RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 TDP1Q9NUW8 608 aa5.46□□□□□ -1.54
VPS13A-211ENST00000484581 STAP2Q9UGK3 403 aa5.46□□□□□ -1.54
VPS13A-211ENST00000484581 PGAP2Q9UHJ9 254 aa5.46□□□□□ -1.54
VPS13A-211ENST00000484581 FEZ2Q9UHY8 353 aaPredicted RBP5.46□□□□□ -1.54
VPS13A-211ENST00000484581 OGDHLQ9ULD0 1010 aa5.46□□□□□ -1.54
VPS13A-211ENST00000484581 RPTORQ8N122 1335 aa5.46□□□□□ -1.54
VPS13A-211ENST00000484581 A0A1W2PR48 441 aa5.45□□□□□ -1.54
VPS13A-211ENST00000484581 POM121BA6NF01 834 aa5.45□□□□□ -1.54
VPS13A-211ENST00000484581 LRRC14BA6NHZ5 514 aa5.45□□□□□ -1.54
VPS13A-211ENST00000484581 MYO1FO00160 1098 aa5.45□□□□□ -1.54
VPS13A-211ENST00000484581 MUSKO15146 869 aa5.45□□□□□ -1.54
VPS13A-211ENST00000484581 IL18RAPO95256 599 aa5.45□□□□□ -1.54
VPS13A-211ENST00000484581 LTA4HP09960 611 aaKnown RBP5.45□□□□□ -1.54
VPS13A-211ENST00000484581 ECHS1P30084 290 aa5.45□□□□□ -1.54
VPS13A-211ENST00000484581 ACVRL1P37023 503 aa5.45□□□□□ -1.54
VPS13A-211ENST00000484581 TECP42680 631 aa5.45□□□□□ -1.54
VPS13A-211ENST00000484581 SELENOPP49908 381 aa5.45□□□□□ -1.54
VPS13A-211ENST00000484581 TARDBPQ13148 414 aaKnown RBP eCLIP5.45□□□□□ -1.544e-7■■■■□ 26.1
VPS13A-211ENST00000484581 BLMHQ13867 455 aa5.45□□□□□ -1.54
VPS13A-211ENST00000484581 MAPRE1Q15691 268 aaKnown RBP5.45□□□□□ -1.54
VPS13A-211ENST00000484581 MAN2A1Q16706 1144 aa5.45□□□□□ -1.54
VPS13A-211ENST00000484581 MST1LQ2TV78 715 aa5.45□□□□□ -1.54
VPS13A-211ENST00000484581 GRAMD4Q6IC98 578 aa5.45□□□□□ -1.54
VPS13A-211ENST00000484581 DPP8Q6V1X1 898 aaPredicted RBP5.45□□□□□ -1.54
VPS13A-211ENST00000484581 UNC5BQ8IZJ1 945 aa5.45□□□□□ -1.54
VPS13A-211ENST00000484581 Q8N1X5 172 aa5.45□□□□□ -1.54
VPS13A-211ENST00000484581 ARL8AQ96BM9 186 aa5.45□□□□□ -1.54
VPS13A-211ENST00000484581 CLPTM1LQ96KA5 538 aa5.45□□□□□ -1.54
VPS13A-211ENST00000484581 MSLNLQ96KJ4 702 aa5.45□□□□□ -1.54
VPS13A-211ENST00000484581 DMRTA2Q96SC8 542 aa5.45□□□□□ -1.54
VPS13A-211ENST00000484581 C14orf93Q9H972 538 aaKnown RBP5.45□□□□□ -1.54
VPS13A-211ENST00000484581 ZNF287Q9HBT7 754 aa5.45□□□□□ -1.54
VPS13A-211ENST00000484581 PNPOQ9NVS9 261 aa5.45□□□□□ -1.54
VPS13A-211ENST00000484581 CALCOCO1Q9P1Z2 691 aa5.45□□□□□ -1.54
VPS13A-211ENST00000484581 ARHGAP20Q9P2F6 1191 aa5.45□□□□□ -1.54
VPS13A-211ENST00000484581 ADAM29Q9UKF5 820 aa5.45□□□□□ -1.54
VPS13A-211ENST00000484581 PATE3B3GLJ2 98 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 H3BUI4 141 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 ADAMTS3O15072 1205 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 AKR1B10O60218 316 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 FGF18O76093 207 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 FSBPO95073 299 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 LY86O95711 162 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 CHGBP05060 677 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 FTH1P19P0C7X4 201 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 COL6A1P12109 1028 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 SLC7A1P30825 629 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 SLC6A9P48067 706 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 MAPK10P53779 464 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 CD83Q01151 205 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 LMOD3Q0VAK6 560 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 CNGA2Q16280 664 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 TMEM200BQ69YZ2 307 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 Q6ZUG5 572 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 RALYLQ86SE5 291 aaKnown RBP5.44□□□□□ -1.54
VPS13A-211ENST00000484581 PCGF5Q86SE9 256 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 RNF152Q8N8N0 203 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 NUDT10Q8NFP7 164 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 OR10H5Q8NGA6 315 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 SNX33Q8WV41 574 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 GCC1Q96CN9 775 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 NUDT11Q96G61 164 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 TMEM41AQ96HV5 264 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 MYLK2Q9H1R3 596 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 WDCPQ9H6R7 721 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 CNNM1Q9NRU3 951 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 SAGE1Q9NXZ1 904 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 C9orf78Q9NZ63 289 aaPredicted RBP5.44□□□□□ -1.54
VPS13A-211ENST00000484581 ABCF2Q9UG63 623 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 FBXO10Q9UK96 956 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 SIK3Q9Y2K2 1263 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 PCDHGB3Q9Y5G1 929 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 PCDHGB2Q9Y5G2 931 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 PCDHA3Q9Y5H8 950 aa5.44□□□□□ -1.54
VPS13A-211ENST00000484581 SLC26A4O43511 780 aa5.43□□□□□ -1.54
VPS13A-211ENST00000484581 IL18BPO95998 194 aa5.43□□□□□ -1.54
VPS13A-211ENST00000484581 SLPIP03973 132 aa5.43□□□□□ -1.54
VPS13A-211ENST00000484581 PARP1P09874 1014 aaKnown RBP5.43□□□□□ -1.54
VPS13A-211ENST00000484581 HSD3B1P14060 373 aa5.43□□□□□ -1.54
VPS13A-211ENST00000484581 BRAFP15056 766 aa5.43□□□□□ -1.54
VPS13A-211ENST00000484581 NPR1P16066 1061 aa5.43□□□□□ -1.54
VPS13A-211ENST00000484581 TLE1Q04724 770 aa5.43□□□□□ -1.54
VPS13A-211ENST00000484581 CD69Q07108 199 aa5.43□□□□□ -1.54
VPS13A-211ENST00000484581 PMS2P11Q13670 270 aa5.43□□□□□ -1.54
VPS13A-211ENST00000484581 STARD3Q14849 445 aa5.43□□□□□ -1.54
VPS13A-211ENST00000484581 KHDC1Q4VXA5 237 aaKnown RBP5.43□□□□□ -1.54
VPS13A-211ENST00000484581 C19orf54Q5BKX5 351 aa5.43□□□□□ -1.54
VPS13A-211ENST00000484581 PHF19Q5T6S3 580 aa5.43□□□□□ -1.54
VPS13A-211ENST00000484581 HIBCHQ6NVY1 386 aaPredicted RBP5.43□□□□□ -1.54
VPS13A-211ENST00000484581 MMS22LQ6ZRQ5 1243 aa5.43□□□□□ -1.54
VPS13A-211ENST00000484581 RSPH3Q86UC2 560 aa5.43□□□□□ -1.54
VPS13A-211ENST00000484581 LIX1LQ8IVB5 337 aa5.43□□□□□ -1.54
VPS13A-211ENST00000484581 BCL6BQ8N143 479 aaPredicted RBP5.43□□□□□ -1.54
VPS13A-211ENST00000484581 CCDC33Q8N5R6 958 aa5.43□□□□□ -1.54
VPS13A-211ENST00000484581 MYCT1Q8N699 235 aa5.43□□□□□ -1.54
VPS13A-211ENST00000484581 IFI44Q8TCB0 444 aa5.43□□□□□ -1.54
VPS13A-211ENST00000484581 BRIX1Q8TDN6 353 aaKnown RBP5.43□□□□□ -1.54
VPS13A-211ENST00000484581 ZNF480Q8WV37 535 aa5.43□□□□□ -1.54
VPS13A-211ENST00000484581 TRIM63Q969Q1 353 aa5.43□□□□□ -1.54
VPS13A-211ENST00000484581 CYFIP2Q96F07 1278 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms