RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 LCA5Q86VQ0 697 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 FBXO16Q8IX29 292 aaPredicted RBP13.12□□□□□ -0.31
USP11-206ENST00000469080 CCDC105Q8IYK2 499 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 DAW1Q8N136 415 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 TEX13BQ9BXU2 312 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 SYNCQ9H7C4 482 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 ACAD9Q9H845 621 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 ZNF536O15090 1300 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 DDX3XO00571 662 aaKnown RBP eCLIP13.12□□□□□ -0.31
USP11-206ENST00000469080 GLI1P08151 1106 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 ZCWPW2Q504Y3 356 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 TMEM270Q6UE05 265 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 CLEC4DQ8WXI8 215 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 ATP6V0A1Q93050 837 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 SYT15Q9BQS2 421 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 FAM49AQ9H0Q0 323 aaPredicted RBP13.12□□□□□ -0.31
USP11-206ENST00000469080 ATP8A1Q9Y2Q0 1164 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 SNX24Q9Y343 169 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 PCDHB4Q9Y5E5 795 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 GRID2IPA4D2P6 1211 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 DNAJC8O75937 253 aaPredicted RBP13.11□□□□□ -0.31
USP11-206ENST00000469080 MMEP08473 750 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 FAM153BP0C7A2 387 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 ATP2A2P16615 1042 aaKnown RBP13.11□□□□□ -0.31
USP11-206ENST00000469080 SOX5P35711 763 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 SESN3P58005 492 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 VGLL4Q14135 290 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 EDRF1Q3B7T1 1238 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 SUPT20HL1Q3ZLR7 823 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 FAM153CQ494X1 144 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 FAM83AQ86UY5 434 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 SESTD1Q86VW0 696 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 L3MBTL3Q96JM7 780 aaPredicted RBP13.11□□□□□ -0.31
USP11-206ENST00000469080 C11orf70Q9BRQ4 267 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 FHDC1Q9C0D6 1143 aaPredicted RBP13.11□□□□□ -0.31
USP11-206ENST00000469080 BRD8Q9H0E9 1235 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 ATXN10Q9UBB4 475 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 FAM153AQ9UHL3 310 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 PLIN4Q96Q06 1357 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 CYP3A7-CYP3A51PA0A087WV96 503 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 PHF20L1A8MW92 1017 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 SMAPO00193 183 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 TTI1O43156 1089 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 DAPK3O43293 454 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 ADRB2P07550 413 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 CYP3A7P24462 503 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 NT5C2P49902 561 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 BPIFB4P59827 614 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 P3H1Q32P28 736 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 TMEM63BQ5T3F8 832 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 RASIP1Q5U651 963 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 MAP1SQ66K74 1059 aaPredicted RBP13.11□□□□□ -0.31
USP11-206ENST00000469080 ANO5Q75V66 913 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 BSNDQ8WZ55 320 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 MSTO1Q9BUK6 570 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 MTFR1LQ9H019 292 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 CHMP2BQ9UQN3 213 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 PCDHA2Q9Y5H9 948 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 CDK5RAP2Q96SN8 1893 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 ZNF862O60290 1169 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 TNNC1P63316 161 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 SMAD1Q15797 465 aaKnown RBP13.11□□□□□ -0.31
USP11-206ENST00000469080 STXBP2Q15833 593 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 NT5C1BQ96P26 610 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 TBC1D22BQ9NU19 505 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 APEX2Q9UBZ4 518 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 PHF24Q9UPV7 400 aa13.11□□□□□ -0.31
USP11-206ENST00000469080 PI4K2BG5E9Z4 385 aa13.1□□□□□ -0.31
USP11-206ENST00000469080 RAD51CO43502 376 aa13.1□□□□□ -0.31
USP11-206ENST00000469080 PSAPP07602 524 aa13.1□□□□□ -0.31
USP11-206ENST00000469080 ATF7P17544 494 aaPredicted RBP13.1□□□□□ -0.31
USP11-206ENST00000469080 DYNLT1P63172 113 aa13.1□□□□□ -0.31
USP11-206ENST00000469080 ZBTB41Q5SVQ8 909 aa13.1□□□□□ -0.31
USP11-206ENST00000469080 ALS2CLQ60I27 953 aa13.1□□□□□ -0.31
USP11-206ENST00000469080 BTNL9Q6UXG8 535 aa13.1□□□□□ -0.31
USP11-206ENST00000469080 PPP4R3CPQ6ZMV5 832 aa13.1□□□□□ -0.31
USP11-206ENST00000469080 CREG2Q8IUH2 290 aa13.1□□□□□ -0.31
USP11-206ENST00000469080 TEX9Q8N6V9 391 aa13.1□□□□□ -0.31
USP11-206ENST00000469080 RNF149Q8NC42 400 aa13.1□□□□□ -0.31
USP11-206ENST00000469080 DHRS1Q96LJ7 313 aa13.1□□□□□ -0.31
USP11-206ENST00000469080 VCXQ9H320 206 aa13.1□□□□□ -0.31
USP11-206ENST00000469080 ZNF302Q9NR11 478 aa13.1□□□□□ -0.31
USP11-206ENST00000469080 TARSL2A2RTX5 802 aaKnown RBP13.1□□□□□ -0.31
USP11-206ENST00000469080 IFNB1P01574 187 aa13.1□□□□□ -0.31
USP11-206ENST00000469080 PLS3P13797 630 aa13.1□□□□□ -0.31
USP11-206ENST00000469080 CCND1P24385 295 aa13.1□□□□□ -0.31
USP11-206ENST00000469080 MARCKSL1P49006 195 aa13.1□□□□□ -0.31
USP11-206ENST00000469080 USP46P62068 366 aa13.1□□□□□ -0.31
USP11-206ENST00000469080 MRPS35P82673 323 aaKnown RBP13.1□□□□□ -0.31
USP11-206ENST00000469080 LPAR1Q92633 364 aa13.1□□□□□ -0.31
USP11-206ENST00000469080 C1orf112Q9NSG2 853 aa13.1□□□□□ -0.31
USP11-206ENST00000469080 FBXO40Q9UH90 709 aa13.1□□□□□ -0.31
USP11-206ENST00000469080 GGA2Q9UJY4 613 aa13.1□□□□□ -0.31
USP11-206ENST00000469080 WEE2P0C1S8 567 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 FGFR4P22455 802 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 CIITAP33076 1130 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 CLCN3P51790 818 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 HIRAP54198 1017 aaPredicted RBP13.09□□□□□ -0.31
USP11-206ENST00000469080 IFI16Q16666 785 aaKnown RBP13.09□□□□□ -0.31
USP11-206ENST00000469080 ANO7Q6IWH7 933 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms