RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 SETDB2Q96T68 719 aa13.56□□□□□ -0.24
HERC3-203ENST00000407637 TIMMDC1Q9NPL8 285 aa13.56□□□□□ -0.24
HERC3-203ENST00000407637 ARHGEF4Q9NR80 690 aa13.56□□□□□ -0.24
HERC3-203ENST00000407637 ARMCX1Q9P291 453 aa13.56□□□□□ -0.24
HERC3-203ENST00000407637 EFR3BQ9Y2G0 817 aa13.56□□□□□ -0.24
HERC3-203ENST00000407637 CICQ96RK0 1608 aaPredicted RBP13.56□□□□□ -0.24
HERC3-203ENST00000407637 A0A1B0GUL6 1792 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 C2orf71A6NGG8 1288 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 MIF4GDA9UHW6 222 aaKnown RBP13.55□□□□□ -0.24
HERC3-203ENST00000407637 TXNDC9O14530 226 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 PDE5AO76074 875 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 PIM1P11309 404 aaPredicted RBP13.55□□□□□ -0.24
HERC3-203ENST00000407637 PCSK6P29122 969 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 STAT1P42224 750 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 SERPINB8P50452 374 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 RAP1GDS1P52306 607 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 ARFIP2P53365 341 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 AQP4P55087 323 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 PKN2Q16513 984 aaKnown RBP13.55□□□□□ -0.24
HERC3-203ENST00000407637 GRAMD4Q6IC98 578 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 C1orf228Q6PIY5 440 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 LVRNQ6Q4G3 990 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 ARHGAP24Q8N264 748 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 ZBTB38Q8NAP3 1195 aaPredicted RBP13.55□□□□□ -0.24
HERC3-203ENST00000407637 FNDC8Q8TC99 324 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 ZNF398Q8TD17 642 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 RSPH1Q8WYR4 309 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 DCAF5Q96JK2 942 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 TUBB6Q9BUF5 446 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 DNAJC18Q9H819 358 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 BARHL2Q9NY43 387 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 ASAP1Q9ULH1 1129 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 NIP7Q9Y221 180 aaKnown RBP eCLIP13.55□□□□□ -0.24
HERC3-203ENST00000407637 TNS3Q68CZ2 1445 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 TMEM247A6NEH6 219 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 F8W8V4 182 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 H3BRJ5 948 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 ATMINO43313 823 aaPredicted RBP13.55□□□□□ -0.24
HERC3-203ENST00000407637 SLC5A1P13866 664 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 KRT15P19012 456 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 YY1P25490 414 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 CTSWP56202 376 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 STAT4Q14765 748 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 CCDC65Q8IXS2 484 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 PRPF31Q8WWY3 499 aaKnown RBP13.55□□□□□ -0.24
HERC3-203ENST00000407637 ARHGEF1Q92888 912 aaKnown RBP13.55□□□□□ -0.24
HERC3-203ENST00000407637 SKA1Q96BD8 255 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 FAM81BQ96LP2 452 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 CCDC77Q9BR77 488 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 STK33Q9BYT3 514 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 OSBPL8Q9BZF1 889 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 KIAA1586Q9HCI6 787 aa13.55□□□□□ -0.24
HERC3-203ENST00000407637 EXOC1LA0A1B0GW35 172 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 GSTTP1A0A1W2PQM5 241 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 CYTH3O43739 400 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 XRCC5P13010 732 aaKnown RBP13.54□□□□□ -0.24
HERC3-203ENST00000407637 IDO1P14902 403 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 UQCRBP14927 111 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 PORP16435 677 aaPredicted RBP13.54□□□□□ -0.24
HERC3-203ENST00000407637 ITIH2P19823 946 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 COMTP21964 271 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 GCAP28676 217 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 BCAMP50895 628 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 ASPHQ12797 758 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 PDK3Q15120 406 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 CALCRLQ16602 461 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 USH1GQ495M9 461 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 LPCAT4Q643R3 524 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 LMOD2Q6P5Q4 547 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 NET1Q7Z628 596 aaPredicted RBP13.54□□□□□ -0.24
HERC3-203ENST00000407637 DGKHQ86XP1 1220 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 METTL25Q8N6Q8 603 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 TBCKQ8TEA7 893 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 MRRFQ96E11 262 aaKnown RBP13.54□□□□□ -0.24
HERC3-203ENST00000407637 FAIMQ9NVQ4 179 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 R3HDM2Q9Y2K5 976 aaKnown RBP13.54□□□□□ -0.24
HERC3-203ENST00000407637 HEY1Q9Y5J3 304 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 C15orf38-AP3S2A0A0A6YYH1 394 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 USP17L12C9JPN9 530 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 USP17L21D6R901 530 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 POC1B-GALNT4F8VUJ3 575 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 CIB2O75838 187 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 CHN2P52757 468 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 NR1H3Q13133 447 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 MESDQ14696 234 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 NADK2Q4G0N4 442 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 TMEM119Q4V9L6 283 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 SPTY2D1Q68D10 685 aaPredicted RBP13.54□□□□□ -0.24
HERC3-203ENST00000407637 CC2D2BQ6DHV5 1058 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 KRT25Q7Z3Z0 450 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 ARPINQ7Z6K5 226 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 TMEM110Q86TL2 294 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 ZC3H3Q8IXZ2 948 aaKnown RBP13.54□□□□□ -0.24
HERC3-203ENST00000407637 ZBED8Q8IZ13 594 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 MKNK1Q9BUB5 465 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 TMEM120AQ9BXJ8 343 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 ZDHHC7Q9NXF8 308 aa13.54□□□□□ -0.24
HERC3-203ENST00000407637 SMG5Q9UPR3 1016 aaKnown RBP13.54□□□□□ -0.24
HERC3-203ENST00000407637 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.54□□□□□ -0.24
HERC3-203ENST00000407637 PCDHA2Q9Y5H9 948 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms