RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 CYP3A7P24462 503 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 ABCD1P33897 745 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 AMPD2Q01433 879 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 MXD4Q14582 209 aaPredicted RBP11.24□□□□□ -0.61
TOP3B-210ENST00000444502 CBWD6Q4V339 395 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 PPP6R3Q5H9R7 873 aaPredicted RBP11.24□□□□□ -0.61
TOP3B-210ENST00000444502 CBWD3Q5JTY5 395 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 CBWD5Q5RIA9 395 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 C1orf186Q6ZWK4 172 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 ARMCX2Q7L311 632 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 KCNV2Q8TDN2 545 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 BTBD6Q96KE9 485 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 ACAP3Q96P50 834 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 ZIM3Q96PE6 472 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 MIS12Q9H081 205 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 SAMD15Q9P1V8 674 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 RIPK3Q9Y572 518 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 ADAMTS7Q9UKP4 1686 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 H3BRB1 525 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 SLC26A4O43511 780 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 PSMD10O75832 226 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 KCNJ1P48048 391 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 CLK2P49760 499 aaKnown RBP11.24□□□□□ -0.61
TOP3B-210ENST00000444502 RARRES1P49788 294 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 ADCY2Q08462 1091 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 PCNX4Q63HM2 1172 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 CYP4F22Q6NT55 531 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 CYB5D1Q6P9G0 228 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 C1orf54Q8WWF1 131 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 FAXDC2Q96IV6 333 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 TUT1Q9H6E5 874 aaKnown RBP11.24□□□□□ -0.61
TOP3B-210ENST00000444502 AGO4Q9HCK5 861 aaKnown RBP11.24□□□□□ -0.61
TOP3B-210ENST00000444502 SETD4Q9NVD3 440 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 AIPL1Q9NZN9 384 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 H7C0C1 242 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 ACSL3O95573 720 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 ECEL1O95672 775 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 SUPT20HL2P0C7V6 817 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 ADORA2BP29275 332 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 ATP5OP48047 213 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 ITKQ08881 620 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 CUL1Q13616 776 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 RRP1BQ14684 758 aaKnown RBP11.24□□□□□ -0.61
TOP3B-210ENST00000444502 CATSPERGQ6ZRH7 1159 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 BEST2Q8NFU1 509 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 CPA5Q8WXQ8 436 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 SLC5A5Q92911 643 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 TSNARE1Q96NA8 513 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 ZWILCHQ9H900 591 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 VPS37BQ9H9H4 285 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 ACP6Q9NPH0 428 aa11.24□□□□□ -0.61
TOP3B-210ENST00000444502 CASZ1Q86V15 1759 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 CICQ96RK0 1608 aaPredicted RBP11.23□□□□□ -0.61
TOP3B-210ENST00000444502 SPDYE16A6NNV3 312 aaPredicted RBP11.23□□□□□ -0.61
TOP3B-210ENST00000444502 A8MXQ7 604 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 KBTBD13C9JR72 458 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 TLR2O60603 784 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 SGPL1O95470 568 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 ITGB5P18084 799 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 ALDH5A1P51649 535 aaPredicted RBP11.23□□□□□ -0.61
TOP3B-210ENST00000444502 XRRA1Q6P2D8 792 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 CACNA2D3Q8IZS8 1091 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 ANKS4BQ8N8V4 417 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 RNF25Q96BH1 459 aaPredicted RBP11.23□□□□□ -0.61
TOP3B-210ENST00000444502 FAM84AQ96KN4 292 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 NKIRAS1Q9NYS0 192 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 TBK1Q9UHD2 729 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 DDX20Q9UHI6 824 aaKnown RBP11.23□□□□□ -0.61
TOP3B-210ENST00000444502 MYH7P12883 1935 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 A6NJR5 290 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 TTC36A6NLP5 189 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 DDX3XO00571 662 aaKnown RBP eCLIP11.23□□□□□ -0.613e-9■■■□□ 17
TOP3B-210ENST00000444502 PDGFRBP09619 1106 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 ITGA4P13612 1032 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 ATF2P15336 505 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 THPOP40225 353 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 CLUL1Q15846 466 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 ATF7IP2Q5U623 682 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 CCNYQ8ND76 341 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 GTF3C2Q8WUA4 911 aaPredicted RBP11.23□□□□□ -0.61
TOP3B-210ENST00000444502 CASKIN2Q8WXE0 1202 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 KAT5Q92993 513 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 HSD17B14Q9BPX1 270 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 NSRP1Q9H0G5 558 aaKnown RBP11.23□□□□□ -0.61
TOP3B-210ENST00000444502 KCND2Q9NZV8 630 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 SALL4Q9UJQ4 1053 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 hCG_2014768A0A024R1R8 64 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 F8VZ95 297 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 FGFR4P22455 802 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 NPTX2P47972 431 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 BEX3Q00994 111 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 LAMB3Q13751 1172 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 PAN2Q504Q3 1202 aaKnown RBP11.23□□□□□ -0.61
TOP3B-210ENST00000444502 SPATS2Q86XZ4 545 aaKnown RBP11.23□□□□□ -0.61
TOP3B-210ENST00000444502 CTAGE3PQ8IX95 158 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 ARL8AQ96BM9 186 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 FAM118BQ9BPY3 351 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 TTYH3Q9C0H2 523 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 RNF19AQ9NV58 838 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms