RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 PACSIN3Q9UKS6 424 aa6.61□□□□□ -1.35
HMGB3P5-201ENST00000428894 MLH3Q9UHC1 1453 aa6.6□□□□□ -1.35
HMGB3P5-201ENST00000428894 PNPLA7Q6ZV29 1317 aa6.6□□□□□ -1.35
HMGB3P5-201ENST00000428894 SUPT6HQ7KZ85 1726 aaKnown RBP6.6□□□□□ -1.35
HMGB3P5-201ENST00000428894 RAP2AP10114 183 aa6.6□□□□□ -1.35
HMGB3P5-201ENST00000428894 OSMP13725 252 aa6.6□□□□□ -1.35
HMGB3P5-201ENST00000428894 IL2RBP14784 551 aa6.6□□□□□ -1.35
HMGB3P5-201ENST00000428894 ZEB1P37275 1124 aaPredicted RBP6.6□□□□□ -1.35
HMGB3P5-201ENST00000428894 MCAMP43121 646 aa6.6□□□□□ -1.35
HMGB3P5-201ENST00000428894 COL10A1Q03692 680 aa6.6□□□□□ -1.35
HMGB3P5-201ENST00000428894 RRP12Q5JTH9 1297 aaKnown RBP6.6□□□□□ -1.35
HMGB3P5-201ENST00000428894 AFMIDQ63HM1 303 aa6.6□□□□□ -1.35
HMGB3P5-201ENST00000428894 EGFLAMQ63HQ2 1017 aa6.6□□□□□ -1.35
HMGB3P5-201ENST00000428894 DNAJC10Q8IXB1 793 aa6.6□□□□□ -1.35
HMGB3P5-201ENST00000428894 HOXB13Q92826 284 aaPredicted RBP6.6□□□□□ -1.35
HMGB3P5-201ENST00000428894 NEU1Q99519 415 aa6.6□□□□□ -1.35
HMGB3P5-201ENST00000428894 MRI1Q9BV20 369 aa6.6□□□□□ -1.35
HMGB3P5-201ENST00000428894 SENP6Q9GZR1 1112 aaPredicted RBP6.6□□□□□ -1.35
HMGB3P5-201ENST00000428894 ATP11BQ9Y2G3 1177 aa6.6□□□□□ -1.35
HMGB3P5-201ENST00000428894 MAP3K2Q9Y2U5 619 aa6.6□□□□□ -1.35
HMGB3P5-201ENST00000428894 PCDHGA2Q9Y5H1 932 aa6.6□□□□□ -1.35
HMGB3P5-201ENST00000428894 KDM5CP41229 1560 aa6.6□□□□□ -1.35
HMGB3P5-201ENST00000428894 MED1Q15648 1581 aaPredicted RBP6.6□□□□□ -1.35
HMGB3P5-201ENST00000428894 PLA2R1Q13018 1463 aa6.6□□□□□ -1.35
HMGB3P5-201ENST00000428894 WASHC2AQ641Q2 1341 aa6.59□□□□□ -1.35
HMGB3P5-201ENST00000428894 HLA-DOAP06340 250 aa6.59□□□□□ -1.35
HMGB3P5-201ENST00000428894 POU3F3P20264 500 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P5-201ENST00000428894 MTNR1BP49286 362 aa6.59□□□□□ -1.35
HMGB3P5-201ENST00000428894 ERVK-21P61565 698 aa6.59□□□□□ -1.35
HMGB3P5-201ENST00000428894 HECTD2Q5U5R9 776 aa6.59□□□□□ -1.35
HMGB3P5-201ENST00000428894 MED25Q71SY5 747 aa6.59□□□□□ -1.35
HMGB3P5-201ENST00000428894 LCORLQ8N3X6 602 aa6.59□□□□□ -1.35
HMGB3P5-201ENST00000428894 LANCL2Q9NS86 450 aa6.59□□□□□ -1.35
HMGB3P5-201ENST00000428894 MOCS1Q9NZB8 636 aa6.59□□□□□ -1.35
HMGB3P5-201ENST00000428894 FPGT-TNNI3KV9GXZ4 949 aa6.59□□□□□ -1.35
HMGB3P5-201ENST00000428894 ARHGAP5Q13017 1502 aa6.59□□□□□ -1.35
HMGB3P5-201ENST00000428894 DIP2CQ9Y2E4 1556 aa6.58□□□□□ -1.36
HMGB3P5-201ENST00000428894 UNC119BA6NIH7 251 aa6.58□□□□□ -1.36
HMGB3P5-201ENST00000428894 ENDOD1O94919 500 aa6.58□□□□□ -1.36
HMGB3P5-201ENST00000428894 ATP5JP18859 108 aa6.58□□□□□ -1.36
HMGB3P5-201ENST00000428894 USP14P54578 494 aa6.58□□□□□ -1.36
HMGB3P5-201ENST00000428894 NANOS3P60323 173 aaKnown RBP6.58□□□□□ -1.36
HMGB3P5-201ENST00000428894 GUCY1B3Q02153 619 aa6.58□□□□□ -1.36
HMGB3P5-201ENST00000428894 TAP1Q03518 808 aa6.58□□□□□ -1.36
HMGB3P5-201ENST00000428894 RESTQ13127 1097 aa6.58□□□□□ -1.36
HMGB3P5-201ENST00000428894 AGAP9Q5VTM2 703 aa6.58□□□□□ -1.36
HMGB3P5-201ENST00000428894 TSHZ3Q63HK5 1081 aa6.58□□□□□ -1.36
HMGB3P5-201ENST00000428894 BEND2Q8NDZ0 799 aa6.58□□□□□ -1.36
HMGB3P5-201ENST00000428894 SLC2A13Q96QE2 648 aa6.58□□□□□ -1.36
HMGB3P5-201ENST00000428894 DNM3Q9UQ16 869 aa6.58□□□□□ -1.36
HMGB3P5-201ENST00000428894 GPR45Q9Y5Y3 372 aa6.58□□□□□ -1.36
HMGB3P5-201ENST00000428894 MROH2AA6NES4 1674 aa6.58□□□□□ -1.36
HMGB3P5-201ENST00000428894 CLIP1P30622 1438 aa6.58□□□□□ -1.36
HMGB3P5-201ENST00000428894 CPS1P31327 1500 aa6.57□□□□□ -1.36
HMGB3P5-201ENST00000428894 POMCP01189 267 aa6.57□□□□□ -1.36
HMGB3P5-201ENST00000428894 BMP5P22003 454 aa6.57□□□□□ -1.36
HMGB3P5-201ENST00000428894 DDX6P26196 483 aaKnown RBP eCLIP6.57□□□□□ -1.36
HMGB3P5-201ENST00000428894 GUCY1A2P33402 732 aa6.57□□□□□ -1.36
HMGB3P5-201ENST00000428894 SEPT2Q15019 361 aa6.57□□□□□ -1.36
HMGB3P5-201ENST00000428894 Q6YL49 198 aa6.57□□□□□ -1.36
HMGB3P5-201ENST00000428894 RHOT2Q8IXI1 618 aa6.57□□□□□ -1.36
HMGB3P5-201ENST00000428894 DRC7Q8IY82 874 aa6.57□□□□□ -1.36
HMGB3P5-201ENST00000428894 CMTR2Q8IYT2 770 aaKnown RBP6.57□□□□□ -1.36
HMGB3P5-201ENST00000428894 SUPT20HQ8NEM7 779 aa6.57□□□□□ -1.36
HMGB3P5-201ENST00000428894 OR56A1Q8NGH5 318 aa6.57□□□□□ -1.36
HMGB3P5-201ENST00000428894 ADAM2Q99965 735 aa6.57□□□□□ -1.36
HMGB3P5-201ENST00000428894 TMX1Q9H3N1 280 aa6.57□□□□□ -1.36
HMGB3P5-201ENST00000428894 TMEM140Q9NV12 185 aa6.57□□□□□ -1.36
HMGB3P5-201ENST00000428894 AJAP1Q9UKB5 411 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P5-201ENST00000428894 SIK3Q9Y2K2 1263 aa6.57□□□□□ -1.36
HMGB3P5-201ENST00000428894 PTPRKQ15262 1439 aa6.57□□□□□ -1.36
HMGB3P5-201ENST00000428894 KIF14Q15058 1648 aa6.57□□□□□ -1.36
HMGB3P5-201ENST00000428894 CDK13Q14004 1512 aaKnown RBP6.56□□□□□ -1.36
HMGB3P5-201ENST00000428894 TCOF1Q13428 1488 aaKnown RBP6.56□□□□□ -1.36
HMGB3P5-201ENST00000428894 K7ESF4 209 aa6.56□□□□□ -1.36
HMGB3P5-201ENST00000428894 FPR1P21462 350 aa6.56□□□□□ -1.36
HMGB3P5-201ENST00000428894 ALDH1A3P47895 512 aa6.56□□□□□ -1.36
HMGB3P5-201ENST00000428894 MXRA7P84157 204 aa6.56□□□□□ -1.36
HMGB3P5-201ENST00000428894 KLF1Q13351 362 aaPredicted RBP6.56□□□□□ -1.36
HMGB3P5-201ENST00000428894 TP53BP2Q13625 1128 aa6.56□□□□□ -1.36
HMGB3P5-201ENST00000428894 UBXN2BQ14CS0 331 aa6.56□□□□□ -1.36
HMGB3P5-201ENST00000428894 OTUD7BQ6GQQ9 843 aa6.56□□□□□ -1.36
HMGB3P5-201ENST00000428894 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.56□□□□□ -1.36
HMGB3P5-201ENST00000428894 REXO4Q9GZR2 422 aaKnown RBP6.56□□□□□ -1.36
HMGB3P5-201ENST00000428894 TOR3AQ9H497 397 aa6.56□□□□□ -1.36
HMGB3P5-201ENST00000428894 KLHL11Q9NVR0 708 aa6.56□□□□□ -1.36
HMGB3P5-201ENST00000428894 MCM8Q9UJA3 840 aa6.56□□□□□ -1.36
HMGB3P5-201ENST00000428894 ACTL7AQ9Y615 435 aa6.56□□□□□ -1.36
HMGB3P5-201ENST00000428894 FMN1Q68DA7 1419 aa6.56□□□□□ -1.36
HMGB3P5-201ENST00000428894 ABCA6Q8N139 1617 aa6.55□□□□□ -1.36
HMGB3P5-201ENST00000428894 FAM171A2A8MVW0 826 aa6.55□□□□□ -1.36
HMGB3P5-201ENST00000428894 PPFIA2O75334 1257 aa6.55□□□□□ -1.36
HMGB3P5-201ENST00000428894 LMNAP02545 664 aaKnown RBP6.55□□□□□ -1.36
HMGB3P5-201ENST00000428894 CFIP05156 583 aa6.55□□□□□ -1.36
HMGB3P5-201ENST00000428894 AGXTP21549 392 aa6.55□□□□□ -1.36
HMGB3P5-201ENST00000428894 SLC6A9P48067 706 aa6.55□□□□□ -1.36
HMGB3P5-201ENST00000428894 MGAT2Q10469 447 aa6.55□□□□□ -1.36
HMGB3P5-201ENST00000428894 DDX42Q86XP3 938 aaKnown RBP eCLIP6.55□□□□□ -1.36
HMGB3P5-201ENST00000428894 AMOTL1Q8IY63 956 aa6.55□□□□□ -1.36
HMGB3P5-201ENST00000428894 CCHCR1Q8TD31 782 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms