RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 CCDC17Q96LX7 622 aa18.24■□□□□ 0.51
SCUBE2-202ENST00000450649 FAM20AQ96MK3 541 aa18.24■□□□□ 0.51
SCUBE2-202ENST00000450649 NUMBLQ9Y6R0 609 aa18.24■□□□□ 0.51
SCUBE2-202ENST00000450649 CAPN9O14815 690 aa18.24■□□□□ 0.51
SCUBE2-202ENST00000450649 GAS8O95995 478 aa18.24■□□□□ 0.51
SCUBE2-202ENST00000450649 CTC1Q2NKJ3 1217 aa18.24■□□□□ 0.51
SCUBE2-202ENST00000450649 ACSBG2Q5FVE4 666 aa18.24■□□□□ 0.51
SCUBE2-202ENST00000450649 SYDE1Q6ZW31 735 aaPredicted RBP18.24■□□□□ 0.51
SCUBE2-202ENST00000450649 MYCT1Q8N699 235 aa18.24■□□□□ 0.51
SCUBE2-202ENST00000450649 CFAP61Q8NHU2 1237 aa18.24■□□□□ 0.51
SCUBE2-202ENST00000450649 RBM41Q96IZ5 413 aaKnown RBP18.24■□□□□ 0.51
SCUBE2-202ENST00000450649 P2RX7Q99572 595 aaKnown RBP18.24■□□□□ 0.51
SCUBE2-202ENST00000450649 TIPINQ9BVW5 301 aa18.24■□□□□ 0.51
SCUBE2-202ENST00000450649 UBN1Q9NPG3 1134 aa18.24■□□□□ 0.51
SCUBE2-202ENST00000450649 SAR1AQ9NR31 198 aa18.24■□□□□ 0.51
SCUBE2-202ENST00000450649 MAGEA13PA6NCF6 341 aa18.23■□□□□ 0.51
SCUBE2-202ENST00000450649 C6orf229H3BNL8 230 aa18.23■□□□□ 0.51
SCUBE2-202ENST00000450649 EIF3DO15371 548 aaKnown RBP eCLIP18.23■□□□□ 0.51
SCUBE2-202ENST00000450649 KPNB1Q14974 876 aaKnown RBP18.23■□□□□ 0.51
SCUBE2-202ENST00000450649 NSMFQ6X4W1 530 aa18.23■□□□□ 0.51
SCUBE2-202ENST00000450649 OTOAQ7RTW8 1153 aa18.23■□□□□ 0.51
SCUBE2-202ENST00000450649 CLNKQ7Z7G1 428 aa18.23■□□□□ 0.51
SCUBE2-202ENST00000450649 ARHGEF19Q8IW93 802 aa18.23■□□□□ 0.51
SCUBE2-202ENST00000450649 RIBC1Q8N443 379 aaPredicted RBP18.23■□□□□ 0.51
SCUBE2-202ENST00000450649 RDH13Q8NBN7 331 aa18.23■□□□□ 0.51
SCUBE2-202ENST00000450649 GATA6Q92908 595 aa18.23■□□□□ 0.51
SCUBE2-202ENST00000450649 FAM210AQ96ND0 272 aa18.23■□□□□ 0.51
SCUBE2-202ENST00000450649 TRABDQ9H4I3 376 aa18.23■□□□□ 0.51
SCUBE2-202ENST00000450649 PRPF4O43172 522 aaKnown RBP eCLIP18.23■□□□□ 0.51
SCUBE2-202ENST00000450649 HLA-DOAP06340 250 aa18.23■□□□□ 0.51
SCUBE2-202ENST00000450649 RRM1P23921 792 aa18.23■□□□□ 0.51
SCUBE2-202ENST00000450649 RPA3P35244 121 aaPredicted RBP18.23■□□□□ 0.51
SCUBE2-202ENST00000450649 SLC34A1Q06495 639 aa18.23■□□□□ 0.51
SCUBE2-202ENST00000450649 DYNC1I2Q13409 638 aaKnown RBP18.23■□□□□ 0.51
SCUBE2-202ENST00000450649 NFIL3Q16649 462 aa18.23■□□□□ 0.51
SCUBE2-202ENST00000450649 DCAF4Q8WV16 495 aa18.23■□□□□ 0.51
SCUBE2-202ENST00000450649 MAIP1Q8WWC4 291 aa18.23■□□□□ 0.51
SCUBE2-202ENST00000450649 GREB1LQ9C091 1923 aaPredicted RBP18.23■□□□□ 0.51
SCUBE2-202ENST00000450649 NPHS2Q9NP85 383 aa18.23■□□□□ 0.51
SCUBE2-202ENST00000450649 RABGAP1Q9Y3P9 1069 aa18.23■□□□□ 0.51
SCUBE2-202ENST00000450649 BTAF1O14981 1849 aa18.23■□□□□ 0.51
SCUBE2-202ENST00000450649 TULP1O00294 542 aaPredicted RBP18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 C2CD2LO14523 706 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 TBX10O75333 385 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 FAM13AO94988 1023 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 SGPL1O95470 568 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 RFX1P22670 979 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 SERPINB4P48594 390 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 C4orf33Q8N1A6 199 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 KCTD17Q8N5Z5 321 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 MKL1Q969V6 931 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 PLVAPQ9BX97 442 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 CYLDQ9NQC7 956 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 EXOC1LA0A1B0GW35 172 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 HNRNPCL1O60812 293 aaKnown RBP18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 GAP43P17677 238 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 GCAP28676 217 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 RANBP1P43487 201 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 SLC1A5Q15758 541 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 RINT1Q6NUQ1 792 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 DTX3LQ8TDB6 740 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 GRK7Q8WTQ7 553 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 GBP5Q96PP8 586 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 HERPUD2Q9BSE4 406 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 POLR3CQ9BUI4 534 aaPredicted RBP18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 KIAA1586Q9HCI6 787 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 FAM86B1E9PN63 330 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 CCDC22O60826 627 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 FAM86B2P0C5J1 330 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 FGFR1P11362 822 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 SREBF1P36956 1147 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 NR1H3Q13133 447 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 ZRSR2Q15696 482 aaKnown RBP18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 SLC15A2Q16348 729 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 PKN2Q16513 984 aaKnown RBP18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 ZC3H12AQ5D1E8 599 aaKnown RBP18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 HS2ST1Q7LGA3 356 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 ZNF653Q96CK0 615 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 DCLK3Q9C098 648 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 AGPAT3Q9NRZ7 376 aa18.22■□□□□ 0.51
SCUBE2-202ENST00000450649 PSMG1O95456 288 aa18.21■□□□□ 0.51
SCUBE2-202ENST00000450649 FOSP01100 380 aaPredicted RBP18.21■□□□□ 0.51
SCUBE2-202ENST00000450649 CA4P22748 312 aa18.21■□□□□ 0.51
SCUBE2-202ENST00000450649 MAN1A1P33908 653 aa18.21■□□□□ 0.51
SCUBE2-202ENST00000450649 BFSP1Q12934 665 aa18.21■□□□□ 0.51
SCUBE2-202ENST00000450649 PLEKHG4Q58EX7 1191 aa18.21■□□□□ 0.51
SCUBE2-202ENST00000450649 NOP9Q86U38 636 aaKnown RBP18.21■□□□□ 0.51
SCUBE2-202ENST00000450649 PPFIBP2Q8ND30 876 aa18.21■□□□□ 0.51
SCUBE2-202ENST00000450649 FAM81AQ8TBF8 368 aa18.21■□□□□ 0.51
SCUBE2-202ENST00000450649 BTBD10Q9BSF8 475 aa18.21■□□□□ 0.51
SCUBE2-202ENST00000450649 ACP6Q9NPH0 428 aa18.21■□□□□ 0.51
SCUBE2-202ENST00000450649 LRRC4BQ9NT99 713 aa18.21■□□□□ 0.51
SCUBE2-202ENST00000450649 DMAC2Q9NW81 257 aa18.21■□□□□ 0.51
SCUBE2-202ENST00000450649 VAV3Q9UKW4 847 aa18.21■□□□□ 0.51
SCUBE2-202ENST00000450649 POC1B-GALNT4F8VUJ3 575 aa18.21■□□□□ 0.51
SCUBE2-202ENST00000450649 GSC2O15499 205 aa18.21■□□□□ 0.51
SCUBE2-202ENST00000450649 CYP1A2P05177 515 aa18.21■□□□□ 0.51
SCUBE2-202ENST00000450649 KRT15P19012 456 aa18.21■□□□□ 0.51
SCUBE2-202ENST00000450649 GSTT1P30711 240 aa18.21■□□□□ 0.51
SCUBE2-202ENST00000450649 CIITAP33076 1130 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms