RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 TTLL3Q9Y4R7 772 aa11.96□□□□□ -0.5
PCDHGB4-201ENST00000519479 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.96□□□□□ -0.5
PCDHGB4-201ENST00000519479 BAZ2AQ9UIF9 1905 aaKnown RBP11.96□□□□□ -0.5
PCDHGB4-201ENST00000519479 SH3BP5LQ7L8J4 393 aa11.96□□□□□ -0.5
PCDHGB4-201ENST00000519479 NT5DC3Q86UY8 548 aa11.96□□□□□ -0.5
PCDHGB4-201ENST00000519479 ELMO3Q96BJ8 720 aa11.96□□□□□ -0.5
PCDHGB4-201ENST00000519479 SEPT10Q9P0V9 454 aa11.96□□□□□ -0.5
PCDHGB4-201ENST00000519479 VAV3Q9UKW4 847 aa11.96□□□□□ -0.5
PCDHGB4-201ENST00000519479 LTBP3Q9NS15 1303 aa11.96□□□□□ -0.5
PCDHGB4-201ENST00000519479 SNED1Q8TER0 1413 aa11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 COILP38432 576 aaPredicted RBP11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 AARSP49588 968 aaKnown RBP eCLIP11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 NME8Q8N427 588 aa11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 TSEN2Q8NCE0 465 aaKnown RBP11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 RNF169Q8NCN4 708 aa11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 RPS6KC1Q96S38 1066 aa11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 WDR91A4D1P6 747 aa11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 TGFB1I1O43294 461 aa11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 OATP04181 439 aa11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 TTLL4Q14679 1199 aa11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 ZCWPW2Q504Y3 356 aa11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 AGBL2Q5U5Z8 902 aa11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 HGSNATQ68CP4 663 aa11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 FAM47EQ6ZV65 393 aa11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 IRF2BP2Q7Z5L9 587 aa11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 TACO1Q9BSH4 297 aaKnown RBP11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 OSBPL8Q9BZF1 889 aa11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 PRDM4Q9UKN5 801 aa11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 NOD1Q9Y239 953 aa11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 MEFVO15553 781 aaPredicted RBP11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 MT-ND3P03897 115 aa11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 ITGB5P18084 799 aa11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 CA8P35219 290 aa11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 MARSP56192 900 aaKnown RBP11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 LONRF1Q17RB8 773 aa11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 TTC13Q8NBP0 860 aa11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 FBXO25Q8TCJ0 367 aa11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 ATP2A3Q93084 1043 aa11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 TBC1D31Q96DN5 1066 aa11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 THOC1Q96FV9 657 aaKnown RBP11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 RILPQ96NA2 401 aa11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 PARK7Q99497 189 aaKnown RBP11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 NHSQ6T4R5 1651 aa11.95□□□□□ -0.5
PCDHGB4-201ENST00000519479 PHF20L1A8MW92 1017 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 M0QYV0 167 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 NOL4O94818 638 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 MAPTP10636 758 aaKnown RBP11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 ITIH2P19823 946 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 ARSEP51690 589 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 DLG4P78352 724 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 PPP6R3Q5H9R7 873 aaPredicted RBP11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 LRRC71Q8N4P6 559 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 ARHGEF26Q96DR7 871 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 C9orf72Q96LT7 481 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 SENP7Q9BQF6 1050 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 TRAIPQ9BWF2 469 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 AGTP01019 485 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 KRT7P08729 469 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 TXNP10599 105 aaKnown RBP11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 CHN1P15882 459 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 ARL4CP56559 192 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 PPP3CAQ08209 521 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 KDM7AQ6ZMT4 941 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 EPM2AIP1Q7L775 607 aaPredicted RBP11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 NIPA1Q7RTP0 329 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 TMC2Q8TDI7 906 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 ATP8B4Q8TF62 1192 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 MMP19Q99542 508 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 PITPNM3Q9BZ71 974 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 VWA5AO00534 786 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 CYP24A1Q07973 514 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 FAM47CQ5HY64 1035 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 CATSPER4Q7RTX7 472 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 SAMD3Q8N6K7 520 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 OR6B3Q8NGW1 331 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 IL31RAQ8NI17 732 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 MICAL1Q8TDZ2 1067 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 TATDN2Q93075 761 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 MCEEQ96PE7 176 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 PABPC3Q9H361 631 aaKnown RBP11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 SNX25Q9H3E2 840 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 ZBED1O96006 694 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 WEE2P0C1S8 567 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 KRT3P12035 628 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 GARTP22102 1010 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 HOXD10P28358 340 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 RFC5P40937 340 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 MXD4Q14582 209 aaPredicted RBP11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 PTGISQ16647 500 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 KYNUQ16719 465 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 Q3C1V9 767 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 TRMT10CQ7L0Y3 403 aaKnown RBP11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 ZNF677Q86XU0 584 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 ZBED8Q8IZ13 594 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 KAT5Q92993 513 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 GDF3Q9NR23 364 aa11.94□□□□□ -0.5
PCDHGB4-201ENST00000519479 CES2O00748 559 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 XPOTO43592 962 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms