RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 SDK1Q7Z5N4 2213 aa20.9■□□□□ 0.94
NCKIPSD-209ENST00000470006 BAHCC1Q9P281 2608 aa20.9■□□□□ 0.94
NCKIPSD-209ENST00000470006 ARHGEF37A1IGU5 675 aa20.9■□□□□ 0.94
NCKIPSD-209ENST00000470006 WDR27A2RRH5 827 aa20.9■□□□□ 0.94
NCKIPSD-209ENST00000470006 TTLL13PA6NNM8 815 aa20.9■□□□□ 0.94
NCKIPSD-209ENST00000470006 CHRNB1P11230 501 aa20.9■□□□□ 0.94
NCKIPSD-209ENST00000470006 XBP1P17861 261 aa20.9■□□□□ 0.94
NCKIPSD-209ENST00000470006 VIPR2P41587 438 aa20.9■□□□□ 0.94
NCKIPSD-209ENST00000470006 BRCC3P46736 316 aa20.9■□□□□ 0.94
NCKIPSD-209ENST00000470006 EVCP57679 992 aa20.9■□□□□ 0.94
NCKIPSD-209ENST00000470006 ROR1Q01973 937 aa20.9■□□□□ 0.94
NCKIPSD-209ENST00000470006 LRRC32Q14392 662 aa20.9■□□□□ 0.94
NCKIPSD-209ENST00000470006 N4BP2L1Q5TBK1 243 aaPredicted RBP20.9■□□□□ 0.94
NCKIPSD-209ENST00000470006 IQCEQ6IPM2 695 aa20.9■□□□□ 0.94
NCKIPSD-209ENST00000470006 VITQ6UXI7 678 aa20.9■□□□□ 0.94
NCKIPSD-209ENST00000470006 LONP2Q86WA8 852 aa20.9■□□□□ 0.94
NCKIPSD-209ENST00000470006 SKAP1Q86WV1 359 aa20.9■□□□□ 0.94
NCKIPSD-209ENST00000470006 MAP4K3Q8IVH8 894 aa20.9■□□□□ 0.94
NCKIPSD-209ENST00000470006 YAF2Q8IY57 180 aa20.9■□□□□ 0.94
NCKIPSD-209ENST00000470006 SPEM1Q8N4L4 309 aa20.9■□□□□ 0.94
NCKIPSD-209ENST00000470006 C12orf50Q8NA57 414 aaPredicted RBP20.9■□□□□ 0.94
NCKIPSD-209ENST00000470006 SMARCD2Q92925 531 aa20.9■□□□□ 0.94
NCKIPSD-209ENST00000470006 C2orf40Q9H1Z8 148 aa20.9■□□□□ 0.94
NCKIPSD-209ENST00000470006 FZD8Q9H461 694 aa20.9■□□□□ 0.94
NCKIPSD-209ENST00000470006 TMEM189-UBE2V1I3L0A0 370 aa20.89■□□□□ 0.93
NCKIPSD-209ENST00000470006 LYPLA2O95372 231 aa20.89■□□□□ 0.93
NCKIPSD-209ENST00000470006 PRKCBP05771 671 aa20.89■□□□□ 0.93
NCKIPSD-209ENST00000470006 MYL4P12829 197 aa20.89■□□□□ 0.93
NCKIPSD-209ENST00000470006 ATP2B1P20020 1258 aa20.89■□□□□ 0.93
NCKIPSD-209ENST00000470006 RBM25P49756 843 aaKnown RBP20.89■□□□□ 0.93
NCKIPSD-209ENST00000470006 KPNA1P52294 538 aaPredicted RBP20.89■□□□□ 0.93
NCKIPSD-209ENST00000470006 MAPK6Q16659 721 aa20.89■□□□□ 0.93
NCKIPSD-209ENST00000470006 FAM160A2Q8N612 972 aaPredicted RBP20.89■□□□□ 0.93
NCKIPSD-209ENST00000470006 DEPDC1BQ8WUY9 529 aa20.89■□□□□ 0.93
NCKIPSD-209ENST00000470006 ZNF512Q96ME7 567 aaPredicted RBP20.89■□□□□ 0.93
NCKIPSD-209ENST00000470006 ZSWIM3Q96MP5 696 aa20.89■□□□□ 0.93
NCKIPSD-209ENST00000470006 HSD17B14Q9BPX1 270 aa20.89■□□□□ 0.93
NCKIPSD-209ENST00000470006 SLITRK6Q9H5Y7 841 aa20.89■□□□□ 0.93
NCKIPSD-209ENST00000470006 TRPV5Q9NQA5 729 aa20.89■□□□□ 0.93
NCKIPSD-209ENST00000470006 TRIP11Q15643 1979 aa20.88■□□□□ 0.93
NCKIPSD-209ENST00000470006 NRG2O14511 850 aaPredicted RBP20.88■□□□□ 0.93
NCKIPSD-209ENST00000470006 AXIN1O15169 862 aa20.88■□□□□ 0.93
NCKIPSD-209ENST00000470006 CCR2P41597 374 aa20.88■□□□□ 0.93
NCKIPSD-209ENST00000470006 TOB2Q14106 344 aaPredicted RBP20.88■□□□□ 0.93
NCKIPSD-209ENST00000470006 FAM187BQ17R55 369 aa20.88■□□□□ 0.93
NCKIPSD-209ENST00000470006 FAM200AQ8TCP9 573 aa20.88■□□□□ 0.93
NCKIPSD-209ENST00000470006 OXER1Q8TDS5 423 aa20.88■□□□□ 0.93
NCKIPSD-209ENST00000470006 UROC1Q96N76 676 aa20.88■□□□□ 0.93
NCKIPSD-209ENST00000470006 GOLGA2P5Q9HBQ8 144 aa20.88■□□□□ 0.93
NCKIPSD-209ENST00000470006 RBM12Q9NTZ6 932 aaKnown RBP20.88■□□□□ 0.93
NCKIPSD-209ENST00000470006 INSL5Q9Y5Q6 135 aa20.88■□□□□ 0.93
NCKIPSD-209ENST00000470006 PDCD11Q14690 1871 aaKnown RBP20.88■□□□□ 0.93
NCKIPSD-209ENST00000470006 MICAL2O94851 1124 aa20.87■□□□□ 0.93
NCKIPSD-209ENST00000470006 ATF2P15336 505 aa20.87■□□□□ 0.93
NCKIPSD-209ENST00000470006 GJA1P17302 382 aa20.87■□□□□ 0.93
NCKIPSD-209ENST00000470006 GAS6Q14393 721 aa20.87■□□□□ 0.93
NCKIPSD-209ENST00000470006 CCDC6Q16204 474 aa20.87■□□□□ 0.93
NCKIPSD-209ENST00000470006 CALCRLQ16602 461 aa20.87■□□□□ 0.93
NCKIPSD-209ENST00000470006 UPP1Q16831 310 aa20.87■□□□□ 0.93
NCKIPSD-209ENST00000470006 EEF1DP3Q658K8 133 aa20.87■□□□□ 0.93
NCKIPSD-209ENST00000470006 CDCA2Q69YH5 1023 aaPredicted RBP20.87■□□□□ 0.93
NCKIPSD-209ENST00000470006 RUFY3Q7L099 469 aa20.87■□□□□ 0.93
NCKIPSD-209ENST00000470006 HS6ST3Q8IZP7 471 aa20.87■□□□□ 0.93
NCKIPSD-209ENST00000470006 MCPH1Q8NEM0 835 aa20.87■□□□□ 0.93
NCKIPSD-209ENST00000470006 DEPTORQ8TB45 409 aa20.87■□□□□ 0.93
NCKIPSD-209ENST00000470006 ZSCAN18Q8TBC5 510 aaPredicted RBP20.87■□□□□ 0.93
NCKIPSD-209ENST00000470006 ZNF274Q96GC6 653 aaPredicted RBP20.87■□□□□ 0.93
NCKIPSD-209ENST00000470006 TTC12Q9H892 705 aaPredicted RBP20.87■□□□□ 0.93
NCKIPSD-209ENST00000470006 ATRXP46100 2492 aa20.86■□□□□ 0.93
NCKIPSD-209ENST00000470006 FAM208BQ5VWN6 2430 aa20.86■□□□□ 0.93
NCKIPSD-209ENST00000470006 ABLIM3O94929 683 aa20.86■□□□□ 0.93
NCKIPSD-209ENST00000470006 SEC24AO95486 1093 aa20.86■□□□□ 0.93
NCKIPSD-209ENST00000470006 PMLP29590 882 aa20.86■□□□□ 0.93
NCKIPSD-209ENST00000470006 TXKP42681 527 aa20.86■□□□□ 0.93
NCKIPSD-209ENST00000470006 PTGDRQ13258 359 aa20.86■□□□□ 0.93
NCKIPSD-209ENST00000470006 SF3A2Q15428 464 aaKnown RBP20.86■□□□□ 0.93
NCKIPSD-209ENST00000470006 DCAF4L1Q3SXM0 396 aa20.86■□□□□ 0.93
NCKIPSD-209ENST00000470006 SLC8B1Q6J4K2 584 aa20.86■□□□□ 0.93
NCKIPSD-209ENST00000470006 MFSD6LQ8IWD5 586 aa20.86■□□□□ 0.93
NCKIPSD-209ENST00000470006 TCEAL8Q8IYN2 117 aa20.86■□□□□ 0.93
NCKIPSD-209ENST00000470006 C3orf58Q8NDZ4 430 aa20.86■□□□□ 0.93
NCKIPSD-209ENST00000470006 PPP1R10Q96QC0 940 aaKnown RBP20.86■□□□□ 0.93
NCKIPSD-209ENST00000470006 ARRDC1-AS1Q9H2J1 176 aa20.86■□□□□ 0.93
NCKIPSD-209ENST00000470006 GJB4Q9NTQ9 266 aa20.86■□□□□ 0.93
NCKIPSD-209ENST00000470006 CEP295Q9C0D2 2601 aa20.85■□□□□ 0.93
NCKIPSD-209ENST00000470006 SLC38A8A6NNN8 435 aa20.85■□□□□ 0.93
NCKIPSD-209ENST00000470006 HEPACAM2A8MVW5 462 aa20.85■□□□□ 0.93
NCKIPSD-209ENST00000470006 H7C4K7 107 aa20.85■□□□□ 0.93
NCKIPSD-209ENST00000470006 ACKR2O00590 384 aa20.85■□□□□ 0.93
NCKIPSD-209ENST00000470006 CDKL5O76039 1030 aa20.85■□□□□ 0.93
NCKIPSD-209ENST00000470006 CD300LGQ6UXG3 332 aa20.85■□□□□ 0.93
NCKIPSD-209ENST00000470006 ASAH2Q9NR71 780 aa20.85■□□□□ 0.93
NCKIPSD-209ENST00000470006 SH2B1Q9NRF2 756 aaPredicted RBP20.85■□□□□ 0.93
NCKIPSD-209ENST00000470006 CYP46A1Q9Y6A2 500 aa20.85■□□□□ 0.93
NCKIPSD-209ENST00000470006 COL4A2P08572 1712 aa20.84■□□□□ 0.93
NCKIPSD-209ENST00000470006 FAM205CA6NFA0 338 aa20.84■□□□□ 0.93
NCKIPSD-209ENST00000470006 K7ESF4 209 aa20.84■□□□□ 0.93
NCKIPSD-209ENST00000470006 XRCC6P12956 609 aaKnown RBP eCLIP20.84■□□□□ 0.93
NCKIPSD-209ENST00000470006 SOX9P48436 509 aa20.84■□□□□ 0.93
NCKIPSD-209ENST00000470006 YARSP54577 528 aaKnown RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms