD3Q96EY7 689 aaKnown RBP7.16□□□□□ -1.26
CCDC7-209ENST00000539197 TMEM140Q9NV12 185 aa7.16□□□□□ -1.26
CCDC7-209ENST00000539197 PCDHGA2Q9Y5H1 932 aa7.16□□□□□ -1.26
CCDC7-209ENST00000539197 TEX33O43247 280 aa7.15□□□□□ -1.26
CCDC7-209ENST00000539197 CKBP12277 381 aa7.15□□□□□ -1.26
CCDC7-209ENST00000539197 KRTAP10-11P60412 298 aa7.15□□□□□ -1.26
CCDC7-209ENST00000539197 GEN1Q17RS7 908 aa7.15□□□□□ -1.26
CCDC7-209ENST00000539197 ANO4Q32M45 955 aa7.15□□□□□ -1.26
CCDC7-209ENST00000539197 CCHCR1Q8TD31 782 aa7.15□□□□□ -1.26
CCDC7-209ENST00000539197 CASKIN2Q8WXE0 1202 aa7.15□□□□□ -1.26
CCDC7-209ENST00000539197 PDLIM2Q96JY6 352 aa7.15□□□□□ -1.26
CCDC7-209ENST00000539197 ADI1Q9BV57 179 aa7.15□□□□□ -1.26
CCDC7-209ENST00000539197 IL17RBQ9NRM6 502 aa7.15□□□□□ -1.26
CCDC7-209ENST00000539197 TBX22Q9Y458 520 aa7.15□□□□□ -1.26
CCDC7-209ENST00000539197 TCRBV7S2A1N4TA0A589 114 aa7.14□□□□□ -1.27
CCDC7-209ENST00000539197 ERN1O75460 977 aaKnown RBP7.14□□□□□ -1.27
CCDC7-209ENST00000539197 ENDOD1O94919 500 aa7.14□□□□□ -1.27
CCDC7-209ENST00000539197 AMY1AP04745 511 aa7.14□□□□□ -1.27
CCDC7-209ENST00000539197 VAV2P52735 878 aa7.14□□□□□ -1.27
CCDC7-209ENST00000539197 TMPRSS15P98073 1019 aa7.14□□□□□ -1.27
CCDC7-209ENST00000539197 MALLQ13021 153 aa7.14□□□□□ -1.27
CCDC7-209ENST00000539197 STAT4Q14765 748 aa7.14□□□□□ -1.27
CCDC7-209ENST00000539197 COLGALT2Q8IYK4 626 aa7.14□□□□□ -1.27
CCDC7-209ENST00000539197 SLC2A13Q96QE2 648 aa7.14□□□□□ -1.27
CCDC7-209ENST00000539197 KLK15Q9H2R5 256 aa7.14□□□□□ -1.27
CCDC7-209ENST00000539197 GSTO2Q9H4Y5 243 aa7.14□□□□□ -1.27
CCDC7-209ENST00000539197 KCTD5Q9NXV2 234 aa7.14□□□□□ -1.27
CCDC7-209ENST00000539197 SLC17A6Q9P2U8 582 aa7.14□□□□□ -1.27
CCDC7-209ENST00000539197 CDHR4A6H8M9 788 aa7.13□□□□□ -1.27
CCDC7-209ENST00000539197 MYADML2A6NDP7 307 aa7.13□□□□□ -1.27
CCDC7-209ENST00000539197 RBMXL2O75526 392 aaKnown RBP7.13□□□□□ -1.27
CCDC7-209ENST00000539197 ALAS1P13196 640 aa7.13□□□□□ -1.27
CCDC7-209ENST00000539197 SEM1Q6ZVN7 128 aa7.13□□□□□ -1.27
CCDC7-209ENST00000539197 HEPHQ9BQS7 1158 aa7.13□□□□□ -1.27
CCDC7-209ENST00000539197 CCM2LQ9NUG4 571 aaPredicted RBP7.13□□□□□ -1.27
CCDC7-209ENST00000539197 DNAJC28Q9NX36 388 aa7.13□□□□□ -1.27
CCDC7-209ENST00000539197 SLFN5Q08AF3 891 aa7.12□□□□□ -1.27
CCDC7-209ENST00000539197 MTM1Q13496 603 aa7.12□□□□□ -1.27
CCDC7-209ENST00000539197 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.12□□□□□ -1.27
CCDC7-209ENST00000539197 LNX2Q8N448 690 aa7.12□□□□□ -1.27
CCDC7-209ENST00000539197 AFAP1L2Q8N4X5 818 aa7.12□□□□□ -1.27
CCDC7-209ENST00000539197 DPF2Q92785 391 aa7.12□□□□□ -1.27
CCDC7-209ENST00000539197 ASB6Q9NWX5 421 aa7.12□□□□□ -1.27
CCDC7-209ENST00000539197 VSX1Q9NZR4 365 aaPredicted RBP7.12□□□□□ -1.27
CCDC7-209ENST00000539197 DNM3Q9UQ16 869 aa7.12□□□□□ -1.27
CCDC7-209ENST00000539197 GPR32O75388 356 aa7.11□□□□□ -1.27
CCDC7-209ENST00000539197 PRKD3O94806 890 aa7.11□□□□□ -1.27
CCDC7-209ENST00000539197 SLC5A3P53794 718 aa7.11□□□□□ -1.27
CCDC7-209ENST00000539197 MGAT2Q10469 447 aa7.11□□□□□ -1.27
CCDC7-209ENST00000539197 PAPD7Q5XG87 772 aaKnown RBP7.11□□□□□ -1.27
CCDC7-209ENST00000539197 FITM2Q8N6M3 262 aa7.11□□□□□ -1.27
CCDC7-209ENST00000539197 Q8NA96 180 aa7.11□□□□□ -1.27
CCDC7-209ENST00000539197 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.11□□□□□ -1.27
CCDC7-209ENST00000539197 SSH3Q8TE77 659 aa7.11□□□□□ -1.27
CCDC7-209ENST00000539197 NUP133Q8WUM0 1156 aa7.11□□□□□ -1.27
CCDC7-209ENST00000539197 RAB24Q969Q5 203 aa7.11□□□□□ -1.27
CCDC7-209ENST00000539197 CYFIP2Q96F07 1278 aa7.11□□□□□ -1.27
CCDC7-209ENST00000539197 MED15Q96RN5 788 aa7.11□□□□□ -1.27
CCDC7-209ENST00000539197 PNKPQ96T60 521 aa7.11□□□□□ -1.27
CCDC7-209ENST00000539197 CAAP1Q9H8G2 361 aa7.11□□□□□ -1.27
CCDC7-209ENST00000539197 PEX1O43933 1283 aa7.1□□□□□ -1.27
CCDC7-209ENST00000539197 BRINP1O60477 761 aa7.1□□□□□ -1.27
CCDC7-209ENST00000539197 PROP1O75360 226 aa7.1□□□□□ -1.27
CCDC7-209ENST00000539197 FCER1AP12319 257 aa7.1□□□□□ -1.27
CCDC7-209ENST00000539197 MTNR1BP49286 362 aa7.1□□□□□ -1.27
CCDC7-209ENST00000539197 FAPQ12884 760 aa7.1□□□□□ -1.27
CCDC7-209ENST00000539197 FOXF2Q12947 444 aa7.1□□□□□ -1.27
CCDC7-209ENST00000539197 SRRM1Q8IYB3 904 aaKnown RBP7.1□□□□□ -1.27
CCDC7-209ENST00000539197 COG1Q8WTW3 980 aa7.1□□□□□ -1.27
CCDC7-209ENST00000539197 AHCYL2Q96HN2 611 aaKnown RBP7.1□□□□□ -1.27
CCDC7-209ENST00000539197 TRGV11A0A075B6L2 103 aa7.09□□□□□ -1.27
CCDC7-209ENST00000539197 KIAA0391O15091 583 aaKnown RBP7.09□□□□□ -1.27
CCDC7-209ENST00000539197 EYA4O95677 639 aa7.09□□□□□ -1.27
CCDC7-209ENST00000539197 SLC6A4P31645 630 aa7.09□□□□□ -1.27
CCDC7-209ENST00000539197 SOX5P35711 763 aa7.09□□□□□ -1.27
CCDC7-209ENST00000539197 ATP8B2P98198 1209 aa7.09□□□□□ -1.27
CCDC7-209ENST00000539197 SF3B3Q15393 1217 aaKnown RBP7.09□□□□□ -1.27
CCDC7-209ENST00000539197 AKNAD1Q5T1N1 836 aa7.09□□□□□ -1.27
CCDC7-209ENST00000539197 DCBLD1Q8N8Z6 715 aa7.09□□□□□ -1.27
CCDC7-209ENST00000539197 TBC1D15Q8TC07 691 aa7.09□□□□□ -1.27
CCDC7-209ENST00000539197 MYBBP1AQ9BQG0 1328 aaKnown RBP7.08□□□□□ -1.28
CCDC7-209ENST00000539197 FAM171A2A8MVW0 826 aa7.08□□□□□ -1.28
CCDC7-209ENST00000539197 DDCP20711 480 aa7.08□□□□□ -1.28
CCDC7-209ENST00000539197 PROK1P58294 105 aa7.08□□□□□ -1.28
CCDC7-209ENST00000539197 EPHA10Q5JZY3 1008 aa7.08□□□□□ -1.28
CCDC7-209ENST00000539197 TLR10Q9BXR5 811 aa7.08□□□□□ -1.28
CCDC7-209ENST00000539197 MANSC1Q9H8J5 431 aa7.08□□□□□ -1.28
CCDC7-209ENST00000539197 COL3A1P02461 1466 aaPredicted RBP7.07□□□□□ -1.28
CCDC7-209ENST00000539197 FOLR3P41439 243 aa7.07□□□□□ -1.28
CCDC7-209ENST00000539197 MASP1P48740 699 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms