RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 ZNF516Q92618 1163 aa33.11■■■□□ 2.89
CSNK1E-206ENST00000413574 TSPAN18Q96SJ8 248 aa33.11■■■□□ 2.89
CSNK1E-206ENST00000413574 CGRRF1Q99675 332 aa33.11■■■□□ 2.89
CSNK1E-206ENST00000413574 MTMR12Q9C0I1 747 aa33.11■■■□□ 2.89
CSNK1E-206ENST00000413574 INTS13Q9NVM9 706 aa33.11■■■□□ 2.89
CSNK1E-206ENST00000413574 RWDD3Q9Y3V2 267 aa33.11■■■□□ 2.89
CSNK1E-206ENST00000413574 SLC16A3O15427 465 aaKnown RBP33.1■■■□□ 2.89
CSNK1E-206ENST00000413574 SLC39A11Q8N1S5 342 aa33.1■■■□□ 2.89
CSNK1E-206ENST00000413574 BEST2Q8NFU1 509 aa33.1■■■□□ 2.89
CSNK1E-206ENST00000413574 HASPINQ8TF76 798 aa33.1■■■□□ 2.89
CSNK1E-206ENST00000413574 MARCH5Q9NX47 278 aa33.1■■■□□ 2.89
CSNK1E-206ENST00000413574 DPP3Q9NY33 737 aa33.1■■■□□ 2.89
CSNK1E-206ENST00000413574 ITGB1P05556 798 aa33.1■■■□□ 2.89
CSNK1E-206ENST00000413574 TRIM49P0CI25 452 aa33.1■■■□□ 2.89
CSNK1E-206ENST00000413574 TRIM49CP0CI26 452 aa33.1■■■□□ 2.89
CSNK1E-206ENST00000413574 VAMP7P51809 220 aa33.1■■■□□ 2.89
CSNK1E-206ENST00000413574 BFSP1Q12934 665 aa33.1■■■□□ 2.89
CSNK1E-206ENST00000413574 UPP1Q16831 310 aa33.1■■■□□ 2.89
CSNK1E-206ENST00000413574 C1orf220Q5T0J3 134 aa33.1■■■□□ 2.89
CSNK1E-206ENST00000413574 INTS8Q75QN2 995 aaKnown RBP33.1■■■□□ 2.89
CSNK1E-206ENST00000413574 WDR49Q8IV35 697 aa33.1■■■□□ 2.89
CSNK1E-206ENST00000413574 RFXAPO00287 272 aa33.09■■■□□ 2.89
CSNK1E-206ENST00000413574 PPEF2O14830 753 aa33.09■■■□□ 2.89
CSNK1E-206ENST00000413574 KIF4AO95239 1232 aa33.09■■■□□ 2.89
CSNK1E-206ENST00000413574 CYP3A5P20815 502 aa33.09■■■□□ 2.89
CSNK1E-206ENST00000413574 TPD52L1Q16890 204 aaPredicted RBP33.09■■■□□ 2.89
CSNK1E-206ENST00000413574 NT5DC4Q86YG4 428 aa33.09■■■□□ 2.89
CSNK1E-206ENST00000413574 C3orf58Q8NDZ4 430 aa33.09■■■□□ 2.89
CSNK1E-206ENST00000413574 FBXO22Q8NEZ5 403 aa33.09■■■□□ 2.89
CSNK1E-206ENST00000413574 FAM161BQ96MY7 647 aa33.09■■■□□ 2.89
CSNK1E-206ENST00000413574 SAMD11Q96NU1 681 aa33.09■■■□□ 2.89
CSNK1E-206ENST00000413574 ALG13Q9NP73 1137 aaKnown RBP33.09■■■□□ 2.89
CSNK1E-206ENST00000413574 SPG21Q9NZD8 308 aa33.09■■■□□ 2.89
CSNK1E-206ENST00000413574 C5orf67F2Z3F1 127 aa33.08■■■□□ 2.89
CSNK1E-206ENST00000413574 PODXLO00592 558 aa33.08■■■□□ 2.89
CSNK1E-206ENST00000413574 XPOTO43592 962 aaKnown RBP33.08■■■□□ 2.89
CSNK1E-206ENST00000413574 TMEM191BP0C7N4 346 aa33.08■■■□□ 2.89
CSNK1E-206ENST00000413574 KRT13P13646 458 aa33.08■■■□□ 2.89
CSNK1E-206ENST00000413574 SCN1AP35498 2009 aa33.08■■■□□ 2.89
CSNK1E-206ENST00000413574 HSP90AA4PQ58FG1 418 aa33.08■■■□□ 2.89
CSNK1E-206ENST00000413574 C1orf127Q8N9H9 656 aa33.08■■■□□ 2.89
CSNK1E-206ENST00000413574 TMC2Q8TDI7 906 aa33.08■■■□□ 2.89
CSNK1E-206ENST00000413574 IGSF21Q96ID5 467 aa33.08■■■□□ 2.89
CSNK1E-206ENST00000413574 COL4A4P53420 1690 aaPredicted RBP33.08■■■□□ 2.89
CSNK1E-206ENST00000413574 FGF18O76093 207 aa33.07■■■□□ 2.88
CSNK1E-206ENST00000413574 DUOXA2Q1HG44 320 aa33.07■■■□□ 2.88
CSNK1E-206ENST00000413574 CCDC40Q4G0X9 1142 aa33.07■■■□□ 2.88
CSNK1E-206ENST00000413574 IRF2BP1Q8IU81 584 aa33.07■■■□□ 2.88
CSNK1E-206ENST00000413574 CACTINQ8WUQ7 758 aaKnown RBP33.07■■■□□ 2.88
CSNK1E-206ENST00000413574 UROC1Q96N76 676 aa33.07■■■□□ 2.88
CSNK1E-206ENST00000413574 PLVAPQ9BX97 442 aa33.07■■■□□ 2.88
CSNK1E-206ENST00000413574 ARMCX3Q9UH62 379 aaPredicted RBP33.07■■■□□ 2.88
CSNK1E-206ENST00000413574 LRPAP1P30533 357 aa33.06■■■□□ 2.88
CSNK1E-206ENST00000413574 CLDN10P78369 228 aa33.06■■■□□ 2.88
CSNK1E-206ENST00000413574 CD300LGQ6UXG3 332 aa33.06■■■□□ 2.88
CSNK1E-206ENST00000413574 ENOX1Q8TC92 643 aaKnown RBP33.06■■■□□ 2.88
CSNK1E-206ENST00000413574 ANKRD36BP1Q96IX9 119 aa33.06■■■□□ 2.88
CSNK1E-206ENST00000413574 COLEC11Q9BWP8 271 aa33.06■■■□□ 2.88
CSNK1E-206ENST00000413574 B3GAT3O94766 335 aa33.06■■■□□ 2.88
CSNK1E-206ENST00000413574 ITGB3P05106 788 aa33.06■■■□□ 2.88
CSNK1E-206ENST00000413574 RB1P06400 928 aa33.06■■■□□ 2.88
CSNK1E-206ENST00000413574 FXR1P51114 621 aaKnown RBP eCLIP33.06■■■□□ 2.88
CSNK1E-206ENST00000413574 ZNF697Q5TEC3 545 aa33.06■■■□□ 2.88
CSNK1E-206ENST00000413574 C9orf57Q5W0N0 161 aa33.06■■■□□ 2.88
CSNK1E-206ENST00000413574 GDPD5Q8WTR4 605 aa33.06■■■□□ 2.88
CSNK1E-206ENST00000413574 SAMSN1Q9NSI8 373 aaKnown RBP33.06■■■□□ 2.88
CSNK1E-206ENST00000413574 NFE2L3Q9Y4A8 694 aa33.06■■■□□ 2.88
CSNK1E-206ENST00000413574 TMEM265A0A087WTH1 108 aa33.05■■■□□ 2.88
CSNK1E-206ENST00000413574 FGFR1OPO95684 399 aaKnown RBP33.05■■■□□ 2.88
CSNK1E-206ENST00000413574 TNNC2P02585 160 aa33.05■■■□□ 2.88
CSNK1E-206ENST00000413574 RPL9P32969 192 aaKnown RBP33.05■■■□□ 2.88
CSNK1E-206ENST00000413574 GPM6BQ13491 265 aa33.05■■■□□ 2.88
CSNK1E-206ENST00000413574 GRIN2CQ14957 1233 aa33.05■■■□□ 2.88
CSNK1E-206ENST00000413574 DCLRE1AQ6PJP8 1040 aa33.05■■■□□ 2.88
CSNK1E-206ENST00000413574 FRMD5Q7Z6J6 570 aa33.05■■■□□ 2.88
CSNK1E-206ENST00000413574 CREBRFQ8IUR6 639 aa33.05■■■□□ 2.88
CSNK1E-206ENST00000413574 DDX27Q96GQ7 796 aaKnown RBP33.05■■■□□ 2.88
CSNK1E-206ENST00000413574 MMRN2Q9H8L6 949 aa33.05■■■□□ 2.88
CSNK1E-206ENST00000413574 PPM1AP35813 382 aa33.04■■■□□ 2.88
CSNK1E-206ENST00000413574 PPP3CAQ08209 521 aa33.04■■■□□ 2.88
CSNK1E-206ENST00000413574 DCAF17Q5H9S7 520 aaPredicted RBP33.04■■■□□ 2.88
CSNK1E-206ENST00000413574 Q7L0L9 218 aa33.04■■■□□ 2.88
CSNK1E-206ENST00000413574 TRAPPC11Q7Z392 1133 aa33.04■■■□□ 2.88
CSNK1E-206ENST00000413574 CXorf38Q8TB03 319 aa33.04■■■□□ 2.88
CSNK1E-206ENST00000413574 TMEM169Q96HH4 297 aa33.04■■■□□ 2.88
CSNK1E-206ENST00000413574 CNOT6LQ96LI5 555 aaKnown RBP33.04■■■□□ 2.88
CSNK1E-206ENST00000413574 C11orf84Q9BUA3 381 aaPredicted RBP33.04■■■□□ 2.88
CSNK1E-206ENST00000413574 VN1R3Q9BXE9 311 aa33.04■■■□□ 2.88
CSNK1E-206ENST00000413574 SIX4Q9UIU6 781 aa33.04■■■□□ 2.88
CSNK1E-206ENST00000413574 ADAM28Q9UKQ2 775 aa33.04■■■□□ 2.88
CSNK1E-206ENST00000413574 ANO9A1A5B4 782 aa33.03■■■□□ 2.88
CSNK1E-206ENST00000413574 H3BNC9 293 aa33.03■■■□□ 2.88
CSNK1E-206ENST00000413574 GRM6O15303 877 aa33.03■■■□□ 2.88
CSNK1E-206ENST00000413574 TADA2AO75478 443 aa33.03■■■□□ 2.88
CSNK1E-206ENST00000413574 CSPG5O95196 566 aa33.03■■■□□ 2.88
CSNK1E-206ENST00000413574 POLR2BP30876 1174 aaKnown RBP33.03■■■□□ 2.88
CSNK1E-206ENST00000413574 TCERG1LQ5VWI1 586 aa33.03■■■□□ 2.88
CSNK1E-206ENST00000413574 AOPEPQ8N6M6 819 aa33.03■■■□□ 2.88
CSNK1E-206ENST00000413574 NAT10Q9H0A0 1025 aaKnown RBP33.03■■■□□ 2.88
CSNK1E-206ENST00000413574 PIRO00625 290 aa33.02■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms