RNA–Protein interactions for RNA: ENST00000532490.1

LDLRAD3-205, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-205ENST00000532490 MYADMQ96S97 322 aa17.25■□□□□ 0.35
LDLRAD3-205ENST00000532490 ST6GALNAC4Q9H4F1 302 aa17.25■□□□□ 0.35
LDLRAD3-205ENST00000532490 ZSCAN16Q9H4T2 348 aaPredicted RBP17.25■□□□□ 0.35
LDLRAD3-205ENST00000532490 KCNK12Q9HB15 430 aa17.25■□□□□ 0.35
LDLRAD3-205ENST00000532490 EPS15L1Q9UBC2 864 aa17.25■□□□□ 0.35
LDLRAD3-205ENST00000532490 STK17AQ9UEE5 414 aa17.25■□□□□ 0.35
LDLRAD3-205ENST00000532490 CDY1Q9Y6F8 540 aa17.25■□□□□ 0.35
LDLRAD3-205ENST00000532490 A0A0B4J269 797 aa17.24■□□□□ 0.35
LDLRAD3-205ENST00000532490 HNRNPDLO14979 420 aaKnown RBP17.24■□□□□ 0.35
LDLRAD3-205ENST00000532490 KRT18P05783 430 aaKnown RBP17.24■□□□□ 0.35
LDLRAD3-205ENST00000532490 C8AP07357 584 aa17.24■□□□□ 0.35
LDLRAD3-205ENST00000532490 HNRNPA1P09651 372 aaKnown RBP eCLIP17.24■□□□□ 0.35
LDLRAD3-205ENST00000532490 HOXA9P31269 272 aa17.24■□□□□ 0.35
LDLRAD3-205ENST00000532490 NASPP49321 788 aaPredicted RBP17.24■□□□□ 0.35
LDLRAD3-205ENST00000532490 LIG4P49917 911 aa17.24■□□□□ 0.35
LDLRAD3-205ENST00000532490 ZBTB41Q5SVQ8 909 aa17.24■□□□□ 0.35
LDLRAD3-205ENST00000532490 IER5LQ5T953 404 aa17.24■□□□□ 0.35
LDLRAD3-205ENST00000532490 MAP4K3Q8IVH8 894 aa17.24■□□□□ 0.35
LDLRAD3-205ENST00000532490 STAMQ92783 540 aa17.24■□□□□ 0.35
LDLRAD3-205ENST00000532490 BICD1Q96G01 975 aa17.24■□□□□ 0.35
LDLRAD3-205ENST00000532490 PIDD1Q9HB75 910 aa17.24■□□□□ 0.35
LDLRAD3-205ENST00000532490 CCDC39Q9UFE4 941 aa17.24■□□□□ 0.35
LDLRAD3-205ENST00000532490 TUBGCP4Q9UGJ1 667 aa17.24■□□□□ 0.35
LDLRAD3-205ENST00000532490 NOTCH4Q99466 2003 aa17.23■□□□□ 0.35
LDLRAD3-205ENST00000532490 MYMKA6NI61 221 aa17.23■□□□□ 0.35
LDLRAD3-205ENST00000532490 SYN3O14994 580 aa17.23■□□□□ 0.35
LDLRAD3-205ENST00000532490 OGTO15294 1046 aa17.23■□□□□ 0.35
LDLRAD3-205ENST00000532490 TBCAO75347 108 aaKnown RBP17.23■□□□□ 0.35
LDLRAD3-205ENST00000532490 POU2F2P09086 479 aa17.23■□□□□ 0.35
LDLRAD3-205ENST00000532490 LRPAP1P30533 357 aa17.23■□□□□ 0.35
LDLRAD3-205ENST00000532490 VCPP55072 806 aaKnown RBP17.23■□□□□ 0.35
LDLRAD3-205ENST00000532490 SPAG1Q07617 926 aa17.23■□□□□ 0.35
LDLRAD3-205ENST00000532490 TDGQ13569 410 aa17.23■□□□□ 0.35
LDLRAD3-205ENST00000532490 ENOX2Q16206 610 aaKnown RBP17.23■□□□□ 0.35
LDLRAD3-205ENST00000532490 KYAT1Q16773 422 aa17.23■□□□□ 0.35
LDLRAD3-205ENST00000532490 UVSSAQ2YD98 709 aa17.23■□□□□ 0.35
LDLRAD3-205ENST00000532490 ZC2HC1CQ53FD0 456 aaPredicted RBP17.23■□□□□ 0.35
LDLRAD3-205ENST00000532490 VARS2Q5ST30 1063 aaKnown RBP17.23■□□□□ 0.35
LDLRAD3-205ENST00000532490 AXDND1Q5T1B0 1012 aaPredicted RBP17.23■□□□□ 0.35
LDLRAD3-205ENST00000532490 SLC8B1Q6J4K2 584 aa17.23■□□□□ 0.35
LDLRAD3-205ENST00000532490 DNAJC19Q96DA6 116 aa17.23■□□□□ 0.35
LDLRAD3-205ENST00000532490 SUSD3Q96L08 255 aa17.23■□□□□ 0.35
LDLRAD3-205ENST00000532490 STRA6Q9BX79 667 aa17.23■□□□□ 0.35
LDLRAD3-205ENST00000532490 ZHX3Q9H4I2 956 aa17.23■□□□□ 0.35
LDLRAD3-205ENST00000532490 IGSF9Q9P2J2 1179 aa17.23■□□□□ 0.35
LDLRAD3-205ENST00000532490 A0A087X0B3 334 aa17.22■□□□□ 0.35
LDLRAD3-205ENST00000532490 LACTBL1A8MY62 500 aa17.22■□□□□ 0.35
LDLRAD3-205ENST00000532490 ANKRD63C9JTQ0 380 aa17.22■□□□□ 0.35
LDLRAD3-205ENST00000532490 PPP1R37O75864 691 aa17.22■□□□□ 0.35
LDLRAD3-205ENST00000532490 ABLIM3O94929 683 aa17.22■□□□□ 0.35
LDLRAD3-205ENST00000532490 CYP3A5P20815 502 aa17.22■□□□□ 0.35
LDLRAD3-205ENST00000532490 GBP2P32456 591 aaPredicted RBP17.22■□□□□ 0.35
LDLRAD3-205ENST00000532490 ABCD1P33897 745 aa17.22■□□□□ 0.35
LDLRAD3-205ENST00000532490 MATR3P43243 847 aaKnown RBP eCLIP17.22■□□□□ 0.35
LDLRAD3-205ENST00000532490 PPM1LQ5SGD2 360 aa17.22■□□□□ 0.35
LDLRAD3-205ENST00000532490 LIN9Q5TKA1 542 aa17.22■□□□□ 0.35
LDLRAD3-205ENST00000532490 RRAGBQ5VZM2 374 aa17.22■□□□□ 0.35
LDLRAD3-205ENST00000532490 RTL10Q7L3V2 364 aa17.22■□□□□ 0.35
LDLRAD3-205ENST00000532490 DYMQ7RTS9 669 aa17.22■□□□□ 0.35
LDLRAD3-205ENST00000532490 ZNF720Q7Z2F6 126 aa17.22■□□□□ 0.35
LDLRAD3-205ENST00000532490 SUGP1Q8IWZ8 645 aaKnown RBP17.22■□□□□ 0.35
LDLRAD3-205ENST00000532490 KRI1Q8N9T8 703 aaKnown RBP17.22■□□□□ 0.35
LDLRAD3-205ENST00000532490 LINC00301Q8NCQ3 95 aa17.22■□□□□ 0.35
LDLRAD3-205ENST00000532490 SLC7A14Q8TBB6 771 aa17.22■□□□□ 0.35
LDLRAD3-205ENST00000532490 DDX12PQ92771 950 aa17.22■□□□□ 0.35
LDLRAD3-205ENST00000532490 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.22■□□□□ 0.35
LDLRAD3-205ENST00000532490 CPSF3Q9UKF6 684 aaKnown RBP17.22■□□□□ 0.35
LDLRAD3-205ENST00000532490 STYXL1Q9Y6J8 313 aa17.22■□□□□ 0.35
LDLRAD3-205ENST00000532490 MYH15Q9Y2K3 1946 aa17.21■□□□□ 0.35
LDLRAD3-205ENST00000532490 TISP43B9A030 160 aa17.21■□□□□ 0.35
LDLRAD3-205ENST00000532490 CCL16O15467 120 aa17.21■□□□□ 0.35
LDLRAD3-205ENST00000532490 LAMP2P13473 410 aa17.21■□□□□ 0.35
LDLRAD3-205ENST00000532490 AVPR2P30518 371 aa17.21■□□□□ 0.35
LDLRAD3-205ENST00000532490 HOXD11P31277 338 aaPredicted RBP17.21■□□□□ 0.35
LDLRAD3-205ENST00000532490 NTHL1P78549 312 aa17.21■□□□□ 0.35
LDLRAD3-205ENST00000532490 ROR1Q01973 937 aa17.21■□□□□ 0.35
LDLRAD3-205ENST00000532490 SV2BQ7L1I2 683 aa17.21■□□□□ 0.35
LDLRAD3-205ENST00000532490 GRASPQ7Z6J2 395 aaPredicted RBP17.21■□□□□ 0.35
LDLRAD3-205ENST00000532490 SFR1Q86XK3 245 aa17.21■□□□□ 0.35
LDLRAD3-205ENST00000532490 PRSS33Q8NF86 280 aa17.21■□□□□ 0.35
LDLRAD3-205ENST00000532490 ZNF461Q8TAF7 563 aa17.21■□□□□ 0.35
LDLRAD3-205ENST00000532490 RSAD2Q8WXG1 361 aa17.21■□□□□ 0.35
LDLRAD3-205ENST00000532490 KIF12Q96FN5 646 aa17.21■□□□□ 0.35
LDLRAD3-205ENST00000532490 TSPAN18Q96SJ8 248 aa17.21■□□□□ 0.35
LDLRAD3-205ENST00000532490 MSTO1Q9BUK6 570 aa17.21■□□□□ 0.35
LDLRAD3-205ENST00000532490 UBQLN1Q9UMX0 589 aaKnown RBP17.21■□□□□ 0.35
LDLRAD3-205ENST00000532490 DUSP12Q9UNI6 340 aa17.21■□□□□ 0.35
LDLRAD3-205ENST00000532490 NUB1Q9Y5A7 615 aa17.21■□□□□ 0.35
LDLRAD3-205ENST00000532490 WDR27A2RRH5 827 aa17.2■□□□□ 0.34
LDLRAD3-205ENST00000532490 ANHXE9PGG2 379 aa17.2■□□□□ 0.34
LDLRAD3-205ENST00000532490 M0QZQ0 153 aa17.2■□□□□ 0.34
LDLRAD3-205ENST00000532490 FSHRP23945 695 aa17.2■□□□□ 0.34
LDLRAD3-205ENST00000532490 TXLNAP40222 546 aa17.2■□□□□ 0.34
LDLRAD3-205ENST00000532490 AARSP49588 968 aaKnown RBP eCLIP17.2■□□□□ 0.34
LDLRAD3-205ENST00000532490 NHLH1Q02575 133 aa17.2■□□□□ 0.34
LDLRAD3-205ENST00000532490 PPP2R3AQ06190 1150 aa17.2■□□□□ 0.34
LDLRAD3-205ENST00000532490 CCDC73Q6ZRK6 1079 aa17.2■□□□□ 0.34
LDLRAD3-205ENST00000532490 GET4Q7L5D6 327 aaPredicted RBP17.2■□□□□ 0.34
LDLRAD3-205ENST00000532490 PANK2Q9BZ23 570 aa17.2■□□□□ 0.34
LDLRAD3-205ENST00000532490 IKZF4Q9H2S9 585 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms