RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 CXCL8P10145 99 aa10.13□□□□□ -0.79
NUP50-206ENST00000422489 ELF1P32519 619 aa10.13□□□□□ -0.79
NUP50-206ENST00000422489 MCM4P33991 863 aa10.13□□□□□ -0.79
NUP50-206ENST00000422489 TXLNAP40222 546 aa10.13□□□□□ -0.79
NUP50-206ENST00000422489 TNFSF9P41273 254 aa10.13□□□□□ -0.79
NUP50-206ENST00000422489 NHLH1Q02575 133 aa10.13□□□□□ -0.79
NUP50-206ENST00000422489 PTPAQ15257 358 aa10.13□□□□□ -0.79
NUP50-206ENST00000422489 ZC2HC1CQ53FD0 456 aaPredicted RBP10.13□□□□□ -0.79
NUP50-206ENST00000422489 VARS2Q5ST30 1063 aaKnown RBP10.13□□□□□ -0.79
NUP50-206ENST00000422489 FOXD4L5Q5VV16 416 aaPredicted RBP10.13□□□□□ -0.79
NUP50-206ENST00000422489 FLCNQ8NFG4 579 aa10.13□□□□□ -0.79
NUP50-206ENST00000422489 SLC7A14Q8TBB6 771 aa10.13□□□□□ -0.79
NUP50-206ENST00000422489 FOXD4L4Q8WXT5 416 aaPredicted RBP10.13□□□□□ -0.79
NUP50-206ENST00000422489 KIF12Q96FN5 646 aa10.13□□□□□ -0.79
NUP50-206ENST00000422489 MSTO1Q9BUK6 570 aa10.13□□□□□ -0.79
NUP50-206ENST00000422489 CCSER1Q9C0I3 900 aa10.13□□□□□ -0.79
NUP50-206ENST00000422489 HAPLN2Q9GZV7 340 aa10.13□□□□□ -0.79
NUP50-206ENST00000422489 RPF1Q9H9Y2 349 aaKnown RBP10.13□□□□□ -0.79
NUP50-206ENST00000422489 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.13□□□□□ -0.79
NUP50-206ENST00000422489 CNTN3Q9P232 1028 aa10.13□□□□□ -0.79
NUP50-206ENST00000422489 IGSF9Q9P2J2 1179 aa10.13□□□□□ -0.79
NUP50-206ENST00000422489 TFIP11Q9UBB9 837 aaKnown RBP10.13□□□□□ -0.79
NUP50-206ENST00000422489 MTRRQ9UBK8 725 aa10.13□□□□□ -0.79
NUP50-206ENST00000422489 FBXO2Q9UK22 296 aaPredicted RBP10.13□□□□□ -0.79
NUP50-206ENST00000422489 FBXW11Q9UKB1 542 aa10.13□□□□□ -0.79
NUP50-206ENST00000422489 SRPRBQ9Y5M8 271 aaKnown RBP10.13□□□□□ -0.79
NUP50-206ENST00000422489 BACE2Q9Y5Z0 518 aa10.13□□□□□ -0.79
NUP50-206ENST00000422489 K7ELQ4 463 aaPredicted RBP10.12□□□□□ -0.79
NUP50-206ENST00000422489 PRRG1O14668 218 aa10.12□□□□□ -0.79
NUP50-206ENST00000422489 HNRNPDLO14979 420 aaKnown RBP10.12□□□□□ -0.79
NUP50-206ENST00000422489 STX6O43752 255 aa10.12□□□□□ -0.79
NUP50-206ENST00000422489 NARSO43776 548 aaKnown RBP10.12□□□□□ -0.79
NUP50-206ENST00000422489 CFHP08603 1231 aa10.12□□□□□ -0.79
NUP50-206ENST00000422489 PRR29P0C7W0 189 aa10.12□□□□□ -0.79
NUP50-206ENST00000422489 LAMP2P13473 410 aa10.12□□□□□ -0.79
NUP50-206ENST00000422489 PPP2R3AQ06190 1150 aa10.12□□□□□ -0.79
NUP50-206ENST00000422489 CTXN3Q4LDR2 81 aa10.12□□□□□ -0.79
NUP50-206ENST00000422489 ZBTB41Q5SVQ8 909 aa10.12□□□□□ -0.79
NUP50-206ENST00000422489 DSTYKQ6XUX3 929 aa10.12□□□□□ -0.79
NUP50-206ENST00000422489 SV2BQ7L1I2 683 aa10.12□□□□□ -0.79
NUP50-206ENST00000422489 TMEM130Q8N3G9 435 aa10.12□□□□□ -0.79
NUP50-206ENST00000422489 SLC44A3Q8N4M1 653 aa10.12□□□□□ -0.79
NUP50-206ENST00000422489 PRSS33Q8NF86 280 aa10.12□□□□□ -0.79
NUP50-206ENST00000422489 INTS4Q96HW7 963 aaKnown RBP10.12□□□□□ -0.79
NUP50-206ENST00000422489 USP28Q96RU2 1077 aa10.12□□□□□ -0.79
NUP50-206ENST00000422489 RHOBTB2Q9BYZ6 727 aa10.12□□□□□ -0.79
NUP50-206ENST00000422489 ZSCAN16Q9H4T2 348 aaPredicted RBP10.12□□□□□ -0.79
NUP50-206ENST00000422489 PLEKHA5Q9HAU0 1116 aa10.12□□□□□ -0.79
NUP50-206ENST00000422489 TBC1D7Q9P0N9 293 aa10.12□□□□□ -0.79
NUP50-206ENST00000422489 TUBGCP4Q9UGJ1 667 aa10.12□□□□□ -0.79
NUP50-206ENST00000422489 MTMR6Q9Y217 621 aa10.12□□□□□ -0.79
NUP50-206ENST00000422489 NCOR1O75376 2440 aa10.12□□□□□ -0.79
NUP50-206ENST00000422489 ANKRD63C9JTQ0 380 aa10.11□□□□□ -0.79
NUP50-206ENST00000422489 OGTO15294 1046 aa10.11□□□□□ -0.79
NUP50-206ENST00000422489 XPOTO43592 962 aaKnown RBP10.11□□□□□ -0.79
NUP50-206ENST00000422489 LRG1P02750 347 aa10.11□□□□□ -0.79
NUP50-206ENST00000422489 HSP90AA1P07900 732 aaKnown RBP10.11□□□□□ -0.79
NUP50-206ENST00000422489 IDEP14735 1019 aa10.11□□□□□ -0.79
NUP50-206ENST00000422489 RFX1P22670 979 aa10.11□□□□□ -0.79
NUP50-206ENST00000422489 GUCY2FP51841 1108 aa10.11□□□□□ -0.79
NUP50-206ENST00000422489 ZNF131P52739 623 aa10.11□□□□□ -0.79
NUP50-206ENST00000422489 PTPN5P54829 565 aa10.11□□□□□ -0.79
NUP50-206ENST00000422489 SLC39A14Q15043 492 aa10.11□□□□□ -0.79
NUP50-206ENST00000422489 STK38Q15208 465 aa10.11□□□□□ -0.79
NUP50-206ENST00000422489 KYAT1Q16773 422 aa10.11□□□□□ -0.79
NUP50-206ENST00000422489 UVSSAQ2YD98 709 aa10.11□□□□□ -0.79
NUP50-206ENST00000422489 FOXD4L6Q3SYB3 417 aaPredicted RBP10.11□□□□□ -0.79
NUP50-206ENST00000422489 ADALQ6DHV7 355 aa10.11□□□□□ -0.79
NUP50-206ENST00000422489 FOXD4L3Q6VB84 417 aaPredicted RBP10.11□□□□□ -0.79
NUP50-206ENST00000422489 SPRYD3Q8NCJ5 442 aa10.11□□□□□ -0.79
NUP50-206ENST00000422489 APPL2Q8NEU8 664 aa10.11□□□□□ -0.79
NUP50-206ENST00000422489 ZNF461Q8TAF7 563 aa10.11□□□□□ -0.79
NUP50-206ENST00000422489 ITFG1Q8TB96 612 aa10.11□□□□□ -0.79
NUP50-206ENST00000422489 DDX12PQ92771 950 aa10.11□□□□□ -0.79
NUP50-206ENST00000422489 PRRX2Q99811 253 aa10.11□□□□□ -0.79
NUP50-206ENST00000422489 CYP4F11Q9HBI6 524 aa10.11□□□□□ -0.79
NUP50-206ENST00000422489 HCFC1R1Q9NWW0 138 aa10.11□□□□□ -0.79
NUP50-206ENST00000422489 EPS15L1Q9UBC2 864 aa10.11□□□□□ -0.79
NUP50-206ENST00000422489 DNMT3BQ9UBC3 853 aaKnown RBP10.11□□□□□ -0.79
NUP50-206ENST00000422489 FBXL5Q9UKA1 691 aa10.11□□□□□ -0.79
NUP50-206ENST00000422489 CA14Q9ULX7 337 aa10.11□□□□□ -0.79
NUP50-206ENST00000422489 UBQLN1Q9UMX0 589 aaKnown RBP10.11□□□□□ -0.79
NUP50-206ENST00000422489 TIMM13Q9Y5L4 95 aaPredicted RBP10.11□□□□□ -0.79
NUP50-206ENST00000422489 MUC3AQ02505 3323 aa10.1□□□□□ -0.79
NUP50-206ENST00000422489 A0A0B4J269 797 aa10.1□□□□□ -0.79
NUP50-206ENST00000422489 TTC26A0AVF1 554 aa10.1□□□□□ -0.79
NUP50-206ENST00000422489 SYN3O14994 580 aa10.1□□□□□ -0.79
NUP50-206ENST00000422489 PTPN2P17706 415 aa10.1□□□□□ -0.79
NUP50-206ENST00000422489 SCP2P22307 547 aa10.1□□□□□ -0.79
NUP50-206ENST00000422489 ABCD1P33897 745 aa10.1□□□□□ -0.79
NUP50-206ENST00000422489 STAT6P42226 847 aa10.1□□□□□ -0.79
NUP50-206ENST00000422489 ACOT2P49753 483 aa10.1□□□□□ -0.79
NUP50-206ENST00000422489 GTF2BQ00403 316 aa10.1□□□□□ -0.79
NUP50-206ENST00000422489 ROR1Q01973 937 aa10.1□□□□□ -0.79
NUP50-206ENST00000422489 ENOX2Q16206 610 aaKnown RBP10.1□□□□□ -0.79
NUP50-206ENST00000422489 PABPC1LQ4VXU2 614 aaKnown RBP10.1□□□□□ -0.79
NUP50-206ENST00000422489 ASTLQ6HA08 431 aaPredicted RBP10.1□□□□□ -0.79
NUP50-206ENST00000422489 JADE1Q6IE81 842 aa10.1□□□□□ -0.79
NUP50-206ENST00000422489 SLFN12LQ6IEE8 588 aa10.1□□□□□ -0.79
NUP50-206ENST00000422489 CCDC73Q6ZRK6 1079 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms