RNA–Protein interactions for RNA: ENST00000506563.5

CDK7-204, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-204ENST00000506563 DNAJB4Q9UDY4 337 aa13.78□□□□□ -0.2
CDK7-204ENST00000506563 UBQLN1Q9UMX0 589 aaKnown RBP13.78□□□□□ -0.2
CDK7-204ENST00000506563 C2CD2Q9Y426 696 aa13.78□□□□□ -0.2
CDK7-204ENST00000506563 LCHNA4D1U4 455 aa13.77□□□□□ -0.21
CDK7-204ENST00000506563 STX10O60499 249 aa13.77□□□□□ -0.21
CDK7-204ENST00000506563 B4GALT3O60512 393 aa13.77□□□□□ -0.21
CDK7-204ENST00000506563 DDHD2O94830 711 aa13.77□□□□□ -0.21
CDK7-204ENST00000506563 ITGB3P05106 788 aa13.77□□□□□ -0.21
CDK7-204ENST00000506563 PIK3CAP42336 1068 aa13.77□□□□□ -0.21
CDK7-204ENST00000506563 MXI1P50539 228 aa13.77□□□□□ -0.21
CDK7-204ENST00000506563 COPB1P53618 953 aaKnown RBP13.77□□□□□ -0.21
CDK7-204ENST00000506563 MYL7Q01449 175 aa13.77□□□□□ -0.21
CDK7-204ENST00000506563 KCNH2Q12809 1159 aa13.77□□□□□ -0.21
CDK7-204ENST00000506563 TUSC3Q13454 348 aa13.77□□□□□ -0.21
CDK7-204ENST00000506563 COL4A6Q14031 1691 aa13.77□□□□□ -0.21
CDK7-204ENST00000506563 VWA3BQ502W6 1294 aa13.77□□□□□ -0.21
CDK7-204ENST00000506563 TDRD10Q5VZ19 366 aaKnown RBP13.77□□□□□ -0.21
CDK7-204ENST00000506563 SCARA3Q6AZY7 606 aa13.77□□□□□ -0.21
CDK7-204ENST00000506563 TDHQ8IZJ6 230 aa13.77□□□□□ -0.21
CDK7-204ENST00000506563 HASPINQ8TF76 798 aa13.77□□□□□ -0.21
CDK7-204ENST00000506563 ELMO3Q96BJ8 720 aa13.77□□□□□ -0.21
CDK7-204ENST00000506563 ZNF689Q96CS4 500 aaPredicted RBP13.77□□□□□ -0.21
CDK7-204ENST00000506563 RAD9AQ99638 391 aa13.77□□□□□ -0.21
CDK7-204ENST00000506563 NRDE2Q9H7Z3 1164 aa13.77□□□□□ -0.21
CDK7-204ENST00000506563 LIMA1Q9UHB6 759 aaKnown RBP13.77□□□□□ -0.21
CDK7-204ENST00000506563 PRG3Q9Y2Y8 225 aaPredicted RBP13.77□□□□□ -0.21
CDK7-204ENST00000506563 DERAQ9Y315 318 aa13.77□□□□□ -0.21
CDK7-204ENST00000506563 R3HCC1Q9Y3T6 440 aaKnown RBP13.77□□□□□ -0.21
CDK7-204ENST00000506563 INSL6Q9Y581 213 aa13.77□□□□□ -0.21
CDK7-204ENST00000506563 MRPL42Q9Y6G3 142 aaKnown RBP13.77□□□□□ -0.21
CDK7-204ENST00000506563 PPEF2O14830 753 aa13.76□□□□□ -0.21
CDK7-204ENST00000506563 INPPL1O15357 1258 aa13.76□□□□□ -0.21
CDK7-204ENST00000506563 POLR2BP30876 1174 aaKnown RBP13.76□□□□□ -0.21
CDK7-204ENST00000506563 BMP8BP34820 402 aa13.76□□□□□ -0.21
CDK7-204ENST00000506563 FMO5P49326 533 aa13.76□□□□□ -0.21
CDK7-204ENST00000506563 CLCNKBP51801 687 aa13.76□□□□□ -0.21
CDK7-204ENST00000506563 HTRA4P83105 476 aaPredicted RBP13.76□□□□□ -0.21
CDK7-204ENST00000506563 FANCCQ00597 558 aa13.76□□□□□ -0.21
CDK7-204ENST00000506563 TRPC3Q13507 836 aa13.76□□□□□ -0.21
CDK7-204ENST00000506563 NAB2Q15742 525 aa13.76□□□□□ -0.21
CDK7-204ENST00000506563 CBWD6Q4V339 395 aa13.76□□□□□ -0.21
CDK7-204ENST00000506563 CBWD3Q5JTY5 395 aa13.76□□□□□ -0.21
CDK7-204ENST00000506563 CBWD5Q5RIA9 395 aa13.76□□□□□ -0.21
CDK7-204ENST00000506563 SV2AQ7L0J3 742 aa13.76□□□□□ -0.21
CDK7-204ENST00000506563 TRAPPC11Q7Z392 1133 aa13.76□□□□□ -0.21
CDK7-204ENST00000506563 NT5DC4Q86YG4 428 aa13.76□□□□□ -0.21
CDK7-204ENST00000506563 CMTR2Q8IYT2 770 aaKnown RBP13.76□□□□□ -0.21
CDK7-204ENST00000506563 FIBCD1Q8N539 461 aa13.76□□□□□ -0.21
CDK7-204ENST00000506563 C1orf127Q8N9H9 656 aa13.76□□□□□ -0.21
CDK7-204ENST00000506563 PAAF1Q9BRP4 392 aa13.76□□□□□ -0.21
CDK7-204ENST00000506563 NDST4Q9H3R1 872 aa13.76□□□□□ -0.21
CDK7-204ENST00000506563 RC3H2Q9HBD1 1191 aaKnown RBP13.76□□□□□ -0.21
CDK7-204ENST00000506563 TMEM8AQ9HCN3 771 aa13.76□□□□□ -0.21
CDK7-204ENST00000506563 AGAP1Q9UPQ3 857 aa13.76□□□□□ -0.21
CDK7-204ENST00000506563 GBF1Q92538 1859 aa13.76□□□□□ -0.21
CDK7-204ENST00000506563 NT5C1B-RDH14C9J2C7 533 aa13.75□□□□□ -0.21
CDK7-204ENST00000506563 PODXLO00592 558 aa13.75□□□□□ -0.21
CDK7-204ENST00000506563 HLA-DRAP01903 254 aa13.75□□□□□ -0.21
CDK7-204ENST00000506563 C4BPAP04003 597 aaKnown RBP13.75□□□□□ -0.21
CDK7-204ENST00000506563 PBX2P40425 430 aa13.75□□□□□ -0.21
CDK7-204ENST00000506563 SLC11A1P49279 550 aa13.75□□□□□ -0.21
CDK7-204ENST00000506563 AP3M2P53677 418 aa13.75□□□□□ -0.21
CDK7-204ENST00000506563 CLDN10P78369 228 aa13.75□□□□□ -0.21
CDK7-204ENST00000506563 ZBTB6Q15916 424 aa13.75□□□□□ -0.21
CDK7-204ENST00000506563 PTPN21Q16825 1174 aa13.75□□□□□ -0.21
CDK7-204ENST00000506563 FILIP1LQ4L180 1135 aa13.75□□□□□ -0.21
CDK7-204ENST00000506563 MIIPQ5JXC2 388 aa13.75□□□□□ -0.21
CDK7-204ENST00000506563 KRT39Q6A163 491 aa13.75□□□□□ -0.21
CDK7-204ENST00000506563 COLGALT2Q8IYK4 626 aa13.75□□□□□ -0.21
CDK7-204ENST00000506563 TAS1R2Q8TE23 839 aa13.75□□□□□ -0.21
CDK7-204ENST00000506563 TSPAN18Q96SJ8 248 aa13.75□□□□□ -0.21
CDK7-204ENST00000506563 CRACR2AQ9BSW2 395 aa13.75□□□□□ -0.21
CDK7-204ENST00000506563 PI4K2AQ9BTU6 479 aa13.75□□□□□ -0.21
CDK7-204ENST00000506563 CWH43Q9H720 699 aa13.75□□□□□ -0.21
CDK7-204ENST00000506563 IFNKQ9P0W0 207 aa13.75□□□□□ -0.21
CDK7-204ENST00000506563 SIX4Q9UIU6 781 aa13.75□□□□□ -0.21
CDK7-204ENST00000506563 ITGA11Q9UKX5 1188 aa13.75□□□□□ -0.21
CDK7-204ENST00000506563 MTUS1Q9ULD2 1270 aa13.75□□□□□ -0.21
CDK7-204ENST00000506563 KIAA1671Q9BY89 1806 aa13.74□□□□□ -0.21
CDK7-204ENST00000506563 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.74□□□□□ -0.21
CDK7-204ENST00000506563 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.74□□□□□ -0.21
CDK7-204ENST00000506563 F8W810 466 aa13.74□□□□□ -0.21
CDK7-204ENST00000506563 N4BP1O75113 896 aaKnown RBP13.74□□□□□ -0.21
CDK7-204ENST00000506563 VNN1O95497 513 aa13.74□□□□□ -0.21
CDK7-204ENST00000506563 CST3P01034 146 aaPredicted RBP13.74□□□□□ -0.21
CDK7-204ENST00000506563 CA3P07451 260 aa13.74□□□□□ -0.21
CDK7-204ENST00000506563 CYP3A5P20815 502 aa13.74□□□□□ -0.21
CDK7-204ENST00000506563 IGFBP6P24592 240 aaPredicted RBP13.74□□□□□ -0.21
CDK7-204ENST00000506563 GTF2H1P32780 548 aa13.74□□□□□ -0.21
CDK7-204ENST00000506563 BCAR1P56945 870 aa13.74□□□□□ -0.21
CDK7-204ENST00000506563 UBASH3AP57075 661 aa13.74□□□□□ -0.21
CDK7-204ENST00000506563 MYL6P60660 151 aa13.74□□□□□ -0.21
CDK7-204ENST00000506563 RBP5P82980 135 aa13.74□□□□□ -0.21
CDK7-204ENST00000506563 UBXN1Q04323 297 aa13.74□□□□□ -0.21
CDK7-204ENST00000506563 LRMPQ12912 555 aa13.74□□□□□ -0.21
CDK7-204ENST00000506563 NCOA4Q13772 614 aa13.74□□□□□ -0.21
CDK7-204ENST00000506563 ZACNQ401N2 412 aa13.74□□□□□ -0.21
CDK7-204ENST00000506563 FKBP15Q5T1M5 1219 aa13.74□□□□□ -0.21
CDK7-204ENST00000506563 C9orf57Q5W0N0 161 aa13.74□□□□□ -0.21
CDK7-204ENST00000506563 PCMTD1Q96MG8 357 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms