RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 CCDC33Q8N5R6 958 aa5.29□□□□□ -1.56
EPHA3-202ENST00000452448 USHBP1Q8N6Y0 703 aa5.29□□□□□ -1.56
EPHA3-202ENST00000452448 CCNYL1Q8N7R7 359 aa5.29□□□□□ -1.56
EPHA3-202ENST00000452448 LILRB4Q8NHJ6 448 aa5.29□□□□□ -1.56
EPHA3-202ENST00000452448 MYCBPAPQ8TBZ2 947 aa5.29□□□□□ -1.56
EPHA3-202ENST00000452448 ABTB1Q969K4 478 aaPredicted RBP5.29□□□□□ -1.56
EPHA3-202ENST00000452448 MFSD3Q96ES6 412 aa5.29□□□□□ -1.56
EPHA3-202ENST00000452448 ZNF845Q96IR2 970 aaPredicted RBP5.29□□□□□ -1.56
EPHA3-202ENST00000452448 GAS2L1Q99501 681 aaPredicted RBP5.29□□□□□ -1.56
EPHA3-202ENST00000452448 NUDT16L1Q9BRJ7 211 aaKnown RBP5.29□□□□□ -1.56
EPHA3-202ENST00000452448 HAUS8Q9BT25 410 aa5.29□□□□□ -1.56
EPHA3-202ENST00000452448 STMN4Q9H169 189 aaPredicted RBP5.29□□□□□ -1.56
EPHA3-202ENST00000452448 TNKS2Q9H2K2 1166 aa5.29□□□□□ -1.56
EPHA3-202ENST00000452448 IFT22Q9H7X7 185 aa5.29□□□□□ -1.56
EPHA3-202ENST00000452448 MRM3Q9HC36 420 aaKnown RBP5.29□□□□□ -1.56
EPHA3-202ENST00000452448 PRKAG3Q9UGI9 489 aa5.29□□□□□ -1.56
EPHA3-202ENST00000452448 ANAPC5Q9UJX4 755 aa5.29□□□□□ -1.56
EPHA3-202ENST00000452448 DMTF1Q9Y222 760 aa5.29□□□□□ -1.56
EPHA3-202ENST00000452448 RWDD3Q9Y3V2 267 aa5.29□□□□□ -1.56
EPHA3-202ENST00000452448 ARHGAP31Q2M1Z3 1444 aa5.29□□□□□ -1.56
EPHA3-202ENST00000452448 SPHKAPQ2M3C7 1700 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 MACROD2A1Z1Q3 448 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 VWA3AA6NCI4 1184 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 GOLGA8SH3BPF8 625 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 H3BQF6 201 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 FLOT1O75955 427 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 SASH3O75995 380 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 GLRX3O76003 335 aaKnown RBP5.28□□□□□ -1.56
EPHA3-202ENST00000452448 APOA4P06727 396 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 WEE2P0C1S8 567 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 MYL4P12829 197 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 SELLP14151 372 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 XPAP23025 273 aaPredicted RBP5.28□□□□□ -1.56
EPHA3-202ENST00000452448 SFPQP23246 707 aaKnown RBP eCLIP5.28□□□□□ -1.56
EPHA3-202ENST00000452448 PCP4P48539 62 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 DGKGP49619 791 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 ATP1A2P50993 1020 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 MLLT6P55198 1093 aaPredicted RBP5.28□□□□□ -1.56
EPHA3-202ENST00000452448 TRIM32Q13049 653 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 CUL2Q13617 745 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 CLUL1Q15846 466 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 KLHL38Q2WGJ6 581 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 MINDY4Q4G0A6 757 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 ATP13A4Q4VNC1 1196 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 ZBTB41Q5SVQ8 909 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 CLVS2Q5SYC1 327 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 KCTD16Q68DU8 428 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 DUS1LQ6P1R4 473 aaKnown RBP5.28□□□□□ -1.56
EPHA3-202ENST00000452448 TRAF7Q6Q0C0 670 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 ENOSF1Q7L5Y1 443 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 ERMP1Q7Z2K6 904 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 NUP54Q7Z3B4 507 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 SCUBE1Q8IWY4 988 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 FAM169BQ8N8A8 192 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 OR7G1Q8NGA0 311 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 OR6P1Q8NGX9 317 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 HIC2Q96JB3 615 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 AIFM3Q96NN9 605 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 COQ7Q99807 217 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 CCDC77Q9BR77 488 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 HGH1Q9BTY7 390 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 KIAA1586Q9HCI6 787 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 VCX3AQ9NNX9 186 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 HPF1Q9NWY4 346 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 IL37Q9NZH6 218 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 SOX13Q9UN79 622 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 COG5Q9UP83 839 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 GIT1Q9Y2X7 761 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 L3MBTL1Q9Y468 752 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 PCDHB9Q9Y5E1 797 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 WDR19Q8NEZ3 1342 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 POLR3AO14802 1390 aaPredicted RBP5.28□□□□□ -1.56
EPHA3-202ENST00000452448 DIP2CQ9Y2E4 1556 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 ALKQ9UM73 1620 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 SIGLEC1Q9BZZ2 1709 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 KDM5AP29375 1690 aaKnown RBP5.28□□□□□ -1.56
EPHA3-202ENST00000452448 NPHP4O75161 1426 aaPredicted RBP5.28□□□□□ -1.56
EPHA3-202ENST00000452448 ZNF804BA4D1E1 1349 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 TTC41PQ6P2S7 1318 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 CCDC151A5D8V7 595 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 C16orf96A6NNT2 1141 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 MEFVO15553 781 aaPredicted RBP5.28□□□□□ -1.56
EPHA3-202ENST00000452448 HNRNPRO43390 633 aaKnown RBP5.28□□□□□ -1.56
EPHA3-202ENST00000452448 IDH3BO43837 385 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 BUB1BO60566 1050 aaPredicted RBP5.28□□□□□ -1.56
EPHA3-202ENST00000452448 PTCD1O75127 700 aaKnown RBP5.28□□□□□ -1.56
EPHA3-202ENST00000452448 ZC3H11AO75152 810 aaKnown RBP eCLIP5.28□□□□□ -1.56
EPHA3-202ENST00000452448 ECDO95905 644 aaPredicted RBP5.28□□□□□ -1.56
EPHA3-202ENST00000452448 KRT1P04264 644 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 DLATP10515 647 aaKnown RBP5.28□□□□□ -1.56
EPHA3-202ENST00000452448 RARBP10826 455 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 P4HA1P13674 534 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 ACAT1P24752 427 aaKnown RBP5.28□□□□□ -1.56
EPHA3-202ENST00000452448 DDIT3P35638 169 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 KRT2P35908 639 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 PPARGP37231 505 aaPredicted RBP5.28□□□□□ -1.56
EPHA3-202ENST00000452448 STAT6P42226 847 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 OR1G1P47890 313 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 RPIAP49247 311 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 HDGFP51858 240 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms