RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 SLFN12LQ6IEE8 588 aa5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 KLHDC10Q6PID8 442 aa5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 PAQR3Q6TCH7 311 aa5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 CILP2Q8IUL8 1156 aa5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 SIRT2Q8IXJ6 389 aa5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 PRR18Q8N4B5 295 aa5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 ERCC4Q92889 916 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 COA7Q96BR5 231 aa5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 ACO2Q99798 780 aaKnown RBP5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 MYL10Q9BUA6 226 aa5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 KRTAP4-6Q9BYQ5 205 aa5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 ARHGAP39Q9C0H5 1083 aa5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 NUP62CLQ9H1M0 184 aa5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 KCTD10Q9H3F6 313 aa5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 MS4A5Q9H3V2 200 aa5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 POFUT1Q9H488 388 aa5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 TPSG1Q9NRR2 321 aa5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 DDX20Q9UHI6 824 aaKnown RBP5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 DBR1Q9UK59 544 aaKnown RBP5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 INTUQ9ULD6 942 aa5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 PALD1Q9ULE6 856 aa5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 SYNPO2Q9UMS6 1093 aa5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 EDARQ9UNE0 448 aa5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 COL2A1P02458 1487 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 ZFHX4Q86UP3 3567 aa5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 PRSS38A1L453 326 aa5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 FOXN3O00409 490 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 SLC16A6O15403 523 aa5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 SH3BP5O60239 455 aa5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 MGEA5O60502 916 aa5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 WDHD1O75717 1129 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 TCEA3O75764 348 aa5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 TUSC2O75896 110 aa5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 APOL3O95236 402 aa5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 HSP90AB1P08238 724 aaKnown RBP5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 MMEP08473 750 aa5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 TMEM253P0C7T8 217 aa5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 CYP19A1P11511 503 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 EIF5P55010 431 aaKnown RBP5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 PRMT2P55345 433 aa5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 NRG3P56975 720 aa5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 SLC6A3Q01959 620 aa5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 DBPQ10586 325 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 MALLQ13021 153 aa5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 ZNF267Q14586 743 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 RALBP1Q15311 655 aa5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 AAK1Q2M2I8 961 aa5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 MIGA2Q7L4E1 593 aa5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 KANSL1Q7Z3B3 1105 aa5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 RTN4RL1Q86UN2 441 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 MYLK4Q86YV6 388 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 CDYL2Q8N8U2 506 aa5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 ZBTB34Q8NCN2 500 aa5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 SUPT20HQ8NEM7 779 aa5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 HDAC10Q969S8 669 aa5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 FOXRED1Q96CU9 486 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 DEFB118Q96PH6 123 aa5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 DNM3Q9UQ16 869 aa5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 DAAM1Q9Y4D1 1078 aa5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 CFAP20Q9Y6A4 193 aaKnown RBP5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 A0A1W2PP64 1363 aa5.67□□□□□ -1.5
HMGB1P23-201ENST00000518743 FAM186AA6NE01 2351 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 SNED1Q8TER0 1413 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 CAPN8A6NHC0 703 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 PRR19A6NJB7 356 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 FAM171A2A8MVW0 826 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 PSMD14O00487 310 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 SGSM2O43147 1006 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 PFKMP08237 780 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 CLEC2LP0C7M8 214 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 SETSIPP0DME0 302 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 PTGS1P23219 599 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 LGALS4P56470 323 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 GPSM2P81274 684 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 POU5F1BQ06416 359 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 KIAA0753Q2KHM9 967 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 ANO6Q4KMQ2 910 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 PRR16Q569H4 304 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 MUM1L1Q5H9M0 696 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 SLC23A3Q6PIS1 610 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 APBB1IPQ7Z5R6 666 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 DPP9Q86TI2 863 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 CLEC4DQ8WXI8 215 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 DPF2Q92785 391 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 PGBD4Q96DM1 585 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 DDX11Q96FC9 970 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 TOE1Q96GM8 510 aaKnown RBP5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 HIST1H2AHQ96KK5 128 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 MPHOSPH9Q99550 1183 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 HIST1H2AJQ99878 128 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 HERPUD2Q9BSE4 406 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 ADI1Q9BV57 179 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 KCNH6Q9H252 994 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 DTLQ9NZJ0 730 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 DPP7Q9UHL4 492 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 PRSS50Q9UI38 385 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 DENND2AQ9ULE3 1009 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 ANGEL1Q9UNK9 670 aaKnown RBP5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 WASF3Q9UPY6 502 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 TELO2Q9Y4R8 837 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms