RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 MICAL2O94851 1124 aa7.47□□□□□ -1.21
HDAC3-206ENST00000471968 C22orf31O95567 290 aa7.47□□□□□ -1.21
HDAC3-206ENST00000471968 LRG1P02750 347 aa7.47□□□□□ -1.21
HDAC3-206ENST00000471968 ITGB2P05107 769 aa7.47□□□□□ -1.21
HDAC3-206ENST00000471968 GNAT2P19087 354 aa7.47□□□□□ -1.21
HDAC3-206ENST00000471968 AFMP43652 599 aa7.47□□□□□ -1.21
HDAC3-206ENST00000471968 FOXK1P85037 733 aa7.47□□□□□ -1.21
HDAC3-206ENST00000471968 TARDBPQ13148 414 aaKnown RBP eCLIP7.47□□□□□ -1.21
HDAC3-206ENST00000471968 PSMD2Q13200 908 aa7.47□□□□□ -1.21
HDAC3-206ENST00000471968 ITPRIPL2Q3MIP1 535 aa7.47□□□□□ -1.21
HDAC3-206ENST00000471968 ARHGAP29Q52LW3 1261 aa7.47□□□□□ -1.21
HDAC3-206ENST00000471968 SPDYCQ5MJ68 293 aa7.47□□□□□ -1.21
HDAC3-206ENST00000471968 CEP57Q86XR8 500 aa7.47□□□□□ -1.21
HDAC3-206ENST00000471968 SAMD3Q8N6K7 520 aa7.47□□□□□ -1.21
HDAC3-206ENST00000471968 OLIG1Q8TAK6 271 aa7.47□□□□□ -1.21
HDAC3-206ENST00000471968 RABGGTAQ92696 567 aa7.47□□□□□ -1.21
HDAC3-206ENST00000471968 MAP7D2Q96T17 732 aa7.47□□□□□ -1.21
HDAC3-206ENST00000471968 REPIN1Q9BWE0 567 aaKnown RBP7.47□□□□□ -1.21
HDAC3-206ENST00000471968 COLEC11Q9BWP8 271 aa7.47□□□□□ -1.21
HDAC3-206ENST00000471968 NACAP1Q9BZK3 213 aa7.47□□□□□ -1.21
HDAC3-206ENST00000471968 NAPBQ9H115 298 aa7.47□□□□□ -1.21
HDAC3-206ENST00000471968 JMJD4Q9H9V9 463 aa7.47□□□□□ -1.21
HDAC3-206ENST00000471968 IL21RQ9HBE5 538 aa7.47□□□□□ -1.21
HDAC3-206ENST00000471968 FBRSL1Q9HCM7 1045 aaKnown RBP7.47□□□□□ -1.21
HDAC3-206ENST00000471968 JPH1Q9HDC5 661 aaPredicted RBP7.47□□□□□ -1.21
HDAC3-206ENST00000471968 PIN4Q9Y237 131 aaKnown RBP7.47□□□□□ -1.21
HDAC3-206ENST00000471968 NBEAL1Q6ZS30 2694 aa7.47□□□□□ -1.21
HDAC3-206ENST00000471968 CSMD2Q7Z408 3487 aa7.47□□□□□ -1.21
HDAC3-206ENST00000471968 COL1A2P08123 1366 aa7.46□□□□□ -1.21
HDAC3-206ENST00000471968 ANKHD1Q8IWZ3 2542 aaKnown RBP7.46□□□□□ -1.21
HDAC3-206ENST00000471968 TRDMT1O14717 391 aaKnown RBP7.46□□□□□ -1.22
HDAC3-206ENST00000471968 KLK10O43240 276 aa7.46□□□□□ -1.22
HDAC3-206ENST00000471968 TNFSF14O43557 240 aa7.46□□□□□ -1.22
HDAC3-206ENST00000471968 PPP1R11O60927 126 aaPredicted RBP7.46□□□□□ -1.22
HDAC3-206ENST00000471968 ZNF623O75123 536 aa7.46□□□□□ -1.22
HDAC3-206ENST00000471968 ITGB6P18564 788 aa7.46□□□□□ -1.22
HDAC3-206ENST00000471968 U2AF2P26368 475 aaKnown RBP eCLIP7.46□□□□□ -1.22
HDAC3-206ENST00000471968 RAB27AP51159 221 aa7.46□□□□□ -1.22
HDAC3-206ENST00000471968 PCBP4P57723 403 aaKnown RBP7.46□□□□□ -1.22
HDAC3-206ENST00000471968 PTH1RQ03431 593 aa7.46□□□□□ -1.22
HDAC3-206ENST00000471968 GRIK2Q13002 908 aa7.46□□□□□ -1.22
HDAC3-206ENST00000471968 ZNF484Q5JVG2 852 aa7.46□□□□□ -1.22
HDAC3-206ENST00000471968 CYP4A22Q5TCH4 519 aa7.46□□□□□ -1.22
HDAC3-206ENST00000471968 PCNX4Q63HM2 1172 aa7.46□□□□□ -1.22
HDAC3-206ENST00000471968 USP49Q70CQ1 688 aa7.46□□□□□ -1.22
HDAC3-206ENST00000471968 LNX1Q8TBB1 728 aaPredicted RBP7.46□□□□□ -1.22
HDAC3-206ENST00000471968 NLRP7Q8WX94 980 aa7.46□□□□□ -1.22
HDAC3-206ENST00000471968 CDHR1Q96JP9 859 aa7.46□□□□□ -1.22
HDAC3-206ENST00000471968 LRRC3BQ96PB8 259 aa7.46□□□□□ -1.22
HDAC3-206ENST00000471968 TOMM22Q9NS69 142 aa7.46□□□□□ -1.22
HDAC3-206ENST00000471968 SLC9A2Q9UBY0 812 aa7.46□□□□□ -1.22
HDAC3-206ENST00000471968 ADAM28Q9UKQ2 775 aa7.46□□□□□ -1.22
HDAC3-206ENST00000471968 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.46□□□□□ -1.22
HDAC3-206ENST00000471968 PCDHB2Q9Y5E7 798 aa7.46□□□□□ -1.22
HDAC3-206ENST00000471968 EVPLQ92817 2033 aa7.45□□□□□ -1.22
HDAC3-206ENST00000471968 A1L4Q6 167 aa7.45□□□□□ -1.22
HDAC3-206ENST00000471968 DPYSL4O14531 572 aa7.45□□□□□ -1.22
HDAC3-206ENST00000471968 FLRT2O43155 660 aa7.45□□□□□ -1.22
HDAC3-206ENST00000471968 AP5Z1O43299 807 aa7.45□□□□□ -1.22
HDAC3-206ENST00000471968 MOSPD3O75425 235 aa7.45□□□□□ -1.22
HDAC3-206ENST00000471968 TADA2AO75478 443 aa7.45□□□□□ -1.22
HDAC3-206ENST00000471968 MYL4P12829 197 aa7.45□□□□□ -1.22
HDAC3-206ENST00000471968 DRD1P21728 446 aa7.45□□□□□ -1.22
HDAC3-206ENST00000471968 COL8A1P27658 744 aa7.45□□□□□ -1.22
HDAC3-206ENST00000471968 OR1D2P34982 312 aa7.45□□□□□ -1.22
HDAC3-206ENST00000471968 DCTP40126 519 aa7.45□□□□□ -1.22
HDAC3-206ENST00000471968 SLC26A2P50443 739 aa7.45□□□□□ -1.22
HDAC3-206ENST00000471968 GPC3P51654 580 aa7.45□□□□□ -1.22
HDAC3-206ENST00000471968 ACTR2P61160 394 aa7.45□□□□□ -1.22
HDAC3-206ENST00000471968 CACNB1Q02641 598 aaPredicted RBP7.45□□□□□ -1.22
HDAC3-206ENST00000471968 RPL6Q02878 288 aaKnown RBP7.45□□□□□ -1.22
HDAC3-206ENST00000471968 ZNF33AQ06730 810 aa7.45□□□□□ -1.22
HDAC3-206ENST00000471968 RAB33AQ14088 237 aa7.45□□□□□ -1.22
HDAC3-206ENST00000471968 PTPAQ15257 358 aa7.45□□□□□ -1.22
HDAC3-206ENST00000471968 TEAD2Q15562 447 aa7.45□□□□□ -1.22
HDAC3-206ENST00000471968 PTPRNQ16849 979 aa7.45□□□□□ -1.22
HDAC3-206ENST00000471968 ALDH1L2Q3SY69 923 aa7.45□□□□□ -1.22
HDAC3-206ENST00000471968 FBXO43Q4G163 708 aa7.45□□□□□ -1.22
HDAC3-206ENST00000471968 NAIF1Q69YI7 327 aaPredicted RBP7.45□□□□□ -1.22
HDAC3-206ENST00000471968 RTL10Q7L3V2 364 aa7.45□□□□□ -1.22
HDAC3-206ENST00000471968 TRMT1LQ7Z2T5 733 aaKnown RBP7.45□□□□□ -1.22
HDAC3-206ENST00000471968 HS6ST3Q8IZP7 471 aa7.45□□□□□ -1.22
HDAC3-206ENST00000471968 LRRC71Q8N4P6 559 aa7.45□□□□□ -1.22
HDAC3-206ENST00000471968 GPRASP2Q96D09 838 aa7.45□□□□□ -1.22
HDAC3-206ENST00000471968 CHFRQ96EP1 664 aa7.45□□□□□ -1.22
HDAC3-206ENST00000471968 TTPALQ9BTX7 342 aa7.45□□□□□ -1.22
HDAC3-206ENST00000471968 LRRCC1Q9C099 1032 aa7.45□□□□□ -1.22
HDAC3-206ENST00000471968 TM7SF3Q9NS93 570 aa7.45□□□□□ -1.22
HDAC3-206ENST00000471968 BTBD3Q9Y2F9 522 aa7.45□□□□□ -1.22
HDAC3-206ENST00000471968 HELZP42694 1942 aaKnown RBP7.44□□□□□ -1.22
HDAC3-206ENST00000471968 A0A1W2PQD8 194 aa7.44□□□□□ -1.22
HDAC3-206ENST00000471968 TRIM6-TRIM34B2RNG4 842 aa7.44□□□□□ -1.22
HDAC3-206ENST00000471968 K7ENP7 123 aa7.44□□□□□ -1.22
HDAC3-206ENST00000471968 M0R2C6 588 aa7.44□□□□□ -1.22
HDAC3-206ENST00000471968 BACH1O14867 736 aa7.44□□□□□ -1.22
HDAC3-206ENST00000471968 GALK1P51570 392 aa7.44□□□□□ -1.22
HDAC3-206ENST00000471968 DSC1Q08554 894 aa7.44□□□□□ -1.22
HDAC3-206ENST00000471968 MTMR1Q13613 665 aa7.44□□□□□ -1.22
HDAC3-206ENST00000471968 MAP7D1Q3KQU3 841 aa7.44□□□□□ -1.22
HDAC3-206ENST00000471968 FAM171A1Q5VUB5 890 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms