RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 ZBTB45Q96K62 511 aaPredicted RBP21.81■■□□□ 1.08
UBE2D3-220ENST00000505307 PLIN2Q99541 437 aa21.81■■□□□ 1.08
UBE2D3-220ENST00000505307 ANKFY1Q9P2R3 1169 aa21.81■■□□□ 1.08
UBE2D3-220ENST00000505307 NUMBLQ9Y6R0 609 aa21.81■■□□□ 1.08
UBE2D3-220ENST00000505307 I3L4J1 428 aa21.8■■□□□ 1.08
UBE2D3-220ENST00000505307 STK25O00506 426 aa21.8■■□□□ 1.08
UBE2D3-220ENST00000505307 GFRA3O60609 400 aa21.8■■□□□ 1.08
UBE2D3-220ENST00000505307 ELF1P32519 619 aa21.8■■□□□ 1.08
UBE2D3-220ENST00000505307 ABCD1P33897 745 aa21.8■■□□□ 1.08
UBE2D3-220ENST00000505307 NBL1P41271 181 aa21.8■■□□□ 1.08
UBE2D3-220ENST00000505307 NCKAP1LP55160 1127 aa21.8■■□□□ 1.08
UBE2D3-220ENST00000505307 SLC10A6Q3KNW5 377 aa21.8■■□□□ 1.08
UBE2D3-220ENST00000505307 VARS2Q5ST30 1063 aaKnown RBP21.8■■□□□ 1.08
UBE2D3-220ENST00000505307 PHLDB3Q6NSJ2 640 aa21.8■■□□□ 1.08
UBE2D3-220ENST00000505307 RSPO2Q6UXX9 243 aaPredicted RBP21.8■■□□□ 1.08
UBE2D3-220ENST00000505307 APPL2Q8NEU8 664 aa21.8■■□□□ 1.08
UBE2D3-220ENST00000505307 FGF13Q92913 245 aa21.8■■□□□ 1.08
UBE2D3-220ENST00000505307 TBC1D32Q96NH3 1257 aa21.8■■□□□ 1.08
UBE2D3-220ENST00000505307 TSPAN18Q96SJ8 248 aa21.8■■□□□ 1.08
UBE2D3-220ENST00000505307 MAFFQ9ULX9 164 aa21.8■■□□□ 1.08
UBE2D3-220ENST00000505307 ARHGEF37A1IGU5 675 aa21.79■■□□□ 1.08
UBE2D3-220ENST00000505307 KRBA1A5PL33 1030 aa21.79■■□□□ 1.08
UBE2D3-220ENST00000505307 PI15O43692 258 aa21.79■■□□□ 1.08
UBE2D3-220ENST00000505307 ABLIM3O94929 683 aa21.79■■□□□ 1.08
UBE2D3-220ENST00000505307 CLTAP09496 248 aa21.79■■□□□ 1.08
UBE2D3-220ENST00000505307 LONP1P36776 959 aaKnown RBP21.79■■□□□ 1.08
UBE2D3-220ENST00000505307 NTHL1P78549 312 aa21.79■■□□□ 1.08
UBE2D3-220ENST00000505307 PABPC1LQ4VXU2 614 aaKnown RBP21.79■■□□□ 1.08
UBE2D3-220ENST00000505307 ARSHQ5FYA8 562 aa21.79■■□□□ 1.08
UBE2D3-220ENST00000505307 TPGS2Q68CL5 300 aa21.79■■□□□ 1.08
UBE2D3-220ENST00000505307 HAUS6Q7Z4H7 955 aa21.79■■□□□ 1.08
UBE2D3-220ENST00000505307 DTWD2Q8NBA8 298 aa21.79■■□□□ 1.08
UBE2D3-220ENST00000505307 GPR152Q8TDT2 470 aa21.79■■□□□ 1.08
UBE2D3-220ENST00000505307 SUSD3Q96L08 255 aa21.79■■□□□ 1.08
UBE2D3-220ENST00000505307 AVENQ9NQS1 362 aaPredicted RBP21.79■■□□□ 1.08
UBE2D3-220ENST00000505307 CA14Q9ULX7 337 aa21.79■■□□□ 1.08
UBE2D3-220ENST00000505307 CITO14578 2027 aa21.79■■□□□ 1.08
UBE2D3-220ENST00000505307 TBC1D4O60343 1298 aa21.78■■□□□ 1.08
UBE2D3-220ENST00000505307 ATF2P15336 505 aa21.78■■□□□ 1.08
UBE2D3-220ENST00000505307 MATR3P43243 847 aaKnown RBP eCLIP21.78■■□□□ 1.08
UBE2D3-220ENST00000505307 ROR1Q01973 937 aa21.78■■□□□ 1.08
UBE2D3-220ENST00000505307 MRPL58Q14197 206 aaKnown RBP21.78■■□□□ 1.08
UBE2D3-220ENST00000505307 C18orf25Q96B23 403 aaPredicted RBP21.78■■□□□ 1.08
UBE2D3-220ENST00000505307 BICD1Q96G01 975 aa21.78■■□□□ 1.08
UBE2D3-220ENST00000505307 SHDQ96IW2 340 aa21.78■■□□□ 1.08
UBE2D3-220ENST00000505307 TBC1D17Q9HA65 648 aa21.78■■□□□ 1.08
UBE2D3-220ENST00000505307 ARHGEF3Q9NR81 526 aa21.78■■□□□ 1.08
UBE2D3-220ENST00000505307 DNMT3BQ9UBC3 853 aaKnown RBP21.78■■□□□ 1.08
UBE2D3-220ENST00000505307 PRRG1O14668 218 aa21.77■■□□□ 1.08
UBE2D3-220ENST00000505307 LRG1P02750 347 aa21.77■■□□□ 1.08
UBE2D3-220ENST00000505307 CYP3A5P20815 502 aa21.77■■□□□ 1.08
UBE2D3-220ENST00000505307 ZNF280DQ6N043 979 aa21.77■■□□□ 1.08
UBE2D3-220ENST00000505307 PARM1Q6UWI2 310 aa21.77■■□□□ 1.08
UBE2D3-220ENST00000505307 GPBP1Q86WP2 473 aa21.77■■□□□ 1.08
UBE2D3-220ENST00000505307 TCEAL8Q8IYN2 117 aa21.77■■□□□ 1.08
UBE2D3-220ENST00000505307 ITFG1Q8TB96 612 aa21.77■■□□□ 1.08
UBE2D3-220ENST00000505307 FGF14Q92915 247 aa21.77■■□□□ 1.08
UBE2D3-220ENST00000505307 REEP2Q9BRK0 252 aa21.77■■□□□ 1.08
UBE2D3-220ENST00000505307 OXCT2Q9BYC2 517 aaPredicted RBP21.77■■□□□ 1.08
UBE2D3-220ENST00000505307 PARVGQ9HBI0 331 aa21.77■■□□□ 1.08
UBE2D3-220ENST00000505307 GDE1Q9NZC3 331 aa21.77■■□□□ 1.08
UBE2D3-220ENST00000505307 MRPS23Q9Y3D9 190 aaKnown RBP21.77■■□□□ 1.08
UBE2D3-220ENST00000505307 MYH11P35749 1972 aa21.77■■□□□ 1.08
UBE2D3-220ENST00000505307 NPHP3-ACAD11A0A0J9YXS1 232 aa21.76■■□□□ 1.07
UBE2D3-220ENST00000505307 TTC26A0AVF1 554 aa21.76■■□□□ 1.07
UBE2D3-220ENST00000505307 MEFVO15553 781 aaPredicted RBP21.76■■□□□ 1.07
UBE2D3-220ENST00000505307 XPOTO43592 962 aaKnown RBP21.76■■□□□ 1.07
UBE2D3-220ENST00000505307 FAM13AO94988 1023 aa21.76■■□□□ 1.07
UBE2D3-220ENST00000505307 PTPN2P17706 415 aa21.76■■□□□ 1.07
UBE2D3-220ENST00000505307 PDCP20941 246 aa21.76■■□□□ 1.07
UBE2D3-220ENST00000505307 MARCKSP29966 332 aaPredicted RBP21.76■■□□□ 1.07
UBE2D3-220ENST00000505307 MCM4P33991 863 aa21.76■■□□□ 1.07
UBE2D3-220ENST00000505307 LIG4P49917 911 aa21.76■■□□□ 1.07
UBE2D3-220ENST00000505307 ZNF131P52739 623 aa21.76■■□□□ 1.07
UBE2D3-220ENST00000505307 CTXN3Q4LDR2 81 aa21.76■■□□□ 1.07
UBE2D3-220ENST00000505307 NPAS3Q8IXF0 933 aa21.76■■□□□ 1.07
UBE2D3-220ENST00000505307 MYCT1Q8N699 235 aa21.76■■□□□ 1.07
UBE2D3-220ENST00000505307 RASSF8Q8NHQ8 419 aa21.76■■□□□ 1.07
UBE2D3-220ENST00000505307 HCFC1R1Q9NWW0 138 aa21.76■■□□□ 1.07
UBE2D3-220ENST00000505307 FBXL5Q9UKA1 691 aa21.76■■□□□ 1.07
UBE2D3-220ENST00000505307 TBX20Q9UMR3 447 aa21.76■■□□□ 1.07
UBE2D3-220ENST00000505307 UBQLN1Q9UMX0 589 aaKnown RBP21.76■■□□□ 1.07
UBE2D3-220ENST00000505307 PCDHB8Q9UN66 801 aa21.76■■□□□ 1.07
UBE2D3-220ENST00000505307 ZFHX2Q9C0A1 2572 aaPredicted RBP21.76■■□□□ 1.07
UBE2D3-220ENST00000505307 USP34Q70CQ2 3546 aa21.76■■□□□ 1.07
UBE2D3-220ENST00000505307 DOCK6Q96HP0 2047 aa21.75■■□□□ 1.07
UBE2D3-220ENST00000505307 WDR27A2RRH5 827 aa21.75■■□□□ 1.07
UBE2D3-220ENST00000505307 HNRNPDLO14979 420 aaKnown RBP21.75■■□□□ 1.07
UBE2D3-220ENST00000505307 PIGRP01833 764 aa21.75■■□□□ 1.07
UBE2D3-220ENST00000505307 KRT18P05783 430 aaKnown RBP21.75■■□□□ 1.07
UBE2D3-220ENST00000505307 RHOP08100 348 aa21.75■■□□□ 1.07
UBE2D3-220ENST00000505307 CXCL8P10145 99 aa21.75■■□□□ 1.07
UBE2D3-220ENST00000505307 LRPAP1P30533 357 aa21.75■■□□□ 1.07
UBE2D3-220ENST00000505307 PFKPQ01813 784 aa21.75■■□□□ 1.07
UBE2D3-220ENST00000505307 CACNB1Q02641 598 aaPredicted RBP21.75■■□□□ 1.07
UBE2D3-220ENST00000505307 PPP2R3AQ06190 1150 aa21.75■■□□□ 1.07
UBE2D3-220ENST00000505307 ANGPT1Q15389 498 aa21.75■■□□□ 1.07
UBE2D3-220ENST00000505307 SEZ6Q53EL9 994 aa21.75■■□□□ 1.07
UBE2D3-220ENST00000505307 BLOC1S4Q9NUP1 217 aa21.75■■□□□ 1.07
UBE2D3-220ENST00000505307 SIT1Q9Y3P8 196 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms