RNA–Protein interactions for RNA: ENST00000486708.1

SFI1-224, Transcript of SFI1 centrin binding protein, human

TSL 2

Gene SFI1, Length 651 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-224	ENST00000486708	TAX1BP1	Q86VP1	789 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	TBC1D10C	Q8IV04	446 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	FAM20C	Q8IXL6	584 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	SHISA5	Q8N114	240 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	LCORL	Q8N3X6	602 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	MREG	Q8N565	214 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	CCDC63	Q8NA47	563 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	C3orf20	Q8ND61	904 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	TRIM58	Q8NG06	486 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	NOC3L	Q8WTT2	800 aa	Known RBP	4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	NSMCE1	Q8WV22	266 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	CASKIN2	Q8WXE0	1202 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	SOCS4	Q8WXH5	440 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	IFT81	Q8WYA0	676 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	WASF1	Q92558	559 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	RAPGEF5	Q92565	580 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	DHX38	Q92620	1227 aa	Known RBP	4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	STAM	Q92783	540 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	P3H4	Q92791	437 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	CUL5	Q93034	780 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	OSBP2	Q969R2	916 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	ITFG2	Q969R8	447 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	COA7	Q96BR5	231 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	ARMC5	Q96C12	935 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	SAAL1	Q96ER3	474 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	THOC1	Q96FV9	657 aa	Known RBP	4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	SEC16B	Q96JE7	1060 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	ZNF570	Q96NI8	536 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	ALS2CR12	Q96Q35	445 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	SPAG5	Q96R06	1193 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	STRBP	Q96SI9	672 aa	Known RBP	4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	OSBPL9	Q96SU4	736 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	PSMB7	Q99436	277 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	DNAJC7	Q99615	494 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	NUP58	Q9BVL2	599 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	TANGO6	Q9C0B7	1094 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	YIPF3	Q9GZM5	350 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	BLZF1	Q9H2G9	400 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	DNAJC18	Q9H819	358 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	KANSL2	Q9H9L4	492 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	TMBIM4	Q9HC24	238 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	GDF3	Q9NR23	364 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	HOMER3	Q9NSC5	361 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	RBM12	Q9NTZ6	932 aa	Known RBP	4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	ZNHIT6	Q9NWK9	470 aa	Known RBP	4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	VPS54	Q9P1Q0	977 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	LRWD1	Q9UFC0	647 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	FAM153A	Q9UHL3	310 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	SAP30BP	Q9UHR5	308 aa	Known RBP	4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	CAPN11	Q9UMQ6	739 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	NFU1	Q9UMS0	254 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	PLAA	Q9Y263	795 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	LUC7L2	Q9Y383	392 aa	Known RBP	4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	CAPN6	Q9Y6Q1	641 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	SLC4A4	Q9Y6R1	1079 aa		4.53	□□□□□ -1.68
SFI1-224	ENST00000486708	MYH7	P12883	1935 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	MYPN	Q86TC9	1320 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	ADGRA2	Q96PE1	1338 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708		A0A1W2PQC6	194 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	ERICH2	A1L162	156 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	TRIM49B	A6NDI0	452 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	4.52	□□□□□ -1.69
SFI1-224	ENST00000486708		B4DLN1	442 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708		B4E1Z4	1266 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	GCOM1	H8Y6P7	765 aa	Predicted RBP	4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	TNPO2	O14787	897 aa	Known RBP	4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	GPAA1	O43292	621 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	TRAPPC3	O43617	180 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	GAS2	O43903	313 aa	Known RBP	4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	ORC4	O43929	436 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	USO1	O60763	962 aa	Known RBP	4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	FGA	P02671	866 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	MYZAP	P0CAP1	466 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	DRD4	P21917	467 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	MAOB	P27338	520 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	TMOD1	P28289	359 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	CDC25C	P30307	473 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	MAPK4	P31152	587 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	DNAJA1	P31689	397 aa	Known RBP	4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	CXCR5	P32302	372 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	GUCY1A2	P33402	732 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	SHMT1	P34896	483 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	COPB2	P35606	906 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	HSPA9	P38646	679 aa	Known RBP	4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	PSMC4	P43686	418 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	KLK7	P49862	253 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	HMGCS2	P54868	508 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	CYP27A1	Q02318	531 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	GUCY2D	Q02846	1103 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	TRAF1	Q13077	416 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	KCNB1	Q14721	858 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	SLMAP	Q14BN4	828 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	SPA17	Q15506	151 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	CCDC85B	Q15834	202 aa	Predicted RBP	4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	NTRK3	Q16288	839 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	MEA1	Q16626	185 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	SLC9C1	Q4G0N8	1177 aa		4.52	□□□□□ -1.69
SFI1-224	ENST00000486708	TMEM67	Q5HYA8	995 aa		4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms