RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 OTOP3Q7RTS5 596 aa25.11■■□□□ 1.61
CLDND1-230ENST00000514537 FOXD4L4Q8WXT5 416 aaPredicted RBP25.11■■□□□ 1.61
CLDND1-230ENST00000514537 SMG7Q92540 1137 aaKnown RBP25.11■■□□□ 1.61
CLDND1-230ENST00000514537 ACSF2Q96CM8 615 aaPredicted RBP25.11■■□□□ 1.61
CLDND1-230ENST00000514537 MSTO1Q9BUK6 570 aa25.11■■□□□ 1.61
CLDND1-230ENST00000514537 STRA6Q9BX79 667 aa25.11■■□□□ 1.61
CLDND1-230ENST00000514537 PRKD2Q9BZL6 878 aa25.11■■□□□ 1.61
CLDND1-230ENST00000514537 SEL1LQ9UBV2 794 aa25.11■■□□□ 1.61
CLDND1-230ENST00000514537 LIMD1Q9UGP4 676 aa25.11■■□□□ 1.61
CLDND1-230ENST00000514537 TMEM221A6NGB7 291 aa25.1■■□□□ 1.61
CLDND1-230ENST00000514537 LACTBL1A8MY62 500 aa25.1■■□□□ 1.61
CLDND1-230ENST00000514537 ANKRD63C9JTQ0 380 aa25.1■■□□□ 1.61
CLDND1-230ENST00000514537 M0R296 226 aa25.1■■□□□ 1.61
CLDND1-230ENST00000514537 PPP1R37O75864 691 aa25.1■■□□□ 1.61
CLDND1-230ENST00000514537 GAP43P17677 238 aa25.1■■□□□ 1.61
CLDND1-230ENST00000514537 OR1D2P34982 312 aa25.1■■□□□ 1.61
CLDND1-230ENST00000514537 SIGLEC14Q08ET2 396 aa25.1■■□□□ 1.61
CLDND1-230ENST00000514537 ENOX2Q16206 610 aaKnown RBP25.1■■□□□ 1.61
CLDND1-230ENST00000514537 RSPO2Q6UXX9 243 aaPredicted RBP25.1■■□□□ 1.61
CLDND1-230ENST00000514537 BMP8AQ7Z5Y6 402 aa25.1■■□□□ 1.61
CLDND1-230ENST00000514537 RPF1Q9H9Y2 349 aaKnown RBP25.1■■□□□ 1.61
CLDND1-230ENST00000514537 TUBGCP4Q9UGJ1 667 aa25.1■■□□□ 1.61
CLDND1-230ENST00000514537 HCN4Q9Y3Q4 1203 aa25.1■■□□□ 1.61
CLDND1-230ENST00000514537 NUB1Q9Y5A7 615 aa25.1■■□□□ 1.61
CLDND1-230ENST00000514537 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.1■■□□□ 1.61
CLDND1-230ENST00000514537 STYXL1Q9Y6J8 313 aa25.1■■□□□ 1.61
CLDND1-230ENST00000514537 PLXNA3P51805 1871 aa25.1■■□□□ 1.61
CLDND1-230ENST00000514537 SYN3O14994 580 aa25.09■■□□□ 1.61
CLDND1-230ENST00000514537 F13A1P00488 732 aa25.09■■□□□ 1.61
CLDND1-230ENST00000514537 PPP2R3AQ06190 1150 aa25.09■■□□□ 1.61
CLDND1-230ENST00000514537 SPAG1Q07617 926 aa25.09■■□□□ 1.61
CLDND1-230ENST00000514537 PDILTQ8N807 584 aa25.09■■□□□ 1.61
CLDND1-230ENST00000514537 HVCN1Q96D96 273 aa25.09■■□□□ 1.61
CLDND1-230ENST00000514537 KIF12Q96FN5 646 aa25.09■■□□□ 1.61
CLDND1-230ENST00000514537 TSPAN18Q96SJ8 248 aa25.09■■□□□ 1.61
CLDND1-230ENST00000514537 CPSF3Q9UKF6 684 aaKnown RBP25.09■■□□□ 1.61
CLDND1-230ENST00000514537 FRMD3A2A2Y4 597 aa25.08■■□□□ 1.61
CLDND1-230ENST00000514537 CYP3A5P20815 502 aa25.08■■□□□ 1.61
CLDND1-230ENST00000514537 LRPAP1P30533 357 aa25.08■■□□□ 1.61
CLDND1-230ENST00000514537 SLFN12LQ6IEE8 588 aa25.08■■□□□ 1.61
CLDND1-230ENST00000514537 CD302Q8IX05 232 aa25.08■■□□□ 1.61
CLDND1-230ENST00000514537 SUSD3Q96L08 255 aa25.08■■□□□ 1.61
CLDND1-230ENST00000514537 MRPL44Q9H9J2 332 aaKnown RBP25.08■■□□□ 1.61
CLDND1-230ENST00000514537 PIDD1Q9HB75 910 aa25.08■■□□□ 1.61
CLDND1-230ENST00000514537 UBQLN1Q9UMX0 589 aaKnown RBP25.08■■□□□ 1.61
CLDND1-230ENST00000514537 SORCS3Q9UPU3 1222 aa25.08■■□□□ 1.61
CLDND1-230ENST00000514537 ARIH1Q9Y4X5 557 aaPredicted RBP25.08■■□□□ 1.61
CLDND1-230ENST00000514537 CDY1Q9Y6F8 540 aa25.08■■□□□ 1.61
CLDND1-230ENST00000514537 CLUHO75153 1309 aa25.08■■□□□ 1.6
CLDND1-230ENST00000514537 VWA8A3KMH1 1905 aa25.08■■□□□ 1.6
CLDND1-230ENST00000514537 CITO14578 2027 aa25.07■■□□□ 1.6
CLDND1-230ENST00000514537 TISP43B9A030 160 aa25.07■■□□□ 1.6
CLDND1-230ENST00000514537 TBC1D4O60343 1298 aa25.07■■□□□ 1.6
CLDND1-230ENST00000514537 CUTAO60888 179 aa25.07■■□□□ 1.6
CLDND1-230ENST00000514537 ASGR2P07307 311 aa25.07■■□□□ 1.6
CLDND1-230ENST00000514537 PKP1Q13835 747 aa25.07■■□□□ 1.6
CLDND1-230ENST00000514537 MRPL58Q14197 206 aaKnown RBP25.07■■□□□ 1.6
CLDND1-230ENST00000514537 VARS2Q5ST30 1063 aaKnown RBP25.07■■□□□ 1.6
CLDND1-230ENST00000514537 LIN9Q5TKA1 542 aa25.07■■□□□ 1.6
CLDND1-230ENST00000514537 TMEM130Q8N3G9 435 aa25.07■■□□□ 1.6
CLDND1-230ENST00000514537 SPRYD3Q8NCJ5 442 aa25.07■■□□□ 1.6
CLDND1-230ENST00000514537 STAMQ92783 540 aa25.07■■□□□ 1.6
CLDND1-230ENST00000514537 ASIC4Q96FT7 647 aa25.07■■□□□ 1.6
CLDND1-230ENST00000514537 MFSD14AQ96MC6 490 aa25.07■■□□□ 1.6
CLDND1-230ENST00000514537 OLFML3Q9NRN5 406 aa25.07■■□□□ 1.6
CLDND1-230ENST00000514537 N4BP1O75113 896 aaKnown RBP25.06■■□□□ 1.6
CLDND1-230ENST00000514537 C8AP07357 584 aa25.06■■□□□ 1.6
CLDND1-230ENST00000514537 HNRNPA1P09651 372 aaKnown RBP eCLIP25.06■■□□□ 1.6
CLDND1-230ENST00000514537 IDEP14735 1019 aa25.06■■□□□ 1.6
CLDND1-230ENST00000514537 HOXA9P31269 272 aa25.06■■□□□ 1.6
CLDND1-230ENST00000514537 MCM4P33991 863 aa25.06■■□□□ 1.6
CLDND1-230ENST00000514537 MTMR3Q13615 1198 aa25.06■■□□□ 1.6
CLDND1-230ENST00000514537 E2F4Q16254 413 aa25.06■■□□□ 1.6
CLDND1-230ENST00000514537 UVSSAQ2YD98 709 aa25.06■■□□□ 1.6
CLDND1-230ENST00000514537 FOXD4L6Q3SYB3 417 aaPredicted RBP25.06■■□□□ 1.6
CLDND1-230ENST00000514537 AXDND1Q5T1B0 1012 aaPredicted RBP25.06■■□□□ 1.6
CLDND1-230ENST00000514537 ADALQ6DHV7 355 aa25.06■■□□□ 1.6
CLDND1-230ENST00000514537 SLC8B1Q6J4K2 584 aa25.06■■□□□ 1.6
CLDND1-230ENST00000514537 SHC4Q6S5L8 630 aa25.06■■□□□ 1.6
CLDND1-230ENST00000514537 FOXD4L3Q6VB84 417 aaPredicted RBP25.06■■□□□ 1.6
CLDND1-230ENST00000514537 UBALD2Q8IYN6 164 aa25.06■■□□□ 1.6
CLDND1-230ENST00000514537 IKZF4Q9H2S9 585 aa25.06■■□□□ 1.6
CLDND1-230ENST00000514537 TBC1D7Q9P0N9 293 aa25.06■■□□□ 1.6
CLDND1-230ENST00000514537 XPOTO43592 962 aaKnown RBP25.05■■□□□ 1.6
CLDND1-230ENST00000514537 ADSSP30520 456 aa25.05■■□□□ 1.6
CLDND1-230ENST00000514537 KCNA1Q09470 495 aa25.05■■□□□ 1.6
CLDND1-230ENST00000514537 PPM1LQ5SGD2 360 aa25.05■■□□□ 1.6
CLDND1-230ENST00000514537 L1TD1Q5T7N2 865 aaKnown RBP25.05■■□□□ 1.6
CLDND1-230ENST00000514537 ATL3Q6DD88 541 aa25.05■■□□□ 1.6
CLDND1-230ENST00000514537 RTL10Q7L3V2 364 aa25.05■■□□□ 1.6
CLDND1-230ENST00000514537 PBXIP1Q96AQ6 731 aa25.05■■□□□ 1.6
CLDND1-230ENST00000514537 PANK4Q9NVE7 773 aa25.05■■□□□ 1.6
CLDND1-230ENST00000514537 KBTBD4Q9NVX7 518 aa25.05■■□□□ 1.6
CLDND1-230ENST00000514537 AGO2Q9UKV8 859 aaKnown RBP25.05■■□□□ 1.6
CLDND1-230ENST00000514537 EXOC7Q9UPT5 735 aa25.05■■□□□ 1.6
CLDND1-230ENST00000514537 MTCL1Q9Y4B5 1905 aaKnown RBP25.05■■□□□ 1.6
CLDND1-230ENST00000514537 H7C4K7 107 aa25.04■■□□□ 1.6
CLDND1-230ENST00000514537 ACOT2P49753 483 aa25.04■■□□□ 1.6
CLDND1-230ENST00000514537 POU5F1Q01860 360 aaKnown RBP25.04■■□□□ 1.6
CLDND1-230ENST00000514537 POSTNQ15063 836 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms