RNA–Protein interactions for RNA: ENST00000532500.1

CPNE7-206, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-206ENST00000532500 SF3A1Q15459 793 aaKnown RBP12.47□□□□□ -0.41
CPNE7-206ENST00000532500 VARS2Q5ST30 1063 aaKnown RBP12.47□□□□□ -0.41
CPNE7-206ENST00000532500 ZBTB41Q5SVQ8 909 aa12.47□□□□□ -0.41
CPNE7-206ENST00000532500 ALKAL1Q6UXT8 129 aa12.47□□□□□ -0.41
CPNE7-206ENST00000532500 SLC44A3Q8N4M1 653 aa12.47□□□□□ -0.41
CPNE7-206ENST00000532500 MYCT1Q8N699 235 aa12.47□□□□□ -0.41
CPNE7-206ENST00000532500 UROC1Q96N76 676 aa12.47□□□□□ -0.41
CPNE7-206ENST00000532500 MTRRQ9UBK8 725 aa12.47□□□□□ -0.41
CPNE7-206ENST00000532500 CLIC4Q9Y696 253 aa12.47□□□□□ -0.41
CPNE7-206ENST00000532500 NUMBLQ9Y6R0 609 aa12.47□□□□□ -0.41
CPNE7-206ENST00000532500 KRBA1A5PL33 1030 aa12.46□□□□□ -0.41
CPNE7-206ENST00000532500 TMEM189-UBE2V1I3L0A0 370 aa12.46□□□□□ -0.41
CPNE7-206ENST00000532500 CLDN3O15551 220 aa12.46□□□□□ -0.41
CPNE7-206ENST00000532500 GALR2O43603 387 aaPredicted RBP12.46□□□□□ -0.41
CPNE7-206ENST00000532500 TRAPPC3O43617 180 aa12.46□□□□□ -0.41
CPNE7-206ENST00000532500 NPR3P17342 541 aa12.46□□□□□ -0.41
CPNE7-206ENST00000532500 MARCKSP29966 332 aaPredicted RBP12.46□□□□□ -0.41
CPNE7-206ENST00000532500 NMT1P30419 496 aaKnown RBP12.46□□□□□ -0.41
CPNE7-206ENST00000532500 MCM4P33991 863 aa12.46□□□□□ -0.41
CPNE7-206ENST00000532500 MCM2P49736 904 aa12.46□□□□□ -0.41
CPNE7-206ENST00000532500 LIG4P49917 911 aa12.46□□□□□ -0.41
CPNE7-206ENST00000532500 ROR1Q01973 937 aa12.46□□□□□ -0.41
CPNE7-206ENST00000532500 HTR4Q13639 388 aa12.46□□□□□ -0.41
CPNE7-206ENST00000532500 SLC10A6Q3KNW5 377 aa12.46□□□□□ -0.41
CPNE7-206ENST00000532500 ARL6IP4Q66PJ3 421 aaKnown RBP12.46□□□□□ -0.41
CPNE7-206ENST00000532500 PARM1Q6UWI2 310 aa12.46□□□□□ -0.41
CPNE7-206ENST00000532500 USP49Q70CQ1 688 aa12.46□□□□□ -0.41
CPNE7-206ENST00000532500 HAUS6Q7Z4H7 955 aa12.46□□□□□ -0.41
CPNE7-206ENST00000532500 GPR152Q8TDT2 470 aa12.46□□□□□ -0.41
CPNE7-206ENST00000532500 SPIRE2Q8WWL2 714 aa12.46□□□□□ -0.41
CPNE7-206ENST00000532500 FGF14Q92915 247 aa12.46□□□□□ -0.41
CPNE7-206ENST00000532500 KIF12Q96FN5 646 aa12.46□□□□□ -0.41
CPNE7-206ENST00000532500 KXD1Q9BQD3 176 aa12.46□□□□□ -0.41
CPNE7-206ENST00000532500 TIPINQ9BVW5 301 aa12.46□□□□□ -0.41
CPNE7-206ENST00000532500 IKZF4Q9H2S9 585 aa12.46□□□□□ -0.41
CPNE7-206ENST00000532500 SLC38A7Q9NVC3 462 aa12.46□□□□□ -0.41
CPNE7-206ENST00000532500 CNTN3Q9P232 1028 aa12.46□□□□□ -0.41
CPNE7-206ENST00000532500 IGSF9Q9P2J2 1179 aa12.46□□□□□ -0.41
CPNE7-206ENST00000532500 EPS15L1Q9UBC2 864 aa12.46□□□□□ -0.41
CPNE7-206ENST00000532500 TIMM13Q9Y5L4 95 aaPredicted RBP12.46□□□□□ -0.41
CPNE7-206ENST00000532500 OBSL1O75147 1896 aa12.46□□□□□ -0.42
CPNE7-206ENST00000532500 RIF1Q5UIP0 2472 aaKnown RBP12.46□□□□□ -0.42
CPNE7-206ENST00000532500 WDR27A2RRH5 827 aa12.45□□□□□ -0.42
CPNE7-206ENST00000532500 TISP43B9A030 160 aa12.45□□□□□ -0.42
CPNE7-206ENST00000532500 PRRG1O14668 218 aa12.45□□□□□ -0.42
CPNE7-206ENST00000532500 HNRNPDLO14979 420 aaKnown RBP12.45□□□□□ -0.42
CPNE7-206ENST00000532500 XYLBO75191 536 aa12.45□□□□□ -0.42
CPNE7-206ENST00000532500 TOM1L1O75674 476 aa12.45□□□□□ -0.42
CPNE7-206ENST00000532500 KCNE1P15382 129 aa12.45□□□□□ -0.42
CPNE7-206ENST00000532500 NCKAP1LP55160 1127 aa12.45□□□□□ -0.42
CPNE7-206ENST00000532500 RAB33AQ14088 237 aa12.45□□□□□ -0.42
CPNE7-206ENST00000532500 PABPC1LQ4VXU2 614 aaKnown RBP12.45□□□□□ -0.42
CPNE7-206ENST00000532500 XKR4Q5GH76 650 aa12.45□□□□□ -0.42
CPNE7-206ENST00000532500 PDXDC1Q6P996 788 aa12.45□□□□□ -0.42
CPNE7-206ENST00000532500 CYP26C1Q6V0L0 522 aa12.45□□□□□ -0.42
CPNE7-206ENST00000532500 ANKS3Q6ZW76 656 aa12.45□□□□□ -0.42
CPNE7-206ENST00000532500 GPR65Q8IYL9 337 aa12.45□□□□□ -0.42
CPNE7-206ENST00000532500 RAD54LQ92698 747 aa12.45□□□□□ -0.42
CPNE7-206ENST00000532500 EPSTI1Q96J88 318 aa12.45□□□□□ -0.42
CPNE7-206ENST00000532500 CLIC6Q96NY7 704 aa12.45□□□□□ -0.42
CPNE7-206ENST00000532500 PRRX2Q99811 253 aa12.45□□□□□ -0.42
CPNE7-206ENST00000532500 C17orf75Q9HAS0 396 aa12.45□□□□□ -0.42
CPNE7-206ENST00000532500 BLOC1S4Q9NUP1 217 aa12.45□□□□□ -0.42
CPNE7-206ENST00000532500 LARSQ9P2J5 1176 aaKnown RBP12.45□□□□□ -0.42
CPNE7-206ENST00000532500 DNMT3BQ9UBC3 853 aaKnown RBP12.45□□□□□ -0.42
CPNE7-206ENST00000532500 FANCMQ8IYD8 2048 aa12.45□□□□□ -0.42
CPNE7-206ENST00000532500 ZNF292O60281 2723 aa12.45□□□□□ -0.42
CPNE7-206ENST00000532500 LACTBL1A8MY62 500 aa12.44□□□□□ -0.42
CPNE7-206ENST00000532500 PPEF2O14830 753 aa12.44□□□□□ -0.42
CPNE7-206ENST00000532500 TBCAO75347 108 aaKnown RBP12.44□□□□□ -0.42
CPNE7-206ENST00000532500 SEC24AO95486 1093 aa12.44□□□□□ -0.42
CPNE7-206ENST00000532500 HNRNPA1P09651 372 aaKnown RBP eCLIP12.44□□□□□ -0.42
CPNE7-206ENST00000532500 OR4Q2P0C623 313 aa12.44□□□□□ -0.42
CPNE7-206ENST00000532500 ELF1P32519 619 aa12.44□□□□□ -0.42
CPNE7-206ENST00000532500 SLC5A9Q2M3M2 681 aa12.44□□□□□ -0.42
CPNE7-206ENST00000532500 CTXN3Q4LDR2 81 aa12.44□□□□□ -0.42
CPNE7-206ENST00000532500 ZC2HC1CQ53FD0 456 aaPredicted RBP12.44□□□□□ -0.42
CPNE7-206ENST00000532500 DYMQ7RTS9 669 aa12.44□□□□□ -0.42
CPNE7-206ENST00000532500 BRAPQ7Z569 592 aa12.44□□□□□ -0.42
CPNE7-206ENST00000532500 FGF13Q92913 245 aa12.44□□□□□ -0.42
CPNE7-206ENST00000532500 MCRS1Q96EZ8 462 aa12.44□□□□□ -0.42
CPNE7-206ENST00000532500 AK8Q96MA6 479 aa12.44□□□□□ -0.42
CPNE7-206ENST00000532500 CORO1BQ9BR76 489 aa12.44□□□□□ -0.42
CPNE7-206ENST00000532500 NTPCRQ9BSD7 190 aaKnown RBP12.44□□□□□ -0.42
CPNE7-206ENST00000532500 MSTO1Q9BUK6 570 aa12.44□□□□□ -0.42
CPNE7-206ENST00000532500 FOXQ1Q9C009 403 aa12.44□□□□□ -0.42
CPNE7-206ENST00000532500 TBC1D17Q9HA65 648 aa12.44□□□□□ -0.42
CPNE7-206ENST00000532500 CYP4F11Q9HBI6 524 aa12.44□□□□□ -0.42
CPNE7-206ENST00000532500 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.44□□□□□ -0.42
CPNE7-206ENST00000532500 CDH7Q9ULB5 785 aa12.44□□□□□ -0.42
CPNE7-206ENST00000532500 TBX20Q9UMR3 447 aa12.44□□□□□ -0.42
CPNE7-206ENST00000532500 FAM186AA6NE01 2351 aa12.44□□□□□ -0.42
CPNE7-206ENST00000532500 NUP210Q8TEM1 1887 aaPredicted RBP12.44□□□□□ -0.42
CPNE7-206ENST00000532500 ATG2BQ96BY7 2078 aa12.44□□□□□ -0.42
CPNE7-206ENST00000532500 ANKRD63C9JTQ0 380 aa12.43□□□□□ -0.42
CPNE7-206ENST00000532500 GFRA3O60609 400 aa12.43□□□□□ -0.42
CPNE7-206ENST00000532500 LRG1P02750 347 aa12.43□□□□□ -0.42
CPNE7-206ENST00000532500 DCNP07585 359 aaKnown RBP12.43□□□□□ -0.42
CPNE7-206ENST00000532500 SRFP11831 508 aa12.43□□□□□ -0.42
CPNE7-206ENST00000532500 CPB1P15086 417 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms