RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 CKMP06732 381 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 HSPA8P11142 646 aaKnown RBP3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 UBL4AP11441 157 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 TRIM27P14373 513 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 FSTP19883 344 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 ATP6V1C1P21283 382 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 S100A1P23297 94 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 CCNCP24863 283 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 LSP1P33241 339 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 MLH1P40692 756 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 ACADSBP45954 432 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 CLCN2P51788 898 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 USP14P54578 494 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 GPR85P60893 370 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 GNGT1P63211 74 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 TUBA1BP68363 451 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 PDE1BQ01064 536 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 APBA1Q02410 837 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 ITIH3Q06033 890 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 HSPA14Q0VDF9 509 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 TBX2Q13207 712 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 COG2Q14746 738 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 DDB1Q16531 1140 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 STX1AQ16623 288 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 PTGISQ16647 500 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 IFI16Q16666 785 aaKnown RBP3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 NDUFA5Q16718 116 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 DPY19L1Q2PZI1 675 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 INAVAQ3KP66 663 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 ANKRD20A2Q5SQ80 823 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 ANKRD20A1Q5TYW2 823 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 ANKRD20A3Q5VUR7 823 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 PPP4R3AQ6IN85 833 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 CDPF1Q6NVV7 123 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 IRGCQ6NXR0 463 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 DUS1LQ6P1R4 473 aaKnown RBP3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 SLC2A7Q6PXP3 512 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 LVRNQ6Q4G3 990 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 SEZ6L2Q6UXD5 910 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 CD109Q6YHK3 1445 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 TUBA1AQ71U36 451 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 FKBP9P1Q75LS8 142 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 ZNF572Q7Z3I7 529 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 NANOGNBQ7Z5D8 188 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 ANKARQ7Z5J8 1434 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 TMC3Q7Z5M5 1100 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 UBE2Q1Q7Z7E8 422 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 DRC7Q8IY82 874 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 IFNL3Q8IZI9 196 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 CBARPQ8N350 705 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 TMEM130Q8N3G9 435 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 MAGEB6Q8N7X4 407 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 PDILTQ8N807 584 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 MYCBPAPQ8TBZ2 947 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 DQX1Q8TE96 717 aaKnown RBP3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 ATP8B4Q8TF62 1192 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 FRS2Q8WU20 508 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 JPH3Q8WXH2 748 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 DHX58Q96C10 678 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 ABHD8Q96I13 439 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 HGH1Q9BTY7 390 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 DSCC1Q9BVC3 393 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 SEMA6CQ9H3T2 930 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 VCX3AQ9NNX9 186 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 CHST12Q9NRB3 414 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 CHST7Q9NS84 486 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 HAUS2Q9NVX0 235 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 ZNHIT6Q9NWK9 470 aaKnown RBP3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 RMND1Q9NWS8 449 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 ATP10DQ9P241 1426 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 SUCLA2Q9P2R7 463 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 SEL1LQ9UBV2 794 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 PCSK1NQ9UHG2 260 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 ACAD8Q9UKU7 415 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 NOB1Q9ULX3 412 aaKnown RBP3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 RIMS2Q9UQ26 1411 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 MTMR6Q9Y217 621 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 TRAPPC8Q9Y2L5 1435 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 PPP2R2CQ9Y2T4 447 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 PCDHA8Q9Y5H6 950 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 FADS3Q9Y5Q0 445 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 ST14Q9Y5Y6 855 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 IQGAP3Q86VI3 1631 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 MADDQ8WXG6 1647 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 NEO1Q92859 1461 aa3.91□□□□□ -1.78
HMGB3P8-201ENST00000449709 ARHGEF40Q8TER5 1519 aa3.9□□□□□ -1.78
HMGB3P8-201ENST00000449709 LRRC7Q96NW7 1537 aa3.9□□□□□ -1.78
HMGB3P8-201ENST00000449709 ABCC12Q96J65 1359 aa3.9□□□□□ -1.78
HMGB3P8-201ENST00000449709 SPHKAPQ2M3C7 1700 aa3.9□□□□□ -1.78
HMGB3P8-201ENST00000449709 ADGRB1O14514 1584 aa3.9□□□□□ -1.78
HMGB3P8-201ENST00000449709 A0A0J9YVX5 310 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 TRIM43BA6NCK2 446 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 SIGLEC16A6NMB1 481 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 BECN2A8MW95 431 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 ERVV-2B6SEH9 535 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 KIF28PB7ZC32 967 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 FZD9O00144 591 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 STX10O60499 249 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 MSCO60682 206 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 SERPINB7O75635 380 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms