RNA–Protein interactions for RNA: ENST00000411034.1

SNORA40.8-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.8-201ENST00000411034 Q8NA96 180 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 BEND2Q8NDZ0 799 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 CPEB3Q8NE35 698 aaKnown RBP0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 ABCF1Q8NE71 845 aaKnown RBP eCLIP0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 TBC1D15Q8TC07 691 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 PROKR1Q8TCW9 393 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 STAG1Q8WVM7 1258 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 ASB10Q8WXI3 467 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 SSH1Q8WYL5 1049 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 LINC00476Q8WZB0 136 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 KAT5Q92993 513 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 FUBP1Q96AE4 644 aaKnown RBP0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 NACC2Q96BF6 587 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 COA7Q96BR5 231 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 CYFIP2Q96F07 1278 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 MARS2Q96GW9 593 aaKnown RBP0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 LRIG1Q96JA1 1093 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 TMX3Q96JJ7 454 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 KLHL32Q96NJ5 620 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 FAM193BQ96PV7 902 aaPredicted RBP0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 CEP89Q96ST8 783 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 SMAD5Q99717 465 aaKnown RBP0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 PRRX2Q99811 253 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 C7orf25Q9BPX7 421 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 VKORC1Q9BQB6 163 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 ZSWIM1Q9BR11 485 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 TTPALQ9BTX7 342 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 TLR10Q9BXR5 811 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 ALOXE3Q9BYJ1 711 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 KRTAP17-1Q9BYP8 105 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 WDR11Q9BZH6 1224 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 SLC13A1Q9BZW2 595 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 BRINP2Q9C0B6 783 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 C11orf54Q9H0W9 315 aaPredicted RBP0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 SERHL2Q9H4I8 314 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 PRDM13Q9H4Q3 707 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 GSTO2Q9H4Y5 243 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 SLITRK6Q9H5Y7 841 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 MANSC1Q9H8J5 431 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 TMEM74BQ9NUR3 256 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 TDP1Q9NUW8 608 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 TMEM140Q9NV12 185 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 MKS1Q9NXB0 559 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 POGKQ9P215 609 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 CTTNBP2NLQ9P2B4 639 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 HSFX1Q9UBD0 423 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 NIPSNAP3AQ9UFN0 247 aaPredicted RBP0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 USP25Q9UHP3 1055 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 PACSIN3Q9UKS6 424 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 INTUQ9ULD6 942 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 SLC45A2Q9UMX9 530 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 CLCA2Q9UQC9 943 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 RUVBL1Q9Y265 456 aaKnown RBP0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 ZBTB32Q9Y2Y4 487 aaPredicted RBP0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 USP15Q9Y4E8 981 aaPredicted RBP0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 PCDHB1Q9Y5F3 818 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 COL4A3BPQ9Y5P4 624 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 DMRT1Q9Y5R6 373 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 EPN1Q9Y6I3 576 aaPredicted RBP0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 FPGT-TNNI3KV9GXZ4 949 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 AATKQ6ZMQ8 1374 aa0.66□□□□□ -2.3
SNORA40.8-201ENST00000411034 SALL3Q9BXA9 1300 aa0.65□□□□□ -2.3
SNORA40.8-201ENST00000411034 WDR33Q9C0J8 1336 aaKnown RBP0.65□□□□□ -2.3
SNORA40.8-201ENST00000411034 PRAMEF33A0A0G2JMD5 474 aa0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 A0A1W2PS29 197 aa0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 ANKRD62A6NC57 917 aa0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 TMEM191CA6NGB0 347 aa0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 LRRC14BA6NHZ5 514 aa0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 ALG1L2C9J202 215 aa0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 OVOL3O00110 214 aa0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 F2RL2O00254 374 aa0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 MGST3O14880 152 aa0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 TEX33O43247 280 aa0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 B3GALT2O43825 422 aa0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 PRAMEF10O60809 474 aa0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 RAMP2O60895 175 aa0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 PPFIA4O75335 1185 aa0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 SLC43A1O75387 559 aa0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 CDKL5O76039 1030 aa0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 SUN1O94901 812 aa0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 HAUS5O94927 633 aa0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 ABLIM3O94929 683 aa0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 AGFG2O95081 481 aa0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 MATN4O95460 622 aa0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 GPANK1O95872 356 aa0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 FOSP01100 380 aaPredicted RBP0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 LMNAP02545 664 aaKnown RBP0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 CD1AP06126 327 aa0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 POU2F2P09086 479 aa0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 SPATA31D3P0C874 917 aa0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 HKR1P10072 659 aa0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 PF4V1P10720 104 aa0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 ITGAMP11215 1152 aa0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 MTHFD1P11586 935 aaKnown RBP0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 ALAS1P13196 640 aa0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 PDCP20941 246 aa0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 MALP21145 153 aa0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 BMP5P22003 454 aa0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 LPOP22079 712 aaPredicted RBP0.65□□□□□ -2.31
SNORA40.8-201ENST00000411034 PRDX5P30044 214 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms