RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 STARD6P59095 220 aa22.69■■□□□ 1.22
CPNE1-219ENST00000440240 VARS2Q5ST30 1063 aaKnown RBP22.69■■□□□ 1.22
CPNE1-219ENST00000440240 ZPBP2Q6X784 338 aa22.69■■□□□ 1.22
CPNE1-219ENST00000440240 ST13P5Q8NFI4 369 aaPredicted RBP22.69■■□□□ 1.22
CPNE1-219ENST00000440240 CDK5RAP3Q96JB5 506 aa22.69■■□□□ 1.22
CPNE1-219ENST00000440240 MRPS23Q9Y3D9 190 aaKnown RBP22.69■■□□□ 1.22
CPNE1-219ENST00000440240 VWA8A3KMH1 1905 aa22.69■■□□□ 1.22
CPNE1-219ENST00000440240 H3BQV1 296 aa22.68■■□□□ 1.22
CPNE1-219ENST00000440240 ABLIM3O94929 683 aa22.68■■□□□ 1.22
CPNE1-219ENST00000440240 ROR1Q01973 937 aa22.68■■□□□ 1.22
CPNE1-219ENST00000440240 ARL6IP4Q66PJ3 421 aaKnown RBP22.68■■□□□ 1.22
CPNE1-219ENST00000440240 TMEM161BQ8NDZ6 487 aa22.68■■□□□ 1.22
CPNE1-219ENST00000440240 ZBTB45Q96K62 511 aaPredicted RBP22.68■■□□□ 1.22
CPNE1-219ENST00000440240 SEMA4AQ9H3S1 761 aa22.68■■□□□ 1.22
CPNE1-219ENST00000440240 HCFC1R1Q9NWW0 138 aa22.68■■□□□ 1.22
CPNE1-219ENST00000440240 ARHGEF37A1IGU5 675 aa22.67■■□□□ 1.22
CPNE1-219ENST00000440240 H0YCG3 227 aa22.67■■□□□ 1.22
CPNE1-219ENST00000440240 PRRG1O14668 218 aa22.67■■□□□ 1.22
CPNE1-219ENST00000440240 CLDN3O15551 220 aa22.67■■□□□ 1.22
CPNE1-219ENST00000440240 LRG1P02750 347 aa22.67■■□□□ 1.22
CPNE1-219ENST00000440240 HARSP12081 509 aaKnown RBP22.67■■□□□ 1.22
CPNE1-219ENST00000440240 ATF2P15336 505 aa22.67■■□□□ 1.22
CPNE1-219ENST00000440240 PTPN2P17706 415 aa22.67■■□□□ 1.22
CPNE1-219ENST00000440240 PFKPQ01813 784 aa22.67■■□□□ 1.22
CPNE1-219ENST00000440240 RAD51AP2Q09MP3 1159 aa22.67■■□□□ 1.22
CPNE1-219ENST00000440240 MRPL58Q14197 206 aaKnown RBP22.67■■□□□ 1.22
CPNE1-219ENST00000440240 SPECC1Q5M775 1068 aa22.67■■□□□ 1.22
CPNE1-219ENST00000440240 NPAS3Q8IXF0 933 aa22.67■■□□□ 1.22
CPNE1-219ENST00000440240 PNMA5Q96PV4 448 aa22.67■■□□□ 1.22
CPNE1-219ENST00000440240 AVENQ9NQS1 362 aaPredicted RBP22.67■■□□□ 1.22
CPNE1-219ENST00000440240 GDE1Q9NZC3 331 aa22.67■■□□□ 1.22
CPNE1-219ENST00000440240 LARSQ9P2J5 1176 aaKnown RBP22.67■■□□□ 1.22
CPNE1-219ENST00000440240 ANKFY1Q9P2R3 1169 aa22.67■■□□□ 1.22
CPNE1-219ENST00000440240 SPTBN4Q9H254 2564 aa22.67■■□□□ 1.22
CPNE1-219ENST00000440240 TRIP11Q15643 1979 aa22.67■■□□□ 1.22
CPNE1-219ENST00000440240 VWA3AA6NCI4 1184 aa22.66■■□□□ 1.22
CPNE1-219ENST00000440240 TBC1D4O60343 1298 aa22.66■■□□□ 1.22
CPNE1-219ENST00000440240 DCNP07585 359 aaKnown RBP22.66■■□□□ 1.22
CPNE1-219ENST00000440240 RHOP08100 348 aa22.66■■□□□ 1.22
CPNE1-219ENST00000440240 MAPTP10636 758 aaKnown RBP22.66■■□□□ 1.22
CPNE1-219ENST00000440240 SLC12A3P55017 1021 aa22.66■■□□□ 1.22
CPNE1-219ENST00000440240 NOLC1Q14978 699 aaKnown RBP eCLIP22.66■■□□□ 1.223e-8■□□□□ 8.2
CPNE1-219ENST00000440240 SLC10A6Q3KNW5 377 aa22.66■■□□□ 1.22
CPNE1-219ENST00000440240 TPGS2Q68CL5 300 aa22.66■■□□□ 1.22
CPNE1-219ENST00000440240 TCEAL8Q8IYN2 117 aa22.66■■□□□ 1.22
CPNE1-219ENST00000440240 C18orf25Q96B23 403 aaPredicted RBP22.66■■□□□ 1.22
CPNE1-219ENST00000440240 TMX3Q96JJ7 454 aa22.66■■□□□ 1.22
CPNE1-219ENST00000440240 SUSD3Q96L08 255 aa22.66■■□□□ 1.22
CPNE1-219ENST00000440240 PLIN2Q99541 437 aa22.66■■□□□ 1.22
CPNE1-219ENST00000440240 PLEKHA5Q9HAU0 1116 aa22.66■■□□□ 1.22
CPNE1-219ENST00000440240 DLGAP2Q9P1A6 1054 aa22.66■■□□□ 1.22
CPNE1-219ENST00000440240 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.66■■□□□ 1.22
CPNE1-219ENST00000440240 GVINP1Q7Z2Y8 2422 aa22.65■■□□□ 1.22
CPNE1-219ENST00000440240 WDR27A2RRH5 827 aa22.65■■□□□ 1.22
CPNE1-219ENST00000440240 SLC26A4O43511 780 aa22.65■■□□□ 1.22
CPNE1-219ENST00000440240 PLA2G4BP0C869 781 aa22.65■■□□□ 1.22
CPNE1-219ENST00000440240 ARPP19P56211 112 aa22.65■■□□□ 1.22
CPNE1-219ENST00000440240 PRKCQQ04759 706 aa22.65■■□□□ 1.22
CPNE1-219ENST00000440240 MCL1Q07820 350 aa22.65■■□□□ 1.22
CPNE1-219ENST00000440240 SNW1Q13573 536 aaKnown RBP22.65■■□□□ 1.22
CPNE1-219ENST00000440240 SLC44A4Q53GD3 710 aa22.65■■□□□ 1.22
CPNE1-219ENST00000440240 APPL2Q8NEU8 664 aa22.65■■□□□ 1.22
CPNE1-219ENST00000440240 PJA1Q8NG27 643 aa22.65■■□□□ 1.22
CPNE1-219ENST00000440240 AK8Q96MA6 479 aa22.65■■□□□ 1.22
CPNE1-219ENST00000440240 MAFFQ9ULX9 164 aa22.65■■□□□ 1.22
CPNE1-219ENST00000440240 KANSL1LA0AUZ9 987 aa22.64■■□□□ 1.21
CPNE1-219ENST00000440240 ECI2O75521 394 aa22.64■■□□□ 1.21
CPNE1-219ENST00000440240 SCP2P22307 547 aa22.64■■□□□ 1.21
CPNE1-219ENST00000440240 GJB2P29033 226 aa22.64■■□□□ 1.21
CPNE1-219ENST00000440240 MARCKSP29966 332 aaPredicted RBP22.64■■□□□ 1.21
CPNE1-219ENST00000440240 MATR3P43243 847 aaKnown RBP eCLIP22.64■■□□□ 1.21
CPNE1-219ENST00000440240 CTXN3Q4LDR2 81 aa22.64■■□□□ 1.21
CPNE1-219ENST00000440240 C1orf210Q8IVY1 113 aa22.64■■□□□ 1.21
CPNE1-219ENST00000440240 ADSSL1Q8N142 457 aa22.64■■□□□ 1.21
CPNE1-219ENST00000440240 MCRS1Q96EZ8 462 aa22.64■■□□□ 1.21
CPNE1-219ENST00000440240 CYP4F11Q9HBI6 524 aa22.64■■□□□ 1.21
CPNE1-219ENST00000440240 FBXL5Q9UKA1 691 aa22.64■■□□□ 1.21
CPNE1-219ENST00000440240 WDR87Q6ZQQ6 2873 aa22.64■■□□□ 1.21
CPNE1-219ENST00000440240 EP300Q09472 2414 aaPredicted RBP22.63■■□□□ 1.21
CPNE1-219ENST00000440240 ZNF197O14709 1029 aa22.63■■□□□ 1.21
CPNE1-219ENST00000440240 MEFVO15553 781 aaPredicted RBP22.63■■□□□ 1.21
CPNE1-219ENST00000440240 CLTAP09496 248 aa22.63■■□□□ 1.21
CPNE1-219ENST00000440240 MCM4P33991 863 aa22.63■■□□□ 1.21
CPNE1-219ENST00000440240 MCM2P49736 904 aa22.63■■□□□ 1.21
CPNE1-219ENST00000440240 MLF2Q15773 248 aaPredicted RBP22.63■■□□□ 1.21
CPNE1-219ENST00000440240 KYAT1Q16773 422 aa22.63■■□□□ 1.21
CPNE1-219ENST00000440240 TMEM119Q4V9L6 283 aa22.63■■□□□ 1.21
CPNE1-219ENST00000440240 SEZ6Q53EL9 994 aa22.63■■□□□ 1.21
CPNE1-219ENST00000440240 ZNF280DQ6N043 979 aa22.63■■□□□ 1.21
CPNE1-219ENST00000440240 ING5Q8WYH8 240 aa22.63■■□□□ 1.21
CPNE1-219ENST00000440240 KCNN1Q92952 543 aa22.63■■□□□ 1.21
CPNE1-219ENST00000440240 TBC1D32Q96NH3 1257 aa22.63■■□□□ 1.21
CPNE1-219ENST00000440240 KXD1Q9BQD3 176 aa22.63■■□□□ 1.21
CPNE1-219ENST00000440240 OSBPL6Q9BZF3 934 aa22.63■■□□□ 1.21
CPNE1-219ENST00000440240 FOXQ1Q9C009 403 aa22.63■■□□□ 1.21
CPNE1-219ENST00000440240 UPF2Q9HAU5 1272 aaKnown RBP22.63■■□□□ 1.21
CPNE1-219ENST00000440240 ODF2LQ9ULJ1 636 aa22.63■■□□□ 1.21
CPNE1-219ENST00000440240 MICAL2O94851 1124 aa22.62■■□□□ 1.21
CPNE1-219ENST00000440240 UBA7P41226 1012 aa22.62■■□□□ 1.21
CPNE1-219ENST00000440240 HAUS6Q7Z4H7 955 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms