RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 RPF1Q9H9Y2 349 aaKnown RBP19.16■□□□□ 0.66
NUP50-208ENST00000430547 FBXW11Q9UKB1 542 aa19.16■□□□□ 0.66
NUP50-208ENST00000430547 SORCS3Q9UPU3 1222 aa19.16■□□□□ 0.66
NUP50-208ENST00000430547 TMEM221A6NGB7 291 aa19.15■□□□□ 0.66
NUP50-208ENST00000430547 MYMKA6NI61 221 aa19.15■□□□□ 0.66
NUP50-208ENST00000430547 M0R296 226 aa19.15■□□□□ 0.66
NUP50-208ENST00000430547 PPP6R2O75170 966 aa19.15■□□□□ 0.66
NUP50-208ENST00000430547 ZMYND10O75800 440 aa19.15■□□□□ 0.66
NUP50-208ENST00000430547 YEATS4O95619 227 aa19.15■□□□□ 0.66
NUP50-208ENST00000430547 IDEP14735 1019 aa19.15■□□□□ 0.66
NUP50-208ENST00000430547 MCM4P33991 863 aa19.15■□□□□ 0.66
NUP50-208ENST00000430547 OR1D2P34982 312 aa19.15■□□□□ 0.66
NUP50-208ENST00000430547 TNFSF9P41273 254 aa19.15■□□□□ 0.66
NUP50-208ENST00000430547 SIGLEC14Q08ET2 396 aa19.15■□□□□ 0.66
NUP50-208ENST00000430547 FOXD4L6Q3SYB3 417 aaPredicted RBP19.15■□□□□ 0.66
NUP50-208ENST00000430547 ZC2HC1CQ53FD0 456 aaPredicted RBP19.15■□□□□ 0.66
NUP50-208ENST00000430547 FOXD4L3Q6VB84 417 aaPredicted RBP19.15■□□□□ 0.66
NUP50-208ENST00000430547 FIZ1Q96SL8 496 aa19.15■□□□□ 0.66
NUP50-208ENST00000430547 RHOBTB2Q9BYZ6 727 aa19.15■□□□□ 0.66
NUP50-208ENST00000430547 ST6GALNAC4Q9H4F1 302 aa19.15■□□□□ 0.66
NUP50-208ENST00000430547 MTRRQ9UBK8 725 aa19.15■□□□□ 0.66
NUP50-208ENST00000430547 UBQLN1Q9UMX0 589 aaKnown RBP19.15■□□□□ 0.66
NUP50-208ENST00000430547 CDY1Q9Y6F8 540 aa19.15■□□□□ 0.66
NUP50-208ENST00000430547 CLUHO75153 1309 aa19.15■□□□□ 0.66
NUP50-208ENST00000430547 A0A0B4J269 797 aa19.14■□□□□ 0.65
NUP50-208ENST00000430547 TTC26A0AVF1 554 aa19.14■□□□□ 0.65
NUP50-208ENST00000430547 MEFVO15553 781 aaPredicted RBP19.14■□□□□ 0.65
NUP50-208ENST00000430547 F13A1P00488 732 aa19.14■□□□□ 0.65
NUP50-208ENST00000430547 IGFBP6P24592 240 aaPredicted RBP19.14■□□□□ 0.65
NUP50-208ENST00000430547 GBP2P32456 591 aaPredicted RBP19.14■□□□□ 0.65
NUP50-208ENST00000430547 SPAG1Q07617 926 aa19.14■□□□□ 0.65
NUP50-208ENST00000430547 PPM1LQ5SGD2 360 aa19.14■□□□□ 0.65
NUP50-208ENST00000430547 SLFN12LQ6IEE8 588 aa19.14■□□□□ 0.65
NUP50-208ENST00000430547 HFE2Q6ZVN8 426 aa19.14■□□□□ 0.65
NUP50-208ENST00000430547 FAM212AQ96EL1 285 aa19.14■□□□□ 0.65
NUP50-208ENST00000430547 MFSD14AQ96MC6 490 aa19.14■□□□□ 0.65
NUP50-208ENST00000430547 PRKD2Q9BZL6 878 aa19.14■□□□□ 0.65
NUP50-208ENST00000430547 WDR6Q9NNW5 1121 aaKnown RBP19.14■□□□□ 0.65
NUP50-208ENST00000430547 TUBGCP4Q9UGJ1 667 aa19.14■□□□□ 0.65
NUP50-208ENST00000430547 LIMD1Q9UGP4 676 aa19.14■□□□□ 0.65
NUP50-208ENST00000430547 EXOC7Q9UPT5 735 aa19.14■□□□□ 0.65
NUP50-208ENST00000430547 BACE2Q9Y5Z0 518 aa19.14■□□□□ 0.65
NUP50-208ENST00000430547 LACTBL1A8MY62 500 aa19.13■□□□□ 0.65
NUP50-208ENST00000430547 H7C4K7 107 aa19.13■□□□□ 0.65
NUP50-208ENST00000430547 SYN3O14994 580 aa19.13■□□□□ 0.65
NUP50-208ENST00000430547 CUTAO60888 179 aa19.13■□□□□ 0.65
NUP50-208ENST00000430547 C8AP07357 584 aa19.13■□□□□ 0.65
NUP50-208ENST00000430547 RAB33AQ14088 237 aa19.13■□□□□ 0.65
NUP50-208ENST00000430547 ADALQ6DHV7 355 aa19.13■□□□□ 0.65
NUP50-208ENST00000430547 CD300LGQ6UXG3 332 aa19.13■□□□□ 0.65
NUP50-208ENST00000430547 ZNF720Q7Z2F6 126 aa19.13■□□□□ 0.65
NUP50-208ENST00000430547 CD302Q8IX05 232 aa19.13■□□□□ 0.65
NUP50-208ENST00000430547 UBALD2Q8IYN6 164 aa19.13■□□□□ 0.65
NUP50-208ENST00000430547 PBXIP1Q96AQ6 731 aa19.13■□□□□ 0.65
NUP50-208ENST00000430547 ZNF707Q96C28 371 aaPredicted RBP19.13■□□□□ 0.65
NUP50-208ENST00000430547 TSPAN18Q96SJ8 248 aa19.13■□□□□ 0.65
NUP50-208ENST00000430547 LRRC27Q9C0I9 530 aa19.13■□□□□ 0.65
NUP50-208ENST00000430547 TBC1D7Q9P0N9 293 aa19.13■□□□□ 0.65
NUP50-208ENST00000430547 DOCK8Q8NF50 2099 aa19.12■□□□□ 0.65
NUP50-208ENST00000430547 TCHHQ07283 1943 aa19.12■□□□□ 0.65
NUP50-208ENST00000430547 A0A087X0B3 334 aa19.12■□□□□ 0.65
NUP50-208ENST00000430547 ADAM12O43184 909 aa19.12■□□□□ 0.65
NUP50-208ENST00000430547 XYLBO75191 536 aa19.12■□□□□ 0.65
NUP50-208ENST00000430547 GCNT3O95395 438 aa19.12■□□□□ 0.65
NUP50-208ENST00000430547 ASGR2P07307 311 aa19.12■□□□□ 0.65
NUP50-208ENST00000430547 HNRNPA1P09651 372 aaKnown RBP eCLIP19.12■□□□□ 0.65
NUP50-208ENST00000430547 ENOX2Q16206 610 aaKnown RBP19.12■□□□□ 0.65
NUP50-208ENST00000430547 VARS2Q5ST30 1063 aaKnown RBP19.12■□□□□ 0.65
NUP50-208ENST00000430547 ZBTB41Q5SVQ8 909 aa19.12■□□□□ 0.65
NUP50-208ENST00000430547 SLC39A4Q6P5W5 647 aa19.12■□□□□ 0.65
NUP50-208ENST00000430547 SUGP1Q8IWZ8 645 aaKnown RBP19.12■□□□□ 0.65
NUP50-208ENST00000430547 CCDC65Q8IXS2 484 aa19.12■□□□□ 0.65
NUP50-208ENST00000430547 APPL2Q8NEU8 664 aa19.12■□□□□ 0.65
NUP50-208ENST00000430547 SLC7A14Q8TBB6 771 aa19.12■□□□□ 0.65
NUP50-208ENST00000430547 KCNG4Q8TDN1 519 aa19.12■□□□□ 0.65
NUP50-208ENST00000430547 POMGNT1Q8WZA1 660 aa19.12■□□□□ 0.65
NUP50-208ENST00000430547 DNAJC19Q96DA6 116 aa19.12■□□□□ 0.65
NUP50-208ENST00000430547 SUSD3Q96L08 255 aa19.12■□□□□ 0.65
NUP50-208ENST00000430547 PANK4Q9NVE7 773 aa19.12■□□□□ 0.65
NUP50-208ENST00000430547 POLIQ9UNA4 740 aa19.12■□□□□ 0.65
NUP50-208ENST00000430547 DOCK6Q96HP0 2047 aa19.12■□□□□ 0.65
NUP50-208ENST00000430547 ANKRD63C9JTQ0 380 aa19.11■□□□□ 0.65
NUP50-208ENST00000430547 FAM189A1O60320 539 aa19.11■□□□□ 0.65
NUP50-208ENST00000430547 CYP3A5P20815 502 aa19.11■□□□□ 0.65
NUP50-208ENST00000430547 LRPAP1P30533 357 aa19.11■□□□□ 0.65
NUP50-208ENST00000430547 HOXA9P31269 272 aa19.11■□□□□ 0.65
NUP50-208ENST00000430547 ALCAMQ13740 583 aa19.11■□□□□ 0.65
NUP50-208ENST00000430547 POSTNQ15063 836 aa19.11■□□□□ 0.65
NUP50-208ENST00000430547 AXDND1Q5T1B0 1012 aaPredicted RBP19.11■□□□□ 0.65
NUP50-208ENST00000430547 ATL3Q6DD88 541 aa19.11■□□□□ 0.65
NUP50-208ENST00000430547 GET4Q7L5D6 327 aaPredicted RBP19.11■□□□□ 0.65
NUP50-208ENST00000430547 BEST2Q8NFU1 509 aa19.11■□□□□ 0.65
NUP50-208ENST00000430547 ACCSQ96QU6 501 aa19.11■□□□□ 0.65
NUP50-208ENST00000430547 TNMDQ9H2S6 317 aa19.11■□□□□ 0.65
NUP50-208ENST00000430547 CUEDC2Q9H467 287 aa19.11■□□□□ 0.65
NUP50-208ENST00000430547 OLFML3Q9NRN5 406 aa19.11■□□□□ 0.65
NUP50-208ENST00000430547 CPSF3Q9UKF6 684 aaKnown RBP19.11■□□□□ 0.65
NUP50-208ENST00000430547 AGO2Q9UKV8 859 aaKnown RBP19.11■□□□□ 0.65
NUP50-208ENST00000430547 CFAP45Q9UL16 551 aa19.11■□□□□ 0.65
NUP50-208ENST00000430547 PCDHB13Q9Y5F0 798 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms