RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 GGCXP38435 758 aa14.93□□□□□ -0.02
SCAF4-202ENST00000399804 ZSCAN26Q16670 478 aa14.93□□□□□ -0.02
SCAF4-202ENST00000399804 FOXR2Q6PJQ5 311 aa14.93□□□□□ -0.02
SCAF4-202ENST00000399804 C18orf8Q96DM3 657 aa14.93□□□□□ -0.02
SCAF4-202ENST00000399804 RBM41Q96IZ5 413 aaKnown RBP14.93□□□□□ -0.02
SCAF4-202ENST00000399804 SLITRK6Q9H5Y7 841 aa14.93□□□□□ -0.02
SCAF4-202ENST00000399804 ABCA3Q99758 1704 aa14.93□□□□□ -0.02
SCAF4-202ENST00000399804 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.93□□□□□ -0.02
SCAF4-202ENST00000399804 PI4K2BG5E9Z4 385 aa14.93□□□□□ -0.02
SCAF4-202ENST00000399804 PPP2R5DQ14738 602 aa14.93□□□□□ -0.02
SCAF4-202ENST00000399804 ZRSR2Q15696 482 aaKnown RBP14.93□□□□□ -0.02
SCAF4-202ENST00000399804 KYAT1Q16773 422 aa14.93□□□□□ -0.02
SCAF4-202ENST00000399804 ZCWPW2Q504Y3 356 aa14.93□□□□□ -0.02
SCAF4-202ENST00000399804 GJC2Q5T442 439 aaPredicted RBP14.93□□□□□ -0.02
SCAF4-202ENST00000399804 MPZL3Q6UWV2 235 aa14.93□□□□□ -0.02
SCAF4-202ENST00000399804 SIX6OS1Q8N1H7 587 aa14.93□□□□□ -0.02
SCAF4-202ENST00000399804 ASAP3Q8TDY4 903 aa14.93□□□□□ -0.02
SCAF4-202ENST00000399804 PORCNQ9H237 461 aa14.93□□□□□ -0.02
SCAF4-202ENST00000399804 GTF3C4Q9UKN8 822 aa14.93□□□□□ -0.02
SCAF4-202ENST00000399804 OPLAHO14841 1288 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 TTI1O43156 1089 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 RARBP10826 455 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 KRT3P12035 628 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 CHRNA3P32297 505 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 GPAT2Q6NUI2 795 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 METTL23Q86XA0 190 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 USP38Q8NB14 1042 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 BCAS4Q8TDM0 211 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 NACA2Q9H009 215 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 ZNF446Q9NWS9 450 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 ANKRD36CQ5JPF3 1778 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 RRN3P2A6NIE6 340 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 ITGB3P05106 788 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 BRD2P25440 801 aaKnown RBP14.92□□□□□ -0.02
SCAF4-202ENST00000399804 ADCYAP1R1P41586 468 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 C10orf67Q8IYJ2 551 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 BTBD6Q96KE9 485 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 TEPSINQ96N21 525 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 GANQ9H2C0 597 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 IFT122Q9HBG6 1241 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 KLHL11Q9NVR0 708 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 NFASCO94856 1347 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 SPDYE5A6NIY4 337 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 NDC80O14777 642 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 IL18RAPO95256 599 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 ADRB2P07550 413 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 GLRA2P23416 452 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 CDC42EP1Q00587 391 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 SPOUT1Q5T280 376 aaKnown RBP14.92□□□□□ -0.02
SCAF4-202ENST00000399804 CCDC121Q6ZUS5 278 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 BTBD7Q9P203 1132 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 ADAM21Q9UKJ8 722 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 PLAAQ9Y263 795 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 SNCAIPQ9Y6H5 919 aa14.92□□□□□ -0.02
SCAF4-202ENST00000399804 LRRIQ3A6PVS8 624 aaPredicted RBP14.91□□□□□ -0.02
SCAF4-202ENST00000399804 POC1B-GALNT4F8VUJ3 575 aa14.91□□□□□ -0.02
SCAF4-202ENST00000399804 MYL6P60660 151 aa14.91□□□□□ -0.02
SCAF4-202ENST00000399804 MKRN4PQ13434 485 aaPredicted RBP14.91□□□□□ -0.02
SCAF4-202ENST00000399804 ACAD10Q6JQN1 1059 aa14.91□□□□□ -0.02
SCAF4-202ENST00000399804 DARS2Q6PI48 645 aaKnown RBP14.91□□□□□ -0.02
SCAF4-202ENST00000399804 SLC9A9Q8IVB4 645 aa14.91□□□□□ -0.02
SCAF4-202ENST00000399804 TSNARE1Q96NA8 513 aa14.91□□□□□ -0.02
SCAF4-202ENST00000399804 CGRRF1Q99675 332 aa14.91□□□□□ -0.02
SCAF4-202ENST00000399804 SEPT10Q9P0V9 454 aa14.91□□□□□ -0.02
SCAF4-202ENST00000399804 REXO2Q9Y3B8 237 aaKnown RBP14.91□□□□□ -0.02
SCAF4-202ENST00000399804 ADORA2BP29275 332 aa14.91□□□□□ -0.02
SCAF4-202ENST00000399804 BASP1P80723 227 aaKnown RBP14.91□□□□□ -0.02
SCAF4-202ENST00000399804 ARHGEF6Q15052 776 aa14.91□□□□□ -0.02
SCAF4-202ENST00000399804 ACP6Q9NPH0 428 aa14.91□□□□□ -0.02
SCAF4-202ENST00000399804 SETD4Q9NVD3 440 aa14.91□□□□□ -0.02
SCAF4-202ENST00000399804 ZNF536O15090 1300 aa14.91□□□□□ -0.02
SCAF4-202ENST00000399804 RAD51CO43502 376 aa14.91□□□□□ -0.02
SCAF4-202ENST00000399804 ACSL3O95573 720 aa14.91□□□□□ -0.02
SCAF4-202ENST00000399804 PRLRP16471 622 aa14.91□□□□□ -0.02
SCAF4-202ENST00000399804 CARSP49589 748 aaKnown RBP14.91□□□□□ -0.02
SCAF4-202ENST00000399804 SLMAPQ14BN4 828 aa14.91□□□□□ -0.02
SCAF4-202ENST00000399804 PHLDB3Q6NSJ2 640 aa14.91□□□□□ -0.02
SCAF4-202ENST00000399804 HPDLQ96IR7 371 aa14.91□□□□□ -0.02
SCAF4-202ENST00000399804 TLR10Q9BXR5 811 aa14.91□□□□□ -0.02
SCAF4-202ENST00000399804 WRAP73Q9P2S5 460 aaPredicted RBP14.91□□□□□ -0.02
SCAF4-202ENST00000399804 DMGDHQ9UI17 866 aaKnown RBP14.91□□□□□ -0.02
SCAF4-202ENST00000399804 ZC3H11AO75152 810 aaKnown RBP eCLIP14.9□□□□□ -0.02
SCAF4-202ENST00000399804 GZMAP12544 262 aa14.9□□□□□ -0.02
SCAF4-202ENST00000399804 RGS7P49802 495 aa14.9□□□□□ -0.02
SCAF4-202ENST00000399804 ATP11AP98196 1134 aa14.9□□□□□ -0.02
SCAF4-202ENST00000399804 GLRA4Q5JXX5 417 aa14.9□□□□□ -0.02
SCAF4-202ENST00000399804 CELF3Q5SZQ8 465 aaKnown RBP14.9□□□□□ -0.02
SCAF4-202ENST00000399804 ABHD15Q6UXT9 468 aa14.9□□□□□ -0.02
SCAF4-202ENST00000399804 RSRC2Q7L4I2 434 aaKnown RBP14.9□□□□□ -0.02
SCAF4-202ENST00000399804 MMGT1Q8N4V1 131 aa14.9□□□□□ -0.02
SCAF4-202ENST00000399804 CYFIP2Q96F07 1278 aa14.9□□□□□ -0.02
SCAF4-202ENST00000399804 CPB2Q96IY4 423 aa14.9□□□□□ -0.02
SCAF4-202ENST00000399804 ASNSD1Q9NWL6 643 aa14.9□□□□□ -0.02
SCAF4-202ENST00000399804 NOVA2Q9UNW9 492 aaKnown RBP14.9□□□□□ -0.02
SCAF4-202ENST00000399804 CCDC88AQ3V6T2 1871 aa14.9□□□□□ -0.02
SCAF4-202ENST00000399804 HGSO14964 777 aaPredicted RBP14.9□□□□□ -0.02
SCAF4-202ENST00000399804 ZNF862O60290 1169 aa14.9□□□□□ -0.02
SCAF4-202ENST00000399804 NPTXRO95502 500 aa14.9□□□□□ -0.02
SCAF4-202ENST00000399804 H2AFXP16104 143 aaPredicted RBP14.9□□□□□ -0.02
SCAF4-202ENST00000399804 KCNA2P16389 499 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms