RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 TSNAXIP1Q2TAA8 658 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 MGAT5BQ3V5L5 792 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 GLE1Q53GS7 698 aaKnown RBP4.89□□□□□ -1.63
CCNL1-215ENST00000474539 CENPUQ71F23 418 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 CCNJLQ8IV13 435 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 SUGP1Q8IWZ8 645 aaKnown RBP4.89□□□□□ -1.63
CCNL1-215ENST00000474539 LZTR1Q8N653 840 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 ANKLE1Q8NAG6 615 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 TTC8Q8TAM2 541 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 GIPC2Q8TF65 315 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 UBLCP1Q8WVY7 318 aaPredicted RBP4.89□□□□□ -1.63
CCNL1-215ENST00000474539 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.89□□□□□ -1.63
CCNL1-215ENST00000474539 KCNB2Q92953 911 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 HIST1H2AHQ96KK5 128 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 HIST1H2AJQ99878 128 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 FAM213AQ9BRX8 229 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 H2AFJQ9BTM1 129 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 C11orf84Q9BUA3 381 aaPredicted RBP4.89□□□□□ -1.63
CCNL1-215ENST00000474539 BLZF1Q9H2G9 400 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 NDST4Q9H3R1 872 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 KCNK9Q9NPC2 374 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 TLR7Q9NYK1 1049 aaKnown RBP4.89□□□□□ -1.63
CCNL1-215ENST00000474539 KLHL8Q9P2G9 620 aaPredicted RBP4.89□□□□□ -1.63
CCNL1-215ENST00000474539 GIT1Q9Y2X7 761 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 A0A1W2PQC6 194 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 F5H5T6 163 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 KRIT1O00522 736 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 SLC16A4O15374 487 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 JAK2O60674 1132 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 SNX2O60749 519 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 VDRP11473 427 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 CYP2A6P11509 494 aaPredicted RBP4.89□□□□□ -1.63
CCNL1-215ENST00000474539 ITGB6P18564 788 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 CES1P23141 567 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 ZNF75DP51815 510 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 NAA20P61599 178 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 ACCSLQ4AC99 568 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 CTXN3Q4LDR2 81 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 RNF187Q5TA31 235 aaPredicted RBP4.89□□□□□ -1.63
CCNL1-215ENST00000474539 FAM46CQ5VWP2 391 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 TYW1BQ6NUM6 668 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 ERAP2Q6P179 960 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 SFR1Q86XK3 245 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 RHOT1Q8IXI2 618 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 PBXIP1Q96AQ6 731 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 SPACA7Q96KW9 195 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 PAIP2Q9BPZ3 127 aaKnown RBP4.89□□□□□ -1.63
CCNL1-215ENST00000474539 HINFPQ9BQA5 517 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 TRIM15Q9C019 465 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 TMEM134Q9H6X4 195 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 DZANK1Q9NVP4 752 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 AGAP1Q9UPQ3 857 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 PGRMC1O00264 195 aaKnown RBP4.88□□□□□ -1.63
CCNL1-215ENST00000474539 KRT38O76015 456 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 TTC4O95801 387 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 MYCP01106 439 aaPredicted RBP4.88□□□□□ -1.63
CCNL1-215ENST00000474539 CYP3A4P08684 503 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 CSH1P0DML2 217 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 CSH2P0DML3 217 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 CYP2D6P10635 497 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 HSPA9P38646 679 aaKnown RBP4.88□□□□□ -1.63
CCNL1-215ENST00000474539 MAPK9P45984 424 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 TPI1P60174 286 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 ITGA9Q13797 1035 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 PDK1Q15118 436 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 RBBP5Q15291 538 aaKnown RBP4.88□□□□□ -1.63
CCNL1-215ENST00000474539 GRIK4Q16099 956 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 KLHL38Q2WGJ6 581 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 SYTL3Q4VX76 610 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 NBPF12Q5TAG4 269 aaPredicted RBP4.88□□□□□ -1.63
CCNL1-215ENST00000474539 TTC30AQ86WT1 665 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 LRRC49Q8IUZ0 686 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 WDR49Q8IV35 697 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 TRIM48Q8IWZ4 208 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 CTAGE3PQ8IX95 158 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 SLC44A5Q8NCS7 719 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 PPHLN1Q8NEY8 458 aaKnown RBP4.88□□□□□ -1.63
CCNL1-215ENST00000474539 HELQQ8TDG4 1101 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 HDAC11Q96DB2 347 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 MTBPQ96DY7 904 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 SELENOSQ9BQE4 189 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 C11orf49Q9H6J7 331 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 GDPD2Q9HCC8 539 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 TBC1D14Q9P2M4 693 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 PLA2G4CQ9UP65 541 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 STK38LQ9Y2H1 464 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 NR2E1Q9Y466 385 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 NEDD4P46934 1319 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 H2AFYO75367 372 aaKnown RBP4.88□□□□□ -1.63
CCNL1-215ENST00000474539 KRT37O76014 449 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 GSPT1P15170 499 aaKnown RBP4.88□□□□□ -1.63
CCNL1-215ENST00000474539 SELPP16109 830 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 KELP23276 732 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 PTPN3P26045 913 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 ARL4CP56559 192 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 RNASE9P60153 205 aaKnown RBP4.88□□□□□ -1.63
CCNL1-215ENST00000474539 CUL1Q13616 776 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 ANKRD20A3Q5VUR7 823 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 HEATR6Q6AI08 1181 aaKnown RBP4.88□□□□□ -1.63
CCNL1-215ENST00000474539 NFRKBQ6P4R8 1299 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms