RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-206ENST00000416651 FNIP2Q9P278 1114 aa9.7□□□□□ -0.86
NIF3L1-206ENST00000416651 RCAN3Q9UKA8 241 aa9.7□□□□□ -0.86
NIF3L1-206ENST00000416651 KLK13Q9UKR3 277 aa9.7□□□□□ -0.86
NIF3L1-206ENST00000416651 PCDHA10Q9Y5I2 948 aa9.7□□□□□ -0.86
NIF3L1-206ENST00000416651 VWA8A3KMH1 1905 aa9.7□□□□□ -0.86
NIF3L1-206ENST00000416651 IGKV6-21A0A0C4DH24 114 aa9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 CDC14CA4D256 554 aa9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 ARL5CA6NH57 179 aa9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 TDRD15B5MCY1 1934 aaKnown RBP9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 SPINT1O43278 529 aa9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 CHMP2AO43633 222 aa9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 EXTL3O43909 919 aa9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 ECI2O75521 394 aa9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 EPN2O95208 641 aa9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 CAPNS1P04632 268 aa9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 PSAPP07602 524 aa9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 VIPR2P41587 438 aa9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 NT5C2P49902 561 aa9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 PABPC1LQ4VXU2 614 aaKnown RBP9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 FAM78AQ5JUQ0 283 aa9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 SH3PXD2AQ5TCZ1 1133 aa9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 RNF43Q68DV7 783 aa9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 ZNF746Q6NUN9 644 aaPredicted RBP9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 VITQ6UXI7 678 aa9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 SV2AQ7L0J3 742 aa9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 CDR2LQ86X02 465 aaPredicted RBP9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 MAP4K3Q8IVH8 894 aa9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 CTCFLQ8NI51 663 aaPredicted RBP9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 LNX1Q8TBB1 728 aaPredicted RBP9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 ATG2BQ96BY7 2078 aa9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 PGBD4Q96DM1 585 aa9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 SCARF2Q96GP6 870 aaPredicted RBP9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 CPB2Q96IY4 423 aa9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 ZNF577Q9BSK1 485 aa9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 LRRC2Q9BYS8 371 aa9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 ZNF334Q9HCZ1 680 aaPredicted RBP9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 RIC8AQ9NPQ8 531 aa9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 DIAPH3Q9NSV4 1193 aa9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 AGPAT5Q9NUQ2 364 aa9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 PGPEP1Q9NXJ5 209 aa9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 KLK14Q9P0G3 267 aa9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 SUCLA2Q9P2R7 463 aaPredicted RBP9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 SAMM50Q9Y512 469 aa9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 IPPQ9Y573 584 aa9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 PIAS3Q9Y6X2 628 aa9.69□□□□□ -0.86
NIF3L1-206ENST00000416651 NAV2Q8IVL1 2488 aa9.68□□□□□ -0.86
NIF3L1-206ENST00000416651 CACNA1EQ15878 2313 aa9.68□□□□□ -0.86
NIF3L1-206ENST00000416651 DCLK1O15075 740 aa9.68□□□□□ -0.86
NIF3L1-206ENST00000416651 PRB1P04280 392 aa9.68□□□□□ -0.86
NIF3L1-206ENST00000416651 RHOP08100 348 aa9.68□□□□□ -0.86
NIF3L1-206ENST00000416651 GJA1P17302 382 aa9.68□□□□□ -0.86
NIF3L1-206ENST00000416651 SFPQP23246 707 aaKnown RBP eCLIP9.68□□□□□ -0.86
NIF3L1-206ENST00000416651 AKAP5P24588 427 aa9.68□□□□□ -0.86
NIF3L1-206ENST00000416651 GDI1P31150 447 aa9.68□□□□□ -0.86
NIF3L1-206ENST00000416651 RAP1GAPP47736 663 aa9.68□□□□□ -0.86
NIF3L1-206ENST00000416651 CBLBQ13191 982 aa9.68□□□□□ -0.86
NIF3L1-206ENST00000416651 COL28A1Q2UY09 1125 aa9.68□□□□□ -0.86
NIF3L1-206ENST00000416651 USP41Q3LFD5 358 aa9.68□□□□□ -0.86
NIF3L1-206ENST00000416651 AXDND1Q5T1B0 1012 aaPredicted RBP9.68□□□□□ -0.86
NIF3L1-206ENST00000416651 PPP1R26Q5T8A7 1209 aaPredicted RBP9.68□□□□□ -0.86
NIF3L1-206ENST00000416651 PLA2G4FQ68DD2 849 aa9.68□□□□□ -0.86
NIF3L1-206ENST00000416651 Q6ZVU0 165 aa9.68□□□□□ -0.86
NIF3L1-206ENST00000416651 PDZD3Q86UT5 571 aa9.68□□□□□ -0.86
NIF3L1-206ENST00000416651 CEP57Q86XR8 500 aa9.68□□□□□ -0.86
NIF3L1-206ENST00000416651 PLEKHM2Q8IWE5 1019 aa9.68□□□□□ -0.86
NIF3L1-206ENST00000416651 ADAM32Q8TC27 787 aa9.68□□□□□ -0.86
NIF3L1-206ENST00000416651 LENG9Q96B70 501 aa9.68□□□□□ -0.86
NIF3L1-206ENST00000416651 FAM117AQ9C073 453 aa9.68□□□□□ -0.86
NIF3L1-206ENST00000416651 BRD9Q9H8M2 597 aa9.68□□□□□ -0.86
NIF3L1-206ENST00000416651 CEP131Q9UPN4 1083 aa9.68□□□□□ -0.86
NIF3L1-206ENST00000416651 SSX2IPQ9Y2D8 614 aa9.68□□□□□ -0.86
NIF3L1-206ENST00000416651 MRPS17Q9Y2R5 130 aaKnown RBP9.68□□□□□ -0.86
NIF3L1-206ENST00000416651 MRPS23Q9Y3D9 190 aaKnown RBP9.68□□□□□ -0.86
NIF3L1-206ENST00000416651 GPSM3Q9Y4H4 160 aa9.68□□□□□ -0.86
NIF3L1-206ENST00000416651 PDCD11Q14690 1871 aaKnown RBP9.68□□□□□ -0.86
NIF3L1-206ENST00000416651 CNTNAP5Q8WYK1 1306 aa9.67□□□□□ -0.86
NIF3L1-206ENST00000416651 ERICH2A1L162 156 aa9.67□□□□□ -0.86
NIF3L1-206ENST00000416651 SMCO2A6NFE2 343 aa9.67□□□□□ -0.86
NIF3L1-206ENST00000416651 PATE3B3GLJ2 98 aa9.67□□□□□ -0.86
NIF3L1-206ENST00000416651 HNRNPA1P09651 372 aaKnown RBP eCLIP9.67□□□□□ -0.86
NIF3L1-206ENST00000416651 SRGAP2CP0DJJ0 459 aa9.67□□□□□ -0.86
NIF3L1-206ENST00000416651 ITGA4P13612 1032 aa9.67□□□□□ -0.86
NIF3L1-206ENST00000416651 SMARCA1P28370 1054 aa9.67□□□□□ -0.86
NIF3L1-206ENST00000416651 MPLP40238 635 aa9.67□□□□□ -0.86
NIF3L1-206ENST00000416651 RAB27AP51159 221 aa9.67□□□□□ -0.86
NIF3L1-206ENST00000416651 NAPAP54920 295 aa9.67□□□□□ -0.86
NIF3L1-206ENST00000416651 B4GALNT3Q6L9W6 998 aa9.67□□□□□ -0.86
NIF3L1-206ENST00000416651 TMTC3Q6ZXV5 915 aa9.67□□□□□ -0.86
NIF3L1-206ENST00000416651 NIPA1Q7RTP0 329 aa9.67□□□□□ -0.86
NIF3L1-206ENST00000416651 WDR5BQ86VZ2 330 aa9.67□□□□□ -0.86
NIF3L1-206ENST00000416651 SPEM1Q8N4L4 309 aa9.67□□□□□ -0.86
NIF3L1-206ENST00000416651 DEFB124Q8NES8 71 aa9.67□□□□□ -0.86
NIF3L1-206ENST00000416651 ELSPBP1Q96BH3 223 aa9.67□□□□□ -0.86
NIF3L1-206ENST00000416651 CRELD1Q96HD1 420 aa9.67□□□□□ -0.86
NIF3L1-206ENST00000416651 EDEM2Q9BV94 578 aa9.67□□□□□ -0.86
NIF3L1-206ENST00000416651 UNC45AQ9H3U1 944 aa9.67□□□□□ -0.86
NIF3L1-206ENST00000416651 NXF3Q9H4D5 531 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-206ENST00000416651 DISC1Q9NRI5 854 aa9.67□□□□□ -0.86
NIF3L1-206ENST00000416651 NRBP2Q9NSY0 501 aa9.67□□□□□ -0.86
NIF3L1-206ENST00000416651 DPP7Q9UHL4 492 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms