RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 MTHFRP42898 656 aa9.01□□□□□ -0.97
HDAC6-221ENST00000477561 ACOT2P49753 483 aa9.01□□□□□ -0.97
HDAC6-221ENST00000477561 GUCY2FP51841 1108 aa9.01□□□□□ -0.97
HDAC6-221ENST00000477561 CASP5P51878 434 aa9.01□□□□□ -0.97
HDAC6-221ENST00000477561 PPP2R3AQ06190 1150 aa9.01□□□□□ -0.97
HDAC6-221ENST00000477561 ELAVL2Q12926 359 aaKnown RBP9.01□□□□□ -0.97
HDAC6-221ENST00000477561 PSMD5Q16401 504 aa9.01□□□□□ -0.97
HDAC6-221ENST00000477561 ATAT1Q5SQI0 421 aa9.01□□□□□ -0.97
HDAC6-221ENST00000477561 ADALQ6DHV7 355 aa9.01□□□□□ -0.97
HDAC6-221ENST00000477561 LEO1Q8WVC0 666 aaPredicted RBP9.01□□□□□ -0.97
HDAC6-221ENST00000477561 PIK3R5Q8WYR1 880 aa9.01□□□□□ -0.97
HDAC6-221ENST00000477561 KCNN1Q92952 543 aa9.01□□□□□ -0.97
HDAC6-221ENST00000477561 KIF12Q96FN5 646 aa9.01□□□□□ -0.97
HDAC6-221ENST00000477561 DDX27Q96GQ7 796 aaKnown RBP9.01□□□□□ -0.97
HDAC6-221ENST00000477561 RIPOR3Q96MK2 946 aa9.01□□□□□ -0.97
HDAC6-221ENST00000477561 CLSTN3Q9BQT9 956 aa9.01□□□□□ -0.97
HDAC6-221ENST00000477561 BLZF1Q9H2G9 400 aa9.01□□□□□ -0.97
HDAC6-221ENST00000477561 ST6GALNAC4Q9H4F1 302 aa9.01□□□□□ -0.97
HDAC6-221ENST00000477561 SFXN1Q9H9B4 322 aa9.01□□□□□ -0.97
HDAC6-221ENST00000477561 RPF1Q9H9Y2 349 aaKnown RBP9.01□□□□□ -0.97
HDAC6-221ENST00000477561 GDPD2Q9HCC8 539 aa9.01□□□□□ -0.97
HDAC6-221ENST00000477561 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.01□□□□□ -0.97
HDAC6-221ENST00000477561 RCOR1Q9UKL0 485 aa9.01□□□□□ -0.97
HDAC6-221ENST00000477561 NUB1Q9Y5A7 615 aa9.01□□□□□ -0.97
HDAC6-221ENST00000477561 MYH15Q9Y2K3 1946 aa9.01□□□□□ -0.97
HDAC6-221ENST00000477561 CCDC195A0A1B0GUA6 201 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 TTC26A0AVF1 554 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 FRMD3A2A2Y4 597 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 C2CD4DB7Z1M9 353 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 TMEM189-UBE2V1I3L0A0 370 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 DCXO43602 365 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 TRAPPC3O43617 180 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 PPP1R37O75864 691 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 PRPF6O94906 941 aaKnown RBP9□□□□□ -0.97
HDAC6-221ENST00000477561 ALADP13716 330 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 SCP2P22307 547 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 FGFR3P22607 806 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 RPL9P32969 192 aaKnown RBP9□□□□□ -0.97
HDAC6-221ENST00000477561 OR1D2P34982 312 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 AFMP43652 599 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 ASIC1P78348 528 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 L1TD1Q5T7N2 865 aaKnown RBP9□□□□□ -0.97
HDAC6-221ENST00000477561 RESP18Q5W5W9 173 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 JADE1Q6IE81 842 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 LILRA6Q6PI73 481 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 RSPO2Q6UXX9 243 aaPredicted RBP9□□□□□ -0.97
HDAC6-221ENST00000477561 PDZRN4Q6ZMN7 1036 aaPredicted RBP9□□□□□ -0.97
HDAC6-221ENST00000477561 GPR149Q86SP6 731 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 CCDC65Q8IXS2 484 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 SYCP3Q8IZU3 236 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 IQUBQ8NA54 791 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 KREMEN2Q8NCW0 462 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 GLIS3Q8NEA6 775 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 ZSWIM2Q8NEG5 633 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 NOC3LQ8WTT2 800 aaKnown RBP9□□□□□ -0.97
HDAC6-221ENST00000477561 POMGNT1Q8WZA1 660 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 SYAP1Q96A49 352 aaPredicted RBP9□□□□□ -0.97
HDAC6-221ENST00000477561 NECTIN4Q96NY8 510 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 ACCSQ96QU6 501 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 STRA6Q9BX79 667 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 C1QTNF1Q9BXJ1 281 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 TRIM9Q9C026 710 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 TNMDQ9H2S6 317 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 PLEKHA5Q9HAU0 1116 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 C11orf16Q9NQ32 467 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 KBTBD4Q9NVX7 518 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 FAM13BQ9NYF5 915 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 FNIP2Q9P278 1114 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 SEL1LQ9UBV2 794 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 RAPGEFL1Q9UHV5 662 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 CPSF3Q9UKF6 684 aaKnown RBP9□□□□□ -0.97
HDAC6-221ENST00000477561 AGO2Q9UKV8 859 aaKnown RBP9□□□□□ -0.97
HDAC6-221ENST00000477561 PCDHB13Q9Y5F0 798 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 CDY1Q9Y6F8 540 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 TRIP11Q15643 1979 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 NCOR1O75376 2440 aa9□□□□□ -0.97
HDAC6-221ENST00000477561 A0A1B0GVL5 298 aa8.99□□□□□ -0.97
HDAC6-221ENST00000477561 GOLGA8IPA6NC78 632 aa8.99□□□□□ -0.97
HDAC6-221ENST00000477561 GOLGA8JA6NMD2 632 aa8.99□□□□□ -0.97
HDAC6-221ENST00000477561 PPEF2O14830 753 aa8.99□□□□□ -0.97
HDAC6-221ENST00000477561 NFICP08651 508 aa8.99□□□□□ -0.97
HDAC6-221ENST00000477561 ADSSP30520 456 aa8.99□□□□□ -0.97
HDAC6-221ENST00000477561 ABCD1P33897 745 aa8.99□□□□□ -0.97
HDAC6-221ENST00000477561 ARPP19P56211 112 aa8.99□□□□□ -0.97
HDAC6-221ENST00000477561 AMPD3Q01432 767 aa8.99□□□□□ -0.97
HDAC6-221ENST00000477561 CREMQ03060 361 aa8.99□□□□□ -0.97
HDAC6-221ENST00000477561 ZBTB6Q15916 424 aa8.99□□□□□ -0.97
HDAC6-221ENST00000477561 KYAT1Q16773 422 aa8.99□□□□□ -0.97
HDAC6-221ENST00000477561 TMEM31Q5JXX7 168 aa8.99□□□□□ -0.97
HDAC6-221ENST00000477561 SLFN12LQ6IEE8 588 aa8.99□□□□□ -0.97
HDAC6-221ENST00000477561 GPR65Q8IYL9 337 aa8.99□□□□□ -0.97
HDAC6-221ENST00000477561 GRAMD1CQ8IYS0 662 aa8.99□□□□□ -0.97
HDAC6-221ENST00000477561 HVCN1Q96D96 273 aa8.99□□□□□ -0.97
HDAC6-221ENST00000477561 SAAL1Q96ER3 474 aa8.99□□□□□ -0.97
HDAC6-221ENST00000477561 LRFN3Q9BTN0 628 aa8.99□□□□□ -0.97
HDAC6-221ENST00000477561 LRRC27Q9C0I9 530 aa8.99□□□□□ -0.97
HDAC6-221ENST00000477561 CUEDC2Q9H467 287 aa8.99□□□□□ -0.97
HDAC6-221ENST00000477561 PLEKHA4Q9H4M7 779 aa8.99□□□□□ -0.97
HDAC6-221ENST00000477561 PCIF1Q9H4Z3 704 aa8.99□□□□□ -0.97
HDAC6-221ENST00000477561 PIDD1Q9HB75 910 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms