RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 FAM189A1O60320 539 aa9.84□□□□□ -0.83
USF1-204ENST00000472217 PIGRP01833 764 aa9.84□□□□□ -0.83
USF1-204ENST00000472217 CLTAP09496 248 aa9.84□□□□□ -0.83
USF1-204ENST00000472217 HNRNPA1P09651 372 aaKnown RBP eCLIP9.84□□□□□ -0.83
USF1-204ENST00000472217 SCP2P22307 547 aa9.84□□□□□ -0.83
USF1-204ENST00000472217 NMT1P30419 496 aaKnown RBP9.84□□□□□ -0.83
USF1-204ENST00000472217 RPL9P32969 192 aaKnown RBP9.84□□□□□ -0.83
USF1-204ENST00000472217 DDIT3P35638 169 aa9.84□□□□□ -0.83
USF1-204ENST00000472217 VCPP55072 806 aaKnown RBP9.84□□□□□ -0.83
USF1-204ENST00000472217 NHLH1Q02575 133 aa9.84□□□□□ -0.83
USF1-204ENST00000472217 SPAG1Q07617 926 aa9.84□□□□□ -0.83
USF1-204ENST00000472217 TDGQ13569 410 aa9.84□□□□□ -0.83
USF1-204ENST00000472217 ZC2HC1CQ53FD0 456 aaPredicted RBP9.84□□□□□ -0.83
USF1-204ENST00000472217 PPM1LQ5SGD2 360 aa9.84□□□□□ -0.83
USF1-204ENST00000472217 VARS2Q5ST30 1063 aaKnown RBP9.84□□□□□ -0.83
USF1-204ENST00000472217 ZBTB41Q5SVQ8 909 aa9.84□□□□□ -0.83
USF1-204ENST00000472217 AXDND1Q5T1B0 1012 aaPredicted RBP9.84□□□□□ -0.83
USF1-204ENST00000472217 SLC39A4Q6P5W5 647 aa9.84□□□□□ -0.83
USF1-204ENST00000472217 GET4Q7L5D6 327 aaPredicted RBP9.84□□□□□ -0.83
USF1-204ENST00000472217 GRASPQ7Z6J2 395 aaPredicted RBP9.84□□□□□ -0.83
USF1-204ENST00000472217 MAP4K3Q8IVH8 894 aa9.84□□□□□ -0.83
USF1-204ENST00000472217 TMEM130Q8N3G9 435 aa9.84□□□□□ -0.83
USF1-204ENST00000472217 PRSS33Q8NF86 280 aa9.84□□□□□ -0.83
USF1-204ENST00000472217 SLC7A14Q8TBB6 771 aa9.84□□□□□ -0.83
USF1-204ENST00000472217 RSAD2Q8WXG1 361 aa9.84□□□□□ -0.83
USF1-204ENST00000472217 USP28Q96RU2 1077 aa9.84□□□□□ -0.83
USF1-204ENST00000472217 PLEKHA5Q9HAU0 1116 aa9.84□□□□□ -0.83
USF1-204ENST00000472217 IGSF9Q9P2J2 1179 aa9.84□□□□□ -0.83
USF1-204ENST00000472217 EPS15L1Q9UBC2 864 aa9.84□□□□□ -0.83
USF1-204ENST00000472217 STK17AQ9UEE5 414 aa9.84□□□□□ -0.83
USF1-204ENST00000472217 NUB1Q9Y5A7 615 aa9.84□□□□□ -0.83
USF1-204ENST00000472217 TISP43B9A030 160 aa9.83□□□□□ -0.84
USF1-204ENST00000472217 ANKRD63C9JTQ0 380 aa9.83□□□□□ -0.84
USF1-204ENST00000472217 SYN3O14994 580 aa9.83□□□□□ -0.84
USF1-204ENST00000472217 OGTO15294 1046 aa9.83□□□□□ -0.84
USF1-204ENST00000472217 CCL16O15467 120 aa9.83□□□□□ -0.84
USF1-204ENST00000472217 AVPR2P30518 371 aa9.83□□□□□ -0.84
USF1-204ENST00000472217 HOXA9P31269 272 aa9.83□□□□□ -0.84
USF1-204ENST00000472217 NTHL1P78549 312 aa9.83□□□□□ -0.84
USF1-204ENST00000472217 GTF2BQ00403 316 aa9.83□□□□□ -0.84
USF1-204ENST00000472217 ROR1Q01973 937 aa9.83□□□□□ -0.84
USF1-204ENST00000472217 PPP2R3AQ06190 1150 aa9.83□□□□□ -0.84
USF1-204ENST00000472217 SLC39A14Q15043 492 aa9.83□□□□□ -0.84
USF1-204ENST00000472217 ENOX2Q16206 610 aaKnown RBP9.83□□□□□ -0.84
USF1-204ENST00000472217 RRAGBQ5VZM2 374 aa9.83□□□□□ -0.84
USF1-204ENST00000472217 SLC8B1Q6J4K2 584 aa9.83□□□□□ -0.84
USF1-204ENST00000472217 DYMQ7RTS9 669 aa9.83□□□□□ -0.84
USF1-204ENST00000472217 SFR1Q86XK3 245 aa9.83□□□□□ -0.84
USF1-204ENST00000472217 KRI1Q8N9T8 703 aaKnown RBP9.83□□□□□ -0.84
USF1-204ENST00000472217 SUSD3Q96L08 255 aa9.83□□□□□ -0.84
USF1-204ENST00000472217 ZSCAN16Q9H4T2 348 aaPredicted RBP9.83□□□□□ -0.84
USF1-204ENST00000472217 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.83□□□□□ -0.84
USF1-204ENST00000472217 CCDC39Q9UFE4 941 aa9.83□□□□□ -0.84
USF1-204ENST00000472217 POLIQ9UNA4 740 aa9.83□□□□□ -0.84
USF1-204ENST00000472217 DUSP12Q9UNI6 340 aa9.83□□□□□ -0.84
USF1-204ENST00000472217 MORC2Q9Y6X9 1032 aaPredicted RBP9.83□□□□□ -0.84
USF1-204ENST00000472217 A0A087X0B3 334 aa9.82□□□□□ -0.84
USF1-204ENST00000472217 A0A0B4J269 797 aa9.82□□□□□ -0.84
USF1-204ENST00000472217 WDR27A2RRH5 827 aa9.82□□□□□ -0.84
USF1-204ENST00000472217 MYMKA6NI61 221 aa9.82□□□□□ -0.84
USF1-204ENST00000472217 LACTBL1A8MY62 500 aa9.82□□□□□ -0.84
USF1-204ENST00000472217 H7C4K7 107 aa9.82□□□□□ -0.84
USF1-204ENST00000472217 NARSO43776 548 aaKnown RBP9.82□□□□□ -0.84
USF1-204ENST00000472217 TBC1D4O60343 1298 aa9.82□□□□□ -0.84
USF1-204ENST00000472217 XYLBO75191 536 aa9.82□□□□□ -0.84
USF1-204ENST00000472217 ABLIM3O94929 683 aa9.82□□□□□ -0.84
USF1-204ENST00000472217 ADRB2P07550 413 aa9.82□□□□□ -0.84
USF1-204ENST00000472217 POU2F2P09086 479 aa9.82□□□□□ -0.84
USF1-204ENST00000472217 LAMP2P13473 410 aa9.82□□□□□ -0.84
USF1-204ENST00000472217 FSHRP23945 695 aa9.82□□□□□ -0.84
USF1-204ENST00000472217 LRPAP1P30533 357 aa9.82□□□□□ -0.84
USF1-204ENST00000472217 ABCD1P33897 745 aa9.82□□□□□ -0.84
USF1-204ENST00000472217 MCM4P33991 863 aa9.82□□□□□ -0.84
USF1-204ENST00000472217 TXLNAP40222 546 aa9.82□□□□□ -0.84
USF1-204ENST00000472217 NASPP49321 788 aaPredicted RBP9.82□□□□□ -0.84
USF1-204ENST00000472217 GUCY2FP51841 1108 aa9.82□□□□□ -0.84
USF1-204ENST00000472217 ARPP19P56211 112 aa9.82□□□□□ -0.84
USF1-204ENST00000472217 MRPL58Q14197 206 aaKnown RBP9.82□□□□□ -0.84
USF1-204ENST00000472217 ZBTB6Q15916 424 aa9.82□□□□□ -0.84
USF1-204ENST00000472217 KYAT1Q16773 422 aa9.82□□□□□ -0.84
USF1-204ENST00000472217 UVSSAQ2YD98 709 aa9.82□□□□□ -0.84
USF1-204ENST00000472217 SV2BQ7L1I2 683 aa9.82□□□□□ -0.84
USF1-204ENST00000472217 ZNF461Q8TAF7 563 aa9.82□□□□□ -0.84
USF1-204ENST00000472217 DDX12PQ92771 950 aa9.82□□□□□ -0.84
USF1-204ENST00000472217 SNX21Q969T3 373 aa9.82□□□□□ -0.84
USF1-204ENST00000472217 DNAJC19Q96DA6 116 aa9.82□□□□□ -0.84
USF1-204ENST00000472217 KIF12Q96FN5 646 aa9.82□□□□□ -0.84
USF1-204ENST00000472217 MSTO1Q9BUK6 570 aa9.82□□□□□ -0.84
USF1-204ENST00000472217 IKZF4Q9H2S9 585 aa9.82□□□□□ -0.84
USF1-204ENST00000472217 ST6GALNAC4Q9H4F1 302 aa9.82□□□□□ -0.84
USF1-204ENST00000472217 HCFC1R1Q9NWW0 138 aa9.82□□□□□ -0.84
USF1-204ENST00000472217 CPSF3Q9UKF6 684 aaKnown RBP9.82□□□□□ -0.84
USF1-204ENST00000472217 UBQLN1Q9UMX0 589 aaKnown RBP9.82□□□□□ -0.84
USF1-204ENST00000472217 DOCK8Q8NF50 2099 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 MYO10Q9HD67 2058 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 MUC6Q6W4X9 2439 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 ANHXE9PGG2 379 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 PPEF2O14830 753 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 PPP1R37O75864 691 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 CYP3A5P20815 502 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms