RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 TEX13BQ9BXU2 312 aa4.42□□□□□ -1.7
CNGA1-203ENST00000420489 BRD9Q9H8M2 597 aa4.42□□□□□ -1.7
CNGA1-203ENST00000420489 SLC5A6Q9Y289 635 aa4.42□□□□□ -1.7
CNGA1-203ENST00000420489 RNF114Q9Y508 228 aa4.42□□□□□ -1.7
CNGA1-203ENST00000420489 SNX11Q9Y5W9 270 aa4.42□□□□□ -1.7
CNGA1-203ENST00000420489 CNOT1A5YKK6 2376 aaKnown RBP4.42□□□□□ -1.7
CNGA1-203ENST00000420489 SPAARA0A1B0GVQ0 90 aa4.42□□□□□ -1.7
CNGA1-203ENST00000420489 LDHBP07195 334 aaKnown RBP4.42□□□□□ -1.7
CNGA1-203ENST00000420489 CTSBP07858 339 aa4.42□□□□□ -1.7
CNGA1-203ENST00000420489 SYPP08247 313 aa4.42□□□□□ -1.7
CNGA1-203ENST00000420489 ERVPABLB-1P60509 514 aa4.42□□□□□ -1.7
CNGA1-203ENST00000420489 CXADRP78310 365 aa4.42□□□□□ -1.7
CNGA1-203ENST00000420489 DDX10Q13206 875 aaKnown RBP4.42□□□□□ -1.7
CNGA1-203ENST00000420489 LMBRD2Q68DH5 695 aaPredicted RBP4.42□□□□□ -1.7
CNGA1-203ENST00000420489 KBTBD6Q86V97 674 aa4.42□□□□□ -1.7
CNGA1-203ENST00000420489 SPACA3Q8IXA5 215 aa4.42□□□□□ -1.7
CNGA1-203ENST00000420489 SMYD4Q8IYR2 804 aaPredicted RBP4.42□□□□□ -1.7
CNGA1-203ENST00000420489 CCDC26Q8TAB7 109 aa4.42□□□□□ -1.7
CNGA1-203ENST00000420489 E2F7Q96AV8 911 aa4.42□□□□□ -1.7
CNGA1-203ENST00000420489 MIB2Q96AX9 1013 aa4.42□□□□□ -1.7
CNGA1-203ENST00000420489 KAZALD1Q96I82 304 aa4.42□□□□□ -1.7
CNGA1-203ENST00000420489 HEXIM2Q96MH2 286 aaKnown RBP4.42□□□□□ -1.7
CNGA1-203ENST00000420489 SLITRK1Q96PX8 696 aa4.42□□□□□ -1.7
CNGA1-203ENST00000420489 SEMA4CQ9C0C4 833 aa4.42□□□□□ -1.7
CNGA1-203ENST00000420489 SPRTNQ9H040 489 aaPredicted RBP4.42□□□□□ -1.7
CNGA1-203ENST00000420489 PANK3Q9H999 370 aa4.42□□□□□ -1.7
CNGA1-203ENST00000420489 FAM105AQ9NUU6 356 aa4.42□□□□□ -1.7
CNGA1-203ENST00000420489 ZFYVE26Q68DK2 2539 aa4.41□□□□□ -1.7
CNGA1-203ENST00000420489 MEFVO15553 781 aaPredicted RBP4.41□□□□□ -1.7
CNGA1-203ENST00000420489 DYNC1LI2O43237 492 aaPredicted RBP4.41□□□□□ -1.7
CNGA1-203ENST00000420489 PAPSS1O43252 624 aaPredicted RBP4.41□□□□□ -1.7
CNGA1-203ENST00000420489 MARCH6O60337 910 aa4.41□□□□□ -1.7
CNGA1-203ENST00000420489 ADMP35318 185 aa4.41□□□□□ -1.7
CNGA1-203ENST00000420489 ZNF618Q5T7W0 954 aa4.41□□□□□ -1.7
CNGA1-203ENST00000420489 CABP7Q86V35 215 aa4.41□□□□□ -1.7
CNGA1-203ENST00000420489 TP53INP2Q8IXH6 220 aa4.41□□□□□ -1.7
CNGA1-203ENST00000420489 TMTC2Q8N394 836 aa4.41□□□□□ -1.7
CNGA1-203ENST00000420489 CRELD1Q96HD1 420 aa4.41□□□□□ -1.7
CNGA1-203ENST00000420489 FANCD2OSQ96PS1 177 aa4.41□□□□□ -1.7
CNGA1-203ENST00000420489 MIS18AQ9NYP9 233 aa4.41□□□□□ -1.7
CNGA1-203ENST00000420489 COL6A6A6NMZ7 2263 aa4.41□□□□□ -1.7
CNGA1-203ENST00000420489 DLG5Q8TDM6 1919 aa4.41□□□□□ -1.7
CNGA1-203ENST00000420489 PNMA6FA0A0J9YX94 578 aa4.41□□□□□ -1.7
CNGA1-203ENST00000420489 ENPP3O14638 875 aa4.41□□□□□ -1.7
CNGA1-203ENST00000420489 GJB3O75712 270 aa4.41□□□□□ -1.7
CNGA1-203ENST00000420489 CHRNB1P11230 501 aa4.41□□□□□ -1.7
CNGA1-203ENST00000420489 LIG1P18858 919 aa4.41□□□□□ -1.7
CNGA1-203ENST00000420489 SATB1Q01826 763 aa4.41□□□□□ -1.7
CNGA1-203ENST00000420489 AIMP1Q12904 312 aaKnown RBP4.41□□□□□ -1.7
CNGA1-203ENST00000420489 ZNF484Q5JVG2 852 aa4.41□□□□□ -1.7
CNGA1-203ENST00000420489 KANSL1Q7Z3B3 1105 aa4.41□□□□□ -1.7
CNGA1-203ENST00000420489 RNF214Q8ND24 703 aa4.41□□□□□ -1.7
CNGA1-203ENST00000420489 EPS8L3Q8TE67 593 aaKnown RBP4.41□□□□□ -1.7
CNGA1-203ENST00000420489 DDX11Q96FC9 970 aa4.41□□□□□ -1.7
CNGA1-203ENST00000420489 PHACTR3Q96KR7 559 aa4.41□□□□□ -1.7
CNGA1-203ENST00000420489 KRTAP9-2Q9BYQ4 174 aa4.41□□□□□ -1.7
CNGA1-203ENST00000420489 C1GALT1Q9NS00 363 aa4.41□□□□□ -1.7
CNGA1-203ENST00000420489 PPP1R9AQ9ULJ8 1098 aa4.41□□□□□ -1.7
CNGA1-203ENST00000420489 TLX3O43711 291 aaPredicted RBP4.4□□□□□ -1.7
CNGA1-203ENST00000420489 RNGTTO60942 597 aaKnown RBP4.4□□□□□ -1.7
CNGA1-203ENST00000420489 MYL3P08590 195 aa4.4□□□□□ -1.7
CNGA1-203ENST00000420489 ITGB6P18564 788 aa4.4□□□□□ -1.7
CNGA1-203ENST00000420489 HOXA9P31269 272 aa4.4□□□□□ -1.7
CNGA1-203ENST00000420489 PRKAR2BP31323 418 aa4.4□□□□□ -1.7
CNGA1-203ENST00000420489 HNF1BP35680 557 aa4.4□□□□□ -1.7
CNGA1-203ENST00000420489 ILKQ13418 452 aa4.4□□□□□ -1.7
CNGA1-203ENST00000420489 OS9Q13438 667 aaPredicted RBP4.4□□□□□ -1.7
CNGA1-203ENST00000420489 TMEM132BQ14DG7 1078 aa4.4□□□□□ -1.7
CNGA1-203ENST00000420489 IFI16Q16666 785 aaKnown RBP4.4□□□□□ -1.7
CNGA1-203ENST00000420489 DUOXA1Q1HG43 343 aa4.4□□□□□ -1.7
CNGA1-203ENST00000420489 TPRG1Q6ZUI0 275 aa4.4□□□□□ -1.7
CNGA1-203ENST00000420489 CBLL1Q75N03 491 aa4.4□□□□□ -1.7
CNGA1-203ENST00000420489 IPO4Q8TEX9 1081 aaKnown RBP4.4□□□□□ -1.7
CNGA1-203ENST00000420489 EXOC4Q96A65 974 aa4.4□□□□□ -1.7
CNGA1-203ENST00000420489 ELSPBP1Q96BH3 223 aa4.4□□□□□ -1.7
CNGA1-203ENST00000420489 GRAMD1AQ96CP6 724 aa4.4□□□□□ -1.7
CNGA1-203ENST00000420489 ASB16Q96NS5 453 aa4.4□□□□□ -1.7
CNGA1-203ENST00000420489 TTPALQ9BTX7 342 aa4.4□□□□□ -1.7
CNGA1-203ENST00000420489 SSU72Q9NP77 194 aaKnown RBP4.4□□□□□ -1.7
CNGA1-203ENST00000420489 ZNF214Q9UL59 606 aaPredicted RBP4.4□□□□□ -1.7
CNGA1-203ENST00000420489 CDH7Q9ULB5 785 aa4.4□□□□□ -1.7
CNGA1-203ENST00000420489 DENND2AQ9ULE3 1009 aa4.4□□□□□ -1.7
CNGA1-203ENST00000420489 CYP8B1Q9UNU6 501 aa4.4□□□□□ -1.7
CNGA1-203ENST00000420489 KNSTRNQ9Y448 316 aa4.4□□□□□ -1.7
CNGA1-203ENST00000420489 TET1Q8NFU7 2136 aa4.4□□□□□ -1.71
CNGA1-203ENST00000420489 GNAT1P11488 350 aa4.4□□□□□ -1.71
CNGA1-203ENST00000420489 EIF2S2P20042 333 aaKnown RBP4.4□□□□□ -1.71
CNGA1-203ENST00000420489 ERVFC1P60507 584 aa4.4□□□□□ -1.71
CNGA1-203ENST00000420489 CREMQ03060 361 aa4.4□□□□□ -1.71
CNGA1-203ENST00000420489 TMEM62Q0P6H9 643 aa4.4□□□□□ -1.71
CNGA1-203ENST00000420489 DCTN1Q14203 1278 aa4.4□□□□□ -1.71
CNGA1-203ENST00000420489 SV2BQ7L1I2 683 aa4.4□□□□□ -1.71
CNGA1-203ENST00000420489 TMCO2Q7Z6W1 182 aaPredicted RBP4.4□□□□□ -1.71
CNGA1-203ENST00000420489 FAM9BQ8IZU0 186 aa4.4□□□□□ -1.71
CNGA1-203ENST00000420489 ZNF564Q8TBZ8 553 aaPredicted RBP4.4□□□□□ -1.71
CNGA1-203ENST00000420489 MICAL1Q8TDZ2 1067 aa4.4□□□□□ -1.71
CNGA1-203ENST00000420489 KCNB2Q92953 911 aa4.4□□□□□ -1.71
CNGA1-203ENST00000420489 FEZ1Q99689 392 aa4.4□□□□□ -1.71
CNGA1-203ENST00000420489 PNNQ9H307 717 aaKnown RBP4.4□□□□□ -1.71
CNGA1-203ENST00000420489 GNL3LQ9NVN8 582 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms