RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 H7C0S8 307 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 MYO1CO00159 1063 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 HGSO14964 777 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 PRAMEF4O60810 478 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 URI1O94763 535 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 ALX3O95076 343 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 PRLP01236 227 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 FAM200BP0CF97 657 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 HSPA1AP0DMV8 641 aaKnown RBP4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 HSPA1BP0DMV9 641 aaKnown RBP4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 TACR1P25103 407 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 HOXC13P31276 330 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 PAFAH1B1P43034 410 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 PREPP48147 710 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 ZNF131P52739 623 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 ARFIP2P53365 341 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 SOX8P57073 446 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 SESN2P58004 480 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 ACTR2P61160 394 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 HTRA4P83105 476 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 EXOSC9Q06265 439 aaKnown RBP4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 MGAT2Q10469 447 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 CHAF1BQ13112 559 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 RPS6KA2Q15349 733 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 SGO2Q562F6 1265 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 SLC9C2Q5TAH2 1124 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 KIAA1614Q5VZ46 1190 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 ZNF449Q6P9G9 518 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 SLC22A25Q6T423 547 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 CASC1Q6TDU7 716 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 CATSPERGQ6ZRH7 1159 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 USP49Q70CQ1 688 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 GAREM2Q75VX8 874 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 TSPYL5Q86VY4 417 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 CREG2Q8IUH2 290 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 TRIM48Q8IWZ4 208 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 TMEM57Q8N5G2 664 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 GALNT6Q8NCL4 622 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 GPR156Q8NFN8 814 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 STT3BQ8TCJ2 826 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 CALML6Q8TD86 181 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 ADAMTS15Q8TE58 950 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 EDARADDQ8WWZ3 215 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 C3orf49Q96BT1 292 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 NMD3Q96D46 503 aaKnown RBP4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 RNF125Q96EQ8 232 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 HIST1H2AHQ96KK5 128 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 SAMD11Q96NU1 681 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 PSMG3-AS1Q96PY0 264 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 TRAPPC9Q96Q05 1148 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 HIST1H2AJQ99878 128 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 DBNDD2Q9BQY9 259 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 TXLNGYQ9BZA5 131 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 FTOQ9C0B1 505 aaKnown RBP eCLIP4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 DUSP15Q9H1R2 295 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 KCNF1Q9H3M0 494 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 SYNCQ9H7C4 482 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 CHODLQ9H9P2 273 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 MKNK2Q9HBH9 465 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 SENP2Q9HC62 589 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 RGL1Q9NZL6 768 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 FTSJ1Q9UET6 329 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 ZNF215Q9UL58 517 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 TMCC3Q9ULS5 477 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 TMEM5Q9Y2B1 443 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 ASB1Q9Y576 335 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 CAPN6Q9Y6Q1 641 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 X6R8D5 127 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 FAM95CA0A1B0GW59 222 aa4.06□□□□□ -1.76
HMGB1P22-201ENST00000505315 GTPBP1O00178 669 aaKnown RBP4.06□□□□□ -1.76
HMGB1P22-201ENST00000505315 MASP2O00187 686 aa4.06□□□□□ -1.76
HMGB1P22-201ENST00000505315 ST8SIA5O15466 376 aa4.06□□□□□ -1.76
HMGB1P22-201ENST00000505315 SGTAO43765 313 aa4.06□□□□□ -1.76
HMGB1P22-201ENST00000505315 PPP1R11O60927 126 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P22-201ENST00000505315 DGAT1O75907 488 aa4.06□□□□□ -1.76
HMGB1P22-201ENST00000505315 TSPAN9O75954 239 aa4.06□□□□□ -1.76
HMGB1P22-201ENST00000505315 ENDOD1O94919 500 aa4.06□□□□□ -1.76
HMGB1P22-201ENST00000505315 BAG2O95816 211 aa4.06□□□□□ -1.76
HMGB1P22-201ENST00000505315 NTRK1P04629 796 aa4.06□□□□□ -1.76
HMGB1P22-201ENST00000505315 ITGA5P08648 1049 aa4.06□□□□□ -1.76
HMGB1P22-201ENST00000505315 RAC2P15153 192 aa4.06□□□□□ -1.76
HMGB1P22-201ENST00000505315 ATP6V1B1P15313 513 aa4.06□□□□□ -1.76
HMGB1P22-201ENST00000505315 HDCP19113 662 aa4.06□□□□□ -1.76
HMGB1P22-201ENST00000505315 CST5P28325 142 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P22-201ENST00000505315 ECHS1P30084 290 aa4.06□□□□□ -1.76
HMGB1P22-201ENST00000505315 AKT1P31749 480 aa4.06□□□□□ -1.76
HMGB1P22-201ENST00000505315 MC4RP32245 332 aa4.06□□□□□ -1.76
HMGB1P22-201ENST00000505315 HOXD13P35453 343 aa4.06□□□□□ -1.76
HMGB1P22-201ENST00000505315 PHKA1P46020 1223 aa4.06□□□□□ -1.76
HMGB1P22-201ENST00000505315 BCAT1P54687 386 aa4.06□□□□□ -1.76
HMGB1P22-201ENST00000505315 AP2B1P63010 937 aa4.06□□□□□ -1.76
HMGB1P22-201ENST00000505315 KRT83P78385 493 aa4.06□□□□□ -1.76
HMGB1P22-201ENST00000505315 TMF1P82094 1093 aa4.06□□□□□ -1.76
HMGB1P22-201ENST00000505315 CHRNDQ07001 517 aa4.06□□□□□ -1.76
HMGB1P22-201ENST00000505315 PPP3CAQ08209 521 aa4.06□□□□□ -1.76
HMGB1P22-201ENST00000505315 SNAPC2Q13487 334 aa4.06□□□□□ -1.76
HMGB1P22-201ENST00000505315 RAB32Q13637 225 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms