RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 GPR65Q8IYL9 337 aa13.89□□□□□ -0.19
GPC1-204ENST00000426280 KREMEN2Q8NCW0 462 aa13.89□□□□□ -0.19
GPC1-204ENST00000426280 MSTO1Q9BUK6 570 aa13.89□□□□□ -0.19
GPC1-204ENST00000426280 C1QTNF1Q9BXJ1 281 aa13.89□□□□□ -0.19
GPC1-204ENST00000426280 SFXN1Q9H9B4 322 aa13.89□□□□□ -0.19
GPC1-204ENST00000426280 PANK4Q9NVE7 773 aa13.89□□□□□ -0.19
GPC1-204ENST00000426280 KBTBD4Q9NVX7 518 aa13.89□□□□□ -0.19
GPC1-204ENST00000426280 STK39Q9UEW8 545 aa13.89□□□□□ -0.19
GPC1-204ENST00000426280 SSX2IPQ9Y2D8 614 aa13.89□□□□□ -0.19
GPC1-204ENST00000426280 STYXL1Q9Y6J8 313 aa13.89□□□□□ -0.19
GPC1-204ENST00000426280 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.88□□□□□ -0.19
GPC1-204ENST00000426280 H0YCG3 227 aa13.88□□□□□ -0.19
GPC1-204ENST00000426280 ASGR2P07307 311 aa13.88□□□□□ -0.19
GPC1-204ENST00000426280 NFICP08651 508 aa13.88□□□□□ -0.19
GPC1-204ENST00000426280 OR1D2P34982 312 aa13.88□□□□□ -0.19
GPC1-204ENST00000426280 TXLNAP40222 546 aa13.88□□□□□ -0.19
GPC1-204ENST00000426280 MTHFRP42898 656 aa13.88□□□□□ -0.19
GPC1-204ENST00000426280 NTHL1P78549 312 aa13.88□□□□□ -0.19
GPC1-204ENST00000426280 MRPL58Q14197 206 aaKnown RBP13.88□□□□□ -0.19
GPC1-204ENST00000426280 TMEM31Q5JXX7 168 aa13.88□□□□□ -0.19
GPC1-204ENST00000426280 JADE1Q6IE81 842 aa13.88□□□□□ -0.19
GPC1-204ENST00000426280 POTEHQ6S545 545 aa13.88□□□□□ -0.19
GPC1-204ENST00000426280 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.88□□□□□ -0.19
GPC1-204ENST00000426280 GRAMD1CQ8IYS0 662 aa13.88□□□□□ -0.19
GPC1-204ENST00000426280 FAM212AQ96EL1 285 aa13.88□□□□□ -0.19
GPC1-204ENST00000426280 UROC1Q96N76 676 aa13.88□□□□□ -0.19
GPC1-204ENST00000426280 IPO9Q96P70 1041 aaKnown RBP13.88□□□□□ -0.19
GPC1-204ENST00000426280 POP1Q99575 1024 aaKnown RBP13.88□□□□□ -0.19
GPC1-204ENST00000426280 BLZF1Q9H2G9 400 aa13.88□□□□□ -0.19
GPC1-204ENST00000426280 MRPL44Q9H9J2 332 aaKnown RBP13.88□□□□□ -0.19
GPC1-204ENST00000426280 GDPD2Q9HCC8 539 aa13.88□□□□□ -0.19
GPC1-204ENST00000426280 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.88□□□□□ -0.19
GPC1-204ENST00000426280 MTRRQ9UBK8 725 aa13.88□□□□□ -0.19
GPC1-204ENST00000426280 LIMD1Q9UGP4 676 aa13.88□□□□□ -0.19
GPC1-204ENST00000426280 CFAP45Q9UL16 551 aa13.88□□□□□ -0.19
GPC1-204ENST00000426280 TIMM13Q9Y5L4 95 aaPredicted RBP13.88□□□□□ -0.19
GPC1-204ENST00000426280 C2orf16Q68DN1 1984 aa13.87□□□□□ -0.19
GPC1-204ENST00000426280 SPTLC1O15269 473 aa13.87□□□□□ -0.19
GPC1-204ENST00000426280 POLR2DO15514 142 aaKnown RBP13.87□□□□□ -0.19
GPC1-204ENST00000426280 ZMYND10O75800 440 aa13.87□□□□□ -0.19
GPC1-204ENST00000426280 GCNT3O95395 438 aa13.87□□□□□ -0.19
GPC1-204ENST00000426280 PAPLNO95428 1278 aa13.87□□□□□ -0.19
GPC1-204ENST00000426280 ALADP13716 330 aa13.87□□□□□ -0.19
GPC1-204ENST00000426280 KRT85P78386 507 aa13.87□□□□□ -0.19
GPC1-204ENST00000426280 ZXDAP98168 799 aa13.87□□□□□ -0.19
GPC1-204ENST00000426280 RAB33AQ14088 237 aa13.87□□□□□ -0.19
GPC1-204ENST00000426280 VARS2Q5ST30 1063 aaKnown RBP13.87□□□□□ -0.19
GPC1-204ENST00000426280 RESP18Q5W5W9 173 aa13.87□□□□□ -0.19
GPC1-204ENST00000426280 ATL3Q6DD88 541 aa13.87□□□□□ -0.19
GPC1-204ENST00000426280 CMASQ8NFW8 434 aaPredicted RBP13.87□□□□□ -0.19
GPC1-204ENST00000426280 LEO1Q8WVC0 666 aaPredicted RBP13.87□□□□□ -0.19
GPC1-204ENST00000426280 EDAQ92838 391 aa13.87□□□□□ -0.19
GPC1-204ENST00000426280 KIF12Q96FN5 646 aa13.87□□□□□ -0.19
GPC1-204ENST00000426280 RIPOR3Q96MK2 946 aa13.87□□□□□ -0.19
GPC1-204ENST00000426280 MYADMQ96S97 322 aa13.87□□□□□ -0.19
GPC1-204ENST00000426280 TRIM9Q9C026 710 aa13.87□□□□□ -0.19
GPC1-204ENST00000426280 RPF1Q9H9Y2 349 aaKnown RBP13.87□□□□□ -0.19
GPC1-204ENST00000426280 PLEKHA5Q9HAU0 1116 aa13.87□□□□□ -0.19
GPC1-204ENST00000426280 SLC38A7Q9NVC3 462 aa13.87□□□□□ -0.19
GPC1-204ENST00000426280 FBXW11Q9UKB1 542 aa13.87□□□□□ -0.19
GPC1-204ENST00000426280 AGO2Q9UKV8 859 aaKnown RBP13.87□□□□□ -0.19
GPC1-204ENST00000426280 CIZ1Q9ULV3 898 aaPredicted RBP13.87□□□□□ -0.19
GPC1-204ENST00000426280 CDY1Q9Y6F8 540 aa13.87□□□□□ -0.19
GPC1-204ENST00000426280 GOLGA8IPA6NC78 632 aa13.86□□□□□ -0.19
GPC1-204ENST00000426280 GOLGA8JA6NMD2 632 aa13.86□□□□□ -0.19
GPC1-204ENST00000426280 NRG2O14511 850 aaPredicted RBP13.86□□□□□ -0.19
GPC1-204ENST00000426280 SEC24AO95486 1093 aa13.86□□□□□ -0.19
GPC1-204ENST00000426280 GAP43P17677 238 aa13.86□□□□□ -0.19
GPC1-204ENST00000426280 LRPAP1P30533 357 aa13.86□□□□□ -0.19
GPC1-204ENST00000426280 RPL9P32969 192 aaKnown RBP13.86□□□□□ -0.19
GPC1-204ENST00000426280 ME1P48163 572 aa13.86□□□□□ -0.19
GPC1-204ENST00000426280 CDR1P51861 262 aa13.86□□□□□ -0.19
GPC1-204ENST00000426280 ELAVL2Q12926 359 aaKnown RBP13.86□□□□□ -0.19
GPC1-204ENST00000426280 L1TD1Q5T7N2 865 aaKnown RBP13.86□□□□□ -0.19
GPC1-204ENST00000426280 ADALQ6DHV7 355 aa13.86□□□□□ -0.19
GPC1-204ENST00000426280 HFE2Q6ZVN8 426 aa13.86□□□□□ -0.19
GPC1-204ENST00000426280 EFCAB13Q8IY85 973 aa13.86□□□□□ -0.19
GPC1-204ENST00000426280 RSAD2Q8WXG1 361 aa13.86□□□□□ -0.19
GPC1-204ENST00000426280 SMG7Q92540 1137 aaKnown RBP13.86□□□□□ -0.19
GPC1-204ENST00000426280 SAAL1Q96ER3 474 aa13.86□□□□□ -0.19
GPC1-204ENST00000426280 SUSD3Q96L08 255 aa13.86□□□□□ -0.19
GPC1-204ENST00000426280 SPATA32Q96LK8 384 aa13.86□□□□□ -0.19
GPC1-204ENST00000426280 NECTIN4Q96NY8 510 aa13.86□□□□□ -0.19
GPC1-204ENST00000426280 CBWD1Q9BRT8 395 aa13.86□□□□□ -0.19
GPC1-204ENST00000426280 PCIF1Q9H4Z3 704 aa13.86□□□□□ -0.19
GPC1-204ENST00000426280 OLFML3Q9NRN5 406 aa13.86□□□□□ -0.19
GPC1-204ENST00000426280 HCFC1R1Q9NWW0 138 aa13.86□□□□□ -0.19
GPC1-204ENST00000426280 CHMP5Q9NZZ3 219 aa13.86□□□□□ -0.19
GPC1-204ENST00000426280 SERTAD1Q9UHV2 236 aa13.86□□□□□ -0.19
GPC1-204ENST00000426280 ATP6V1DQ9Y5K8 247 aa13.86□□□□□ -0.19
GPC1-204ENST00000426280 PDCD11Q14690 1871 aaKnown RBP13.86□□□□□ -0.19
GPC1-204ENST00000426280 NCOR1O75376 2440 aa13.85□□□□□ -0.19
GPC1-204ENST00000426280 WDR27A2RRH5 827 aa13.85□□□□□ -0.19
GPC1-204ENST00000426280 SPDYE4A6NLX3 237 aa13.85□□□□□ -0.19
GPC1-204ENST00000426280 CCL16O15467 120 aa13.85□□□□□ -0.19
GPC1-204ENST00000426280 VNN2O95498 520 aa13.85□□□□□ -0.19
GPC1-204ENST00000426280 PDGFBP01127 241 aaPredicted RBP13.85□□□□□ -0.19
GPC1-204ENST00000426280 OR4Q2P0C623 313 aa13.85□□□□□ -0.19
GPC1-204ENST00000426280 ARPP19P56211 112 aa13.85□□□□□ -0.19
GPC1-204ENST00000426280 ROR1Q01973 937 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms