RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 HACL1Q9UJ83 578 aa14.29□□□□□ -0.12
GPC1-209ENST00000495100 PNMA3Q9UL41 463 aa14.29□□□□□ -0.12
GPC1-209ENST00000495100 DNAH12Q6ZR08 3092 aa14.29□□□□□ -0.12
GPC1-209ENST00000495100 PRKCIP41743 596 aa14.29□□□□□ -0.12
GPC1-209ENST00000495100 SEMA3FQ13275 785 aa14.29□□□□□ -0.12
GPC1-209ENST00000495100 PPP2R5CQ13362 524 aa14.29□□□□□ -0.12
GPC1-209ENST00000495100 C1orf228Q6PIY5 440 aa14.29□□□□□ -0.12
GPC1-209ENST00000495100 OSBPL8Q9BZF1 889 aa14.29□□□□□ -0.12
GPC1-209ENST00000495100 FHDC1Q9C0D6 1143 aaPredicted RBP14.29□□□□□ -0.12
GPC1-209ENST00000495100 SLC9A2Q9UBY0 812 aa14.29□□□□□ -0.12
GPC1-209ENST00000495100 ZNF862O60290 1169 aa14.29□□□□□ -0.12
GPC1-209ENST00000495100 UBOX5O94941 541 aa14.29□□□□□ -0.12
GPC1-209ENST00000495100 SAT1P21673 171 aa14.29□□□□□ -0.12
GPC1-209ENST00000495100 GMPSP49915 693 aaPredicted RBP14.29□□□□□ -0.12
GPC1-209ENST00000495100 JAM2P57087 298 aa14.29□□□□□ -0.12
GPC1-209ENST00000495100 C6orf118Q5T5N4 469 aa14.29□□□□□ -0.12
GPC1-209ENST00000495100 MCTP2Q6DN12 878 aa14.29□□□□□ -0.12
GPC1-209ENST00000495100 ZNF662Q6ZS27 426 aa14.29□□□□□ -0.12
GPC1-209ENST00000495100 OTUD5Q96G74 571 aa14.29□□□□□ -0.12
GPC1-209ENST00000495100 MAK16Q9BXY0 300 aaKnown RBP14.29□□□□□ -0.12
GPC1-209ENST00000495100 TBC1D22BQ9NU19 505 aa14.29□□□□□ -0.12
GPC1-209ENST00000495100 MYH7BA7E2Y1 1941 aa14.29□□□□□ -0.12
GPC1-209ENST00000495100 MIF4GDA9UHW6 222 aaKnown RBP14.28□□□□□ -0.12
GPC1-209ENST00000495100 H7C0C1 242 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 PSMA2P25787 234 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 CCND2P30279 289 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 CIITAP33076 1130 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 ATP5OP48047 213 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 TAS2R40P59535 323 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 MXRA7P84157 204 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 EML3Q32P44 896 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 GNPTABQ3T906 1256 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 TTC17Q96AE7 1141 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 CFAP36Q96G28 342 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 CALR3Q96L12 384 aaKnown RBP14.28□□□□□ -0.12
GPC1-209ENST00000495100 OSBPL7Q9BZF2 842 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 PPP1R12CQ9BZL4 782 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 MIS12Q9H081 205 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 IQCGQ9H095 443 aaKnown RBP14.28□□□□□ -0.12
GPC1-209ENST00000495100 ATP6V0A4Q9HBG4 840 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 SLCO1B3Q9NPD5 702 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 KLHL14Q9P2G3 628 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 A8MUI8 341 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 PSAPP07602 524 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 SCTRP47872 440 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 NCOA4Q13772 614 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 FASTKD3Q14CZ7 662 aaKnown RBP14.28□□□□□ -0.12
GPC1-209ENST00000495100 CCDC6Q16204 474 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 GLIS1Q8NBF1 620 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 MICAL1Q8TDZ2 1067 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 FBF1Q8TES7 1133 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 TMEM237Q96Q45 408 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 IWS1Q96ST2 819 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 ZNRF3Q9ULT6 936 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 G3BP2Q9UN86 482 aaKnown RBP14.28□□□□□ -0.12
GPC1-209ENST00000495100 PRRC2BQ5JSZ5 2229 aaKnown RBP14.28□□□□□ -0.12
GPC1-209ENST00000495100 ECHS1P30084 290 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 CDR2Q01850 454 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 RCN2Q14257 317 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 ARHGAP27Q6ZUM4 889 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 MOB2Q70IA6 237 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 PPP1R14CQ8TAE6 165 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 RIT2Q99578 217 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 FAM49AQ9H0Q0 323 aaPredicted RBP14.28□□□□□ -0.12
GPC1-209ENST00000495100 GPATCH2LQ9NWQ4 482 aa14.28□□□□□ -0.12
GPC1-209ENST00000495100 ADGRA3Q8IWK6 1321 aa14.27□□□□□ -0.12
GPC1-209ENST00000495100 PODXLO00592 558 aa14.27□□□□□ -0.12
GPC1-209ENST00000495100 CHRNB2P17787 502 aa14.27□□□□□ -0.12
GPC1-209ENST00000495100 CPA2P48052 419 aa14.27□□□□□ -0.12
GPC1-209ENST00000495100 MYL6P60660 151 aa14.27□□□□□ -0.12
GPC1-209ENST00000495100 IFRD2Q12894 506 aaPredicted RBP14.27□□□□□ -0.12
GPC1-209ENST00000495100 BYSLQ13895 437 aaKnown RBP14.27□□□□□ -0.12
GPC1-209ENST00000495100 LY6KQ17RY6 165 aa14.27□□□□□ -0.12
GPC1-209ENST00000495100 ERICH1Q86X53 443 aa14.27□□□□□ -0.12
GPC1-209ENST00000495100 NSUN6Q8TEA1 469 aaKnown RBP14.27□□□□□ -0.12
GPC1-209ENST00000495100 HERPUD2Q9BSE4 406 aa14.27□□□□□ -0.12
GPC1-209ENST00000495100 MOV10L1Q9BXT6 1211 aaKnown RBP14.27□□□□□ -0.12
GPC1-209ENST00000495100 SLC13A1Q9BZW2 595 aa14.27□□□□□ -0.12
GPC1-209ENST00000495100 ETNK1Q9HBU6 452 aa14.27□□□□□ -0.12
GPC1-209ENST00000495100 SEPT10Q9P0V9 454 aa14.27□□□□□ -0.12
GPC1-209ENST00000495100 RIPK2O43353 540 aa14.27□□□□□ -0.13
GPC1-209ENST00000495100 STAM2O75886 525 aa14.27□□□□□ -0.13
GPC1-209ENST00000495100 RXRBP28702 533 aa14.27□□□□□ -0.13
GPC1-209ENST00000495100 WNT7BP56706 349 aa14.27□□□□□ -0.13
GPC1-209ENST00000495100 ITIH3Q06033 890 aa14.27□□□□□ -0.13
GPC1-209ENST00000495100 EMC2Q15006 297 aa14.27□□□□□ -0.13
GPC1-209ENST00000495100 GPAT2Q6NUI2 795 aa14.27□□□□□ -0.13
GPC1-209ENST00000495100 ZNF526Q8TF50 670 aaPredicted RBP14.27□□□□□ -0.13
GPC1-209ENST00000495100 ATXN7L3BQ96GX2 97 aa14.27□□□□□ -0.13
GPC1-209ENST00000495100 MKNK1Q9BUB5 465 aa14.27□□□□□ -0.13
GPC1-209ENST00000495100 STMN4Q9H169 189 aaPredicted RBP14.27□□□□□ -0.13
GPC1-209ENST00000495100 WNT8AQ9H1J5 351 aa14.27□□□□□ -0.13
GPC1-209ENST00000495100 ZNF302Q9NR11 478 aa14.27□□□□□ -0.13
GPC1-209ENST00000495100 TJP2Q9UDY2 1190 aa14.27□□□□□ -0.13
GPC1-209ENST00000495100 DNPEPQ9ULA0 475 aa14.27□□□□□ -0.13
GPC1-209ENST00000495100 STK24Q9Y6E0 443 aa14.27□□□□□ -0.13
GPC1-209ENST00000495100 A0A1B0GUL6 1792 aa14.27□□□□□ -0.13
GPC1-209ENST00000495100 ATP2A1O14983 1001 aa14.27□□□□□ -0.13
GPC1-209ENST00000495100 TRAPPC3O43617 180 aa14.27□□□□□ -0.13
GPC1-209ENST00000495100 CLCN3P51790 818 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms