RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 TRIM5Q9C035 493 aa9.65□□□□□ -0.86
BRCC3-206ENST00000399042 INTS13Q9NVM9 706 aa9.65□□□□□ -0.86
BRCC3-206ENST00000399042 DPP3Q9NY33 737 aa9.65□□□□□ -0.86
BRCC3-206ENST00000399042 CXXC1Q9P0U4 656 aaPredicted RBP9.65□□□□□ -0.86
BRCC3-206ENST00000399042 DERAQ9Y315 318 aa9.65□□□□□ -0.86
BRCC3-206ENST00000399042 C2CD2Q9Y426 696 aa9.65□□□□□ -0.86
BRCC3-206ENST00000399042 INSL6Q9Y581 213 aa9.65□□□□□ -0.86
BRCC3-206ENST00000399042 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.65□□□□□ -0.86
BRCC3-206ENST00000399042 TTC26A0AVF1 554 aa9.64□□□□□ -0.87
BRCC3-206ENST00000399042 CASTOR2A6NHX0 329 aa9.64□□□□□ -0.87
BRCC3-206ENST00000399042 LRRIQ3A6PVS8 624 aaPredicted RBP9.64□□□□□ -0.87
BRCC3-206ENST00000399042 FAM189A1O60320 539 aa9.64□□□□□ -0.87
BRCC3-206ENST00000399042 ZC3H11AO75152 810 aaKnown RBP eCLIP9.64□□□□□ -0.87
BRCC3-206ENST00000399042 ALDH2P05091 517 aa9.64□□□□□ -0.87
BRCC3-206ENST00000399042 GTF2H1P32780 548 aa9.64□□□□□ -0.87
BRCC3-206ENST00000399042 ALDH7A1P49419 539 aaKnown RBP9.64□□□□□ -0.87
BRCC3-206ENST00000399042 COPB1P53618 953 aaKnown RBP9.64□□□□□ -0.87
BRCC3-206ENST00000399042 UBASH3AP57075 661 aa9.64□□□□□ -0.87
BRCC3-206ENST00000399042 DLG4P78352 724 aa9.64□□□□□ -0.87
BRCC3-206ENST00000399042 RBP5P82980 135 aa9.64□□□□□ -0.87
BRCC3-206ENST00000399042 FANCCQ00597 558 aa9.64□□□□□ -0.87
BRCC3-206ENST00000399042 MYL7Q01449 175 aa9.64□□□□□ -0.87
BRCC3-206ENST00000399042 KCNH2Q12809 1159 aa9.64□□□□□ -0.87
BRCC3-206ENST00000399042 MYO1EQ12965 1108 aa9.64□□□□□ -0.87
BRCC3-206ENST00000399042 NCAPHQ15003 741 aa9.64□□□□□ -0.87
BRCC3-206ENST00000399042 CLLU1OSQ5K130 101 aa9.64□□□□□ -0.87
BRCC3-206ENST00000399042 C9orf50Q5SZB4 431 aa9.64□□□□□ -0.87
BRCC3-206ENST00000399042 CDKAL1Q5VV42 579 aa9.64□□□□□ -0.87
BRCC3-206ENST00000399042 KRT39Q6A163 491 aa9.64□□□□□ -0.87
BRCC3-206ENST00000399042 GAS2L3Q86XJ1 694 aa9.64□□□□□ -0.87
BRCC3-206ENST00000399042 HERC6Q8IVU3 1022 aa9.64□□□□□ -0.87
BRCC3-206ENST00000399042 TRIM59Q8IWR1 403 aa9.64□□□□□ -0.87
BRCC3-206ENST00000399042 ZC3H3Q8IXZ2 948 aaKnown RBP9.64□□□□□ -0.87
BRCC3-206ENST00000399042 FIBCD1Q8N539 461 aa9.64□□□□□ -0.87
BRCC3-206ENST00000399042 RSPH1Q8WYR4 309 aa9.64□□□□□ -0.87
BRCC3-206ENST00000399042 C18orf25Q96B23 403 aaPredicted RBP9.64□□□□□ -0.87
BRCC3-206ENST00000399042 RAD9AQ99638 391 aa9.64□□□□□ -0.87
BRCC3-206ENST00000399042 MTMR12Q9C0I1 747 aa9.64□□□□□ -0.87
BRCC3-206ENST00000399042 NDST4Q9H3R1 872 aa9.64□□□□□ -0.87
BRCC3-206ENST00000399042 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.64□□□□□ -0.872e-6■■■■■ 96.1
BRCC3-206ENST00000399042 AAASQ9NRG9 546 aa9.64□□□□□ -0.87
BRCC3-206ENST00000399042 CNTN3Q9P232 1028 aa9.64□□□□□ -0.87
BRCC3-206ENST00000399042 MSRAQ9UJ68 235 aa9.64□□□□□ -0.87
BRCC3-206ENST00000399042 AGAP1Q9UPQ3 857 aa9.64□□□□□ -0.87
BRCC3-206ENST00000399042 NUB1Q9Y5A7 615 aa9.64□□□□□ -0.87
BRCC3-206ENST00000399042 PCDHGA4Q9Y5G9 962 aa9.64□□□□□ -0.87
BRCC3-206ENST00000399042 TADA2AO75478 443 aa9.63□□□□□ -0.87
BRCC3-206ENST00000399042 DGKIO75912 1065 aa9.63□□□□□ -0.87
BRCC3-206ENST00000399042 GJB5O95377 273 aa9.63□□□□□ -0.87
BRCC3-206ENST00000399042 ITGB3P05106 788 aa9.63□□□□□ -0.87
BRCC3-206ENST00000399042 KCNE1P15382 129 aa9.63□□□□□ -0.87
BRCC3-206ENST00000399042 POLR2BP30876 1174 aaKnown RBP9.63□□□□□ -0.87
BRCC3-206ENST00000399042 RPL9P32969 192 aaKnown RBP9.63□□□□□ -0.87
BRCC3-206ENST00000399042 FMO5P49326 533 aa9.63□□□□□ -0.87
BRCC3-206ENST00000399042 GUCY2FP51841 1108 aa9.63□□□□□ -0.87
BRCC3-206ENST00000399042 TUSC3Q13454 348 aa9.63□□□□□ -0.87
BRCC3-206ENST00000399042 NCOA4Q13772 614 aa9.63□□□□□ -0.87
BRCC3-206ENST00000399042 UVSSAQ2YD98 709 aa9.63□□□□□ -0.87
BRCC3-206ENST00000399042 ARSIQ5FYB1 569 aa9.63□□□□□ -0.87
BRCC3-206ENST00000399042 ALKAL1Q6UXT8 129 aa9.63□□□□□ -0.87
BRCC3-206ENST00000399042 GBP6Q6ZN66 633 aa9.63□□□□□ -0.87
BRCC3-206ENST00000399042 TRAPPC11Q7Z392 1133 aa9.63□□□□□ -0.87
BRCC3-206ENST00000399042 IRF2BP1Q8IU81 584 aa9.63□□□□□ -0.87
BRCC3-206ENST00000399042 DRC7Q8IY82 874 aa9.63□□□□□ -0.87
BRCC3-206ENST00000399042 OR5B17Q8NGF7 314 aa9.63□□□□□ -0.87
BRCC3-206ENST00000399042 VWCEQ96DN2 955 aa9.63□□□□□ -0.87
BRCC3-206ENST00000399042 UROC1Q96N76 676 aa9.63□□□□□ -0.87
BRCC3-206ENST00000399042 ZMAT2Q96NC0 199 aaKnown RBP9.63□□□□□ -0.87
BRCC3-206ENST00000399042 CASD1Q96PB1 797 aa9.63□□□□□ -0.87
BRCC3-206ENST00000399042 COLEC11Q9BWP8 271 aa9.63□□□□□ -0.87
BRCC3-206ENST00000399042 TMEM8AQ9HCN3 771 aa9.63□□□□□ -0.87
BRCC3-206ENST00000399042 TBC1D13Q9NVG8 400 aa9.63□□□□□ -0.87
BRCC3-206ENST00000399042 WDR70Q9NW82 654 aa9.63□□□□□ -0.87
BRCC3-206ENST00000399042 IFNKQ9P0W0 207 aa9.63□□□□□ -0.87
BRCC3-206ENST00000399042 TUBGCP4Q9UGJ1 667 aa9.63□□□□□ -0.87
BRCC3-206ENST00000399042 LIMA1Q9UHB6 759 aaKnown RBP9.63□□□□□ -0.87
BRCC3-206ENST00000399042 ITGA11Q9UKX5 1188 aa9.63□□□□□ -0.87
BRCC3-206ENST00000399042 FAN1Q9Y2M0 1017 aa9.63□□□□□ -0.87
BRCC3-206ENST00000399042 PRG3Q9Y2Y8 225 aaPredicted RBP9.63□□□□□ -0.87
BRCC3-206ENST00000399042 PCDHB12Q9Y5F1 795 aa9.63□□□□□ -0.87
BRCC3-206ENST00000399042 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.62□□□□□ -0.87
BRCC3-206ENST00000399042 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.62□□□□□ -0.87
BRCC3-206ENST00000399042 PODXLO00592 558 aa9.62□□□□□ -0.87
BRCC3-206ENST00000399042 PTGESO14684 152 aa9.62□□□□□ -0.87
BRCC3-206ENST00000399042 B3GAT3O94766 335 aa9.62□□□□□ -0.87
BRCC3-206ENST00000399042 P4HA1P13674 534 aa9.62□□□□□ -0.87
BRCC3-206ENST00000399042 ZNF18P17022 549 aa9.62□□□□□ -0.87
BRCC3-206ENST00000399042 CYP3A5P20815 502 aa9.62□□□□□ -0.87
BRCC3-206ENST00000399042 CA8P35219 290 aa9.62□□□□□ -0.87
BRCC3-206ENST00000399042 AFF1P51825 1210 aaKnown RBP9.62□□□□□ -0.87
BRCC3-206ENST00000399042 RABGGTBP53611 331 aa9.62□□□□□ -0.87
BRCC3-206ENST00000399042 MARSP56192 900 aaKnown RBP9.62□□□□□ -0.87
BRCC3-206ENST00000399042 TNNC1P63316 161 aa9.62□□□□□ -0.87
BRCC3-206ENST00000399042 ENPEPQ07075 957 aa9.62□□□□□ -0.87
BRCC3-206ENST00000399042 PPP3CAQ08209 521 aa9.62□□□□□ -0.87
BRCC3-206ENST00000399042 LRMPQ12912 555 aa9.62□□□□□ -0.87
BRCC3-206ENST00000399042 EXOC3L4Q17RC7 722 aa9.62□□□□□ -0.87
BRCC3-206ENST00000399042 SGSM1Q2NKQ1 1148 aa9.62□□□□□ -0.87
BRCC3-206ENST00000399042 ZNF699Q32M78 642 aa9.62□□□□□ -0.87
BRCC3-206ENST00000399042 DSTYKQ6XUX3 929 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms