RNA–Protein interactions for RNA: ENST00000478061.5

RBM28-204, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-204ENST00000478061 LMAN2LQ9H0V9 348 aa13.87□□□□□ -0.19
RBM28-204ENST00000478061 GZF1Q9H116 711 aaPredicted RBP13.87□□□□□ -0.19
RBM28-204ENST00000478061 PUF60Q9UHX1 559 aaKnown RBP13.87□□□□□ -0.19
RBM28-204ENST00000478061 CTNND2Q9UQB3 1225 aa13.87□□□□□ -0.19
RBM28-204ENST00000478061 FRMD4BQ9Y2L6 1034 aa13.87□□□□□ -0.19
RBM28-204ENST00000478061 MYO7AQ13402 2215 aa13.87□□□□□ -0.19
RBM28-204ENST00000478061 TDRD15B5MCY1 1934 aaKnown RBP13.86□□□□□ -0.19
RBM28-204ENST00000478061 TMEM189-UBE2V1I3L0A0 370 aa13.86□□□□□ -0.19
RBM28-204ENST00000478061 TADA2AO75478 443 aa13.86□□□□□ -0.19
RBM28-204ENST00000478061 AKAP3O75969 853 aa13.86□□□□□ -0.19
RBM28-204ENST00000478061 B3GAT3O94766 335 aa13.86□□□□□ -0.19
RBM28-204ENST00000478061 POU3F3P20264 500 aaPredicted RBP13.86□□□□□ -0.19
RBM28-204ENST00000478061 IGFBP4P22692 258 aa13.86□□□□□ -0.19
RBM28-204ENST00000478061 LRPAP1P30533 357 aa13.86□□□□□ -0.19
RBM28-204ENST00000478061 STX17P56962 302 aa13.86□□□□□ -0.19
RBM28-204ENST00000478061 NLRP12P59046 1061 aa13.86□□□□□ -0.19
RBM28-204ENST00000478061 ERVFC1P60507 584 aa13.86□□□□□ -0.19
RBM28-204ENST00000478061 TFAMQ00059 246 aaKnown RBP13.86□□□□□ -0.19
RBM28-204ENST00000478061 FKBP3Q00688 224 aaKnown RBP13.86□□□□□ -0.19
RBM28-204ENST00000478061 PAK1Q13153 545 aa13.86□□□□□ -0.19
RBM28-204ENST00000478061 SURF1Q15526 300 aa13.86□□□□□ -0.19
RBM28-204ENST00000478061 KLHL40Q2TBA0 621 aa13.86□□□□□ -0.19
RBM28-204ENST00000478061 DPCR1Q3MIW9 517 aa13.86□□□□□ -0.19
RBM28-204ENST00000478061 CAVIN1Q6NZI2 390 aaKnown RBP13.86□□□□□ -0.19
RBM28-204ENST00000478061 FOXR2Q6PJQ5 311 aa13.86□□□□□ -0.19
RBM28-204ENST00000478061 C3orf58Q8NDZ4 430 aa13.86□□□□□ -0.19
RBM28-204ENST00000478061 HASPINQ8TF76 798 aa13.86□□□□□ -0.19
RBM28-204ENST00000478061 CCDC127Q96BQ5 260 aa13.86□□□□□ -0.19
RBM28-204ENST00000478061 DUSP9Q99956 384 aaKnown RBP13.86□□□□□ -0.19
RBM28-204ENST00000478061 LMCD1Q9NZU5 365 aa13.86□□□□□ -0.19
RBM28-204ENST00000478061 ADAM28Q9UKQ2 775 aa13.86□□□□□ -0.19
RBM28-204ENST00000478061 MTCH2Q9Y6C9 303 aa13.86□□□□□ -0.19
RBM28-204ENST00000478061 PTPRJQ12913 1337 aa13.86□□□□□ -0.19
RBM28-204ENST00000478061 BICDL2A1A5D9 508 aa13.85□□□□□ -0.19
RBM28-204ENST00000478061 PPEF2O14830 753 aa13.85□□□□□ -0.19
RBM28-204ENST00000478061 FSCN2O14926 492 aa13.85□□□□□ -0.19
RBM28-204ENST00000478061 CETN3O15182 167 aa13.85□□□□□ -0.19
RBM28-204ENST00000478061 MAPK13O15264 365 aa13.85□□□□□ -0.19
RBM28-204ENST00000478061 CSPG5O95196 566 aa13.85□□□□□ -0.19
RBM28-204ENST00000478061 DLATP10515 647 aaKnown RBP13.85□□□□□ -0.19
RBM28-204ENST00000478061 IRS1P35568 1242 aa13.85□□□□□ -0.19
RBM28-204ENST00000478061 PSMC2P35998 433 aaKnown RBP13.85□□□□□ -0.19
RBM28-204ENST00000478061 PTPROQ16827 1216 aa13.85□□□□□ -0.19
RBM28-204ENST00000478061 C9orf57Q5W0N0 161 aa13.85□□□□□ -0.19
RBM28-204ENST00000478061 LMBRD2Q68DH5 695 aaPredicted RBP13.85□□□□□ -0.19
RBM28-204ENST00000478061 FUT10Q6P4F1 479 aa13.85□□□□□ -0.19
RBM28-204ENST00000478061 TAS1R1Q7RTX1 841 aa13.85□□□□□ -0.19
RBM28-204ENST00000478061 RNF168Q8IYW5 571 aaPredicted RBP13.85□□□□□ -0.19
RBM28-204ENST00000478061 VPS52Q8N1B4 723 aa13.85□□□□□ -0.19
RBM28-204ENST00000478061 OR5B17Q8NGF7 314 aa13.85□□□□□ -0.19
RBM28-204ENST00000478061 TMC2Q8TDI7 906 aa13.85□□□□□ -0.19
RBM28-204ENST00000478061 PARD3BQ8TEW8 1205 aa13.85□□□□□ -0.19
RBM28-204ENST00000478061 CACTINQ8WUQ7 758 aaKnown RBP13.85□□□□□ -0.19
RBM28-204ENST00000478061 MED15Q96RN5 788 aa13.85□□□□□ -0.19
RBM28-204ENST00000478061 FNBP1Q96RU3 617 aa13.85□□□□□ -0.19
RBM28-204ENST00000478061 POP1Q99575 1024 aaKnown RBP13.85□□□□□ -0.19
RBM28-204ENST00000478061 GPR62Q9BZJ7 368 aa13.85□□□□□ -0.19
RBM28-204ENST00000478061 TLR9Q9NR96 1032 aa13.85□□□□□ -0.19
RBM28-204ENST00000478061 INTS13Q9NVM9 706 aa13.85□□□□□ -0.19
RBM28-204ENST00000478061 DPP3Q9NY33 737 aa13.85□□□□□ -0.19
RBM28-204ENST00000478061 PCDHGC5Q9Y5F6 944 aa13.85□□□□□ -0.19
RBM28-204ENST00000478061 CDH23Q9H251 3354 aa13.85□□□□□ -0.19
RBM28-204ENST00000478061 TRANK1O15050 2925 aa13.85□□□□□ -0.19
RBM28-204ENST00000478061 PRRC2BQ5JSZ5 2229 aaKnown RBP13.84□□□□□ -0.19
RBM28-204ENST00000478061 ANO9A1A5B4 782 aa13.84□□□□□ -0.19
RBM28-204ENST00000478061 PIRO00625 290 aa13.84□□□□□ -0.19
RBM28-204ENST00000478061 FOSL2P15408 326 aa13.84□□□□□ -0.19
RBM28-204ENST00000478061 CLDN10P78369 228 aa13.84□□□□□ -0.19
RBM28-204ENST00000478061 DUOXA2Q1HG44 320 aa13.84□□□□□ -0.19
RBM28-204ENST00000478061 WDR49Q8IV35 697 aa13.84□□□□□ -0.19
RBM28-204ENST00000478061 FAM186BQ8IYM0 893 aa13.84□□□□□ -0.19
RBM28-204ENST00000478061 C1orf127Q8N9H9 656 aa13.84□□□□□ -0.19
RBM28-204ENST00000478061 CXorf38Q8TB03 319 aa13.84□□□□□ -0.19
RBM28-204ENST00000478061 ZNF516Q92618 1163 aa13.84□□□□□ -0.19
RBM28-204ENST00000478061 SYAP1Q96A49 352 aaPredicted RBP13.84□□□□□ -0.19
RBM28-204ENST00000478061 BORCS6Q96GS4 357 aa13.84□□□□□ -0.19
RBM28-204ENST00000478061 CGRRF1Q99675 332 aa13.84□□□□□ -0.19
RBM28-204ENST00000478061 MKNK1Q9BUB5 465 aa13.84□□□□□ -0.19
RBM28-204ENST00000478061 HERC2P3Q9BVR0 1158 aa13.84□□□□□ -0.19
RBM28-204ENST00000478061 MTMR12Q9C0I1 747 aa13.84□□□□□ -0.19
RBM28-204ENST00000478061 ZBP1Q9H171 429 aa13.84□□□□□ -0.19
RBM28-204ENST00000478061 STK39Q9UEW8 545 aa13.84□□□□□ -0.19
RBM28-204ENST00000478061 RWDD2AQ9UIY3 292 aa13.84□□□□□ -0.19
RBM28-204ENST00000478061 SF3B1O75533 1304 aaKnown RBP eCLIP13.84□□□□□ -0.198e-7■■■■■ 129.2
RBM28-204ENST00000478061 ANK1P16157 1881 aa13.83□□□□□ -0.2
RBM28-204ENST00000478061 PDCD11Q14690 1871 aaKnown RBP13.83□□□□□ -0.2
RBM28-204ENST00000478061 COL4A4P53420 1690 aaPredicted RBP13.83□□□□□ -0.2
RBM28-204ENST00000478061 LRRIQ3A6PVS8 624 aaPredicted RBP13.83□□□□□ -0.2
RBM28-204ENST00000478061 I3L4J1 428 aa13.83□□□□□ -0.2
RBM28-204ENST00000478061 SOD2P04179 222 aa13.83□□□□□ -0.2
RBM28-204ENST00000478061 TMEM191BP0C7N4 346 aa13.83□□□□□ -0.2
RBM28-204ENST00000478061 CTSAP10619 480 aa13.83□□□□□ -0.2
RBM28-204ENST00000478061 EPB41P11171 864 aaKnown RBP13.83□□□□□ -0.2
RBM28-204ENST00000478061 TNNI1P19237 187 aa13.83□□□□□ -0.2
RBM28-204ENST00000478061 BRCC3P46736 316 aa13.83□□□□□ -0.2
RBM28-204ENST00000478061 MCCD1P59942 119 aaPredicted RBP13.83□□□□□ -0.2
RBM28-204ENST00000478061 DLG4P78352 724 aa13.83□□□□□ -0.2
RBM28-204ENST00000478061 ELAVL2Q12926 359 aaKnown RBP13.83□□□□□ -0.2
RBM28-204ENST00000478061 C1orf220Q5T0J3 134 aa13.83□□□□□ -0.2
RBM28-204ENST00000478061 SCARA3Q6AZY7 606 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms